RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 FAM216AQ8WUB2 273 aa7.58□□□□□ -1.2
HERC1-206ENST00000559996 SECTM1Q8WVN6 248 aa7.58□□□□□ -1.2
HERC1-206ENST00000559996 EDARADDQ8WWZ3 215 aa7.58□□□□□ -1.2
HERC1-206ENST00000559996 SLC25A21Q9BQT8 299 aaPredicted RBP7.58□□□□□ -1.2
HERC1-206ENST00000559996 SLC5A7Q9GZV3 580 aa7.58□□□□□ -1.2
HERC1-206ENST00000559996 OR2D2Q9H210 308 aa7.58□□□□□ -1.2
HERC1-206ENST00000559996 SCP2D1Q9UJQ7 156 aa7.58□□□□□ -1.2
HERC1-206ENST00000559996 TRAV40A0A0B4J280 105 aa7.57□□□□□ -1.2
HERC1-206ENST00000559996 LINC00473A8K010 186 aa7.57□□□□□ -1.2
HERC1-206ENST00000559996 CENPXA8MT69 81 aa7.57□□□□□ -1.2
HERC1-206ENST00000559996 HSD17B6O14756 317 aa7.57□□□□□ -1.2
HERC1-206ENST00000559996 RAB29O14966 203 aa7.57□□□□□ -1.2
HERC1-206ENST00000559996 PGLYRP1O75594 196 aaPredicted RBP7.57□□□□□ -1.2
HERC1-206ENST00000559996 ARG1P05089 322 aa7.57□□□□□ -1.2
HERC1-206ENST00000559996 CTSDP07339 412 aaPredicted RBP7.57□□□□□ -1.2
HERC1-206ENST00000559996 VSIG10L2P0DP72 767 aa7.57□□□□□ -1.2
HERC1-206ENST00000559996 RAB7AP51149 207 aa7.57□□□□□ -1.2
HERC1-206ENST00000559996 RND3P61587 244 aa7.57□□□□□ -1.2
HERC1-206ENST00000559996 SUPT4H1P63272 117 aaKnown RBP7.57□□□□□ -1.2
HERC1-206ENST00000559996 RBMS2Q15434 407 aaKnown RBP7.57□□□□□ -1.2
HERC1-206ENST00000559996 MSMO1Q15800 293 aa7.57□□□□□ -1.2
HERC1-206ENST00000559996 FBLN7Q53RD9 439 aa7.57□□□□□ -1.2
HERC1-206ENST00000559996 BCL6BQ8N143 479 aaPredicted RBP7.57□□□□□ -1.2
HERC1-206ENST00000559996 LYG1Q8N1E2 194 aa7.57□□□□□ -1.2
HERC1-206ENST00000559996 ZDHHC22Q8N966 263 aa7.57□□□□□ -1.2
HERC1-206ENST00000559996 OR2AK2Q8NG84 335 aa7.57□□□□□ -1.2
HERC1-206ENST00000559996 DDB2Q92466 427 aa7.57□□□□□ -1.2
HERC1-206ENST00000559996 TOMM40LQ969M1 308 aa7.57□□□□□ -1.2
HERC1-206ENST00000559996 AKR1E2Q96JD6 320 aa7.57□□□□□ -1.2
HERC1-206ENST00000559996 MARVELD1Q9BSK0 173 aa7.57□□□□□ -1.2
HERC1-206ENST00000559996 ALX4Q9H161 411 aaPredicted RBP7.57□□□□□ -1.2
HERC1-206ENST00000559996 MEGF9Q9H1U4 602 aa7.57□□□□□ -1.2
HERC1-206ENST00000559996 TMEM160Q9NX00 188 aa7.57□□□□□ -1.2
HERC1-206ENST00000559996 DPM3Q9P2X0 92 aa7.57□□□□□ -1.2
HERC1-206ENST00000559996 FAM240BA0A1B0GVZ2 78 aa7.56□□□□□ -1.2
HERC1-206ENST00000559996 A0A1W2PPI3 338 aa7.56□□□□□ -1.2
HERC1-206ENST00000559996 FAM90A9PA6NNJ1 464 aa7.56□□□□□ -1.2
HERC1-206ENST00000559996 GPR31O00270 319 aa7.56□□□□□ -1.2
HERC1-206ENST00000559996 NPFFO15130 113 aa7.56□□□□□ -1.2
HERC1-206ENST00000559996 DUTP33316 252 aaKnown RBP7.56□□□□□ -1.2
HERC1-206ENST00000559996 SAA4P35542 130 aa7.56□□□□□ -1.2
HERC1-206ENST00000559996 DEFA1P59665 94 aa7.56□□□□□ -1.2
HERC1-206ENST00000559996 DEFA3P59666 94 aa7.56□□□□□ -1.2
HERC1-206ENST00000559996 ZNF816Q0VGE8 651 aaPredicted RBP7.56□□□□□ -1.2
HERC1-206ENST00000559996 HABP2Q14520 560 aaPredicted RBP7.56□□□□□ -1.2
HERC1-206ENST00000559996 MIDNQ504T8 468 aa7.56□□□□□ -1.2
HERC1-206ENST00000559996 TPTE2P1Q5T6R2 138 aa7.56□□□□□ -1.2
HERC1-206ENST00000559996 MINOS1Q5TGZ0 78 aa7.56□□□□□ -1.2
HERC1-206ENST00000559996 MZT2BQ6NZ67 158 aa7.56□□□□□ -1.2
HERC1-206ENST00000559996 CCBE1Q6UXH8 406 aaPredicted RBP7.56□□□□□ -1.2
HERC1-206ENST00000559996 BRD3OSQ6XYD6 125 aa7.56□□□□□ -1.2
HERC1-206ENST00000559996 C9orf139Q6ZV77 190 aa7.56□□□□□ -1.2
HERC1-206ENST00000559996 SLC25A42Q86VD7 318 aa7.56□□□□□ -1.2
HERC1-206ENST00000559996 SLC38A6Q8IZM9 456 aa7.56□□□□□ -1.2
HERC1-206ENST00000559996 ZNF383Q8NA42 475 aa7.56□□□□□ -1.2
HERC1-206ENST00000559996 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.56□□□□□ -1.2
HERC1-206ENST00000559996 ZBTB34Q8NCN2 500 aa7.56□□□□□ -1.2
HERC1-206ENST00000559996 PIFOQ8TCI5 191 aa7.56□□□□□ -1.2
HERC1-206ENST00000559996 CHPT1Q8WUD6 406 aa7.56□□□□□ -1.2
HERC1-206ENST00000559996 CAPSLQ8WWF8 208 aa7.56□□□□□ -1.2
HERC1-206ENST00000559996 RTN4IP1Q8WWV3 396 aaPredicted RBP7.56□□□□□ -1.2
HERC1-206ENST00000559996 CFHR4Q92496 578 aa7.56□□□□□ -1.2
HERC1-206ENST00000559996 ZNF486Q96H40 463 aaPredicted RBP7.56□□□□□ -1.2
HERC1-206ENST00000559996 NABP2Q9BQ15 211 aa7.56□□□□□ -1.2
HERC1-206ENST00000559996 DPAGT1Q9H3H5 408 aa7.56□□□□□ -1.2
HERC1-206ENST00000559996 GHITMQ9H3K2 345 aa7.56□□□□□ -1.2
HERC1-206ENST00000559996 PIPOXQ9P0Z9 390 aa7.56□□□□□ -1.2
HERC1-206ENST00000559996 KCNS2Q9ULS6 477 aa7.56□□□□□ -1.2
HERC1-206ENST00000559996 TBL2Q9Y4P3 447 aaKnown RBP7.56□□□□□ -1.2
HERC1-206ENST00000559996 MINOS1-NBL1R4GNA1 71 aa7.56□□□□□ -1.2
HERC1-206ENST00000559996 A0A0B4J293 547 aa7.55□□□□□ -1.2
HERC1-206ENST00000559996 A0A0U1RQK1 487 aa7.55□□□□□ -1.2
HERC1-206ENST00000559996 A8MV72 311 aaPredicted RBP7.55□□□□□ -1.2
HERC1-206ENST00000559996 TOR1AO14656 332 aa7.55□□□□□ -1.2
HERC1-206ENST00000559996 ARPC1BO15143 372 aaKnown RBP7.55□□□□□ -1.2
HERC1-206ENST00000559996 MPPED1O15442 326 aa7.55□□□□□ -1.2
HERC1-206ENST00000559996 TNFSF12O43508 249 aa7.55□□□□□ -1.2
HERC1-206ENST00000559996 SLC22A5O76082 557 aa7.55□□□□□ -1.2
HERC1-206ENST00000559996 PTTG1O95997 202 aa7.55□□□□□ -1.2
HERC1-206ENST00000559996 ANXA7P20073 488 aaKnown RBP7.55□□□□□ -1.2
HERC1-206ENST00000559996 HTR1DP28221 377 aa7.55□□□□□ -1.2
HERC1-206ENST00000559996 ECI1P42126 302 aa7.55□□□□□ -1.2
HERC1-206ENST00000559996 GPR12P47775 334 aa7.55□□□□□ -1.2
HERC1-206ENST00000559996 REG1BP48304 166 aa7.55□□□□□ -1.2
HERC1-206ENST00000559996 PIGPP57054 158 aa7.55□□□□□ -1.2
HERC1-206ENST00000559996 HERV-K104P61576 105 aa7.55□□□□□ -1.2
HERC1-206ENST00000559996 RGS21Q2M5E4 152 aa7.55□□□□□ -1.2
HERC1-206ENST00000559996 ZNF585BQ52M93 769 aa7.55□□□□□ -1.2
HERC1-206ENST00000559996 PHLDA2Q53GA4 152 aa7.55□□□□□ -1.2
HERC1-206ENST00000559996 FAM120AOSQ5T036 256 aa7.55□□□□□ -1.2
HERC1-206ENST00000559996 FAM71F2Q6NXP2 309 aa7.55□□□□□ -1.2
HERC1-206ENST00000559996 LPCAT3Q6P1A2 487 aa7.55□□□□□ -1.2
HERC1-206ENST00000559996 GLDNQ6ZMI3 551 aaPredicted RBP7.55□□□□□ -1.2
HERC1-206ENST00000559996 IL17RELQ6ZVW7 336 aa7.55□□□□□ -1.2
HERC1-206ENST00000559996 CENPSQ8N2Z9 138 aa7.55□□□□□ -1.2
HERC1-206ENST00000559996 DRAXINQ8NBI3 349 aaPredicted RBP7.55□□□□□ -1.2
HERC1-206ENST00000559996 OR5AN1Q8NGI8 311 aa7.55□□□□□ -1.2
HERC1-206ENST00000559996 ZFAND1Q8TCF1 268 aa7.55□□□□□ -1.2
HERC1-206ENST00000559996 MALSU1Q96EH3 234 aa7.55□□□□□ -1.2
HERC1-206ENST00000559996 RITA1Q96K30 269 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms