RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 ATP6V1G1O75348 118 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 ZFPL1O95159 310 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 CYB5AP00167 134 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 IGHG2P01859 326 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 EIF4EP06730 217 aaKnown RBP4.54□□□□□ -1.68
USP3-215ENST00000559771 FAM106CPP0CH98 169 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 CD37P11049 281 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 ZNF44P15621 663 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 NFYBP25208 207 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 SSTR5P35346 364 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 CEACAM3P40198 252 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 MYCNOSP40205 109 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 PRRX1P54821 245 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 RRAS2P62070 204 aaPredicted RBP4.54□□□□□ -1.68
USP3-215ENST00000559771 MRPS15P82914 257 aaKnown RBP4.54□□□□□ -1.68
USP3-215ENST00000559771 PAX5Q02548 391 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 CFHR3Q02985 330 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 CD69Q07108 199 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 RBM39Q14498 530 aaKnown RBP4.54□□□□□ -1.68
USP3-215ENST00000559771 HNF4GQ14541 408 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 P2RY14Q15391 338 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 KISS1Q15726 138 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 DEFB136Q30KP8 78 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 KHDC1LQ5JSQ8 128 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 ZNF57Q68EA5 555 aaPredicted RBP4.54□□□□□ -1.68
USP3-215ENST00000559771 ELP2Q6IA86 826 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 NOXA1Q86UR1 476 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 NR2C2APQ86WQ0 139 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 STPG2Q8N412 459 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 TOMM5Q8N4H5 51 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 RNF152Q8N8N0 203 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 CHST4Q8NCG5 386 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 TMEM104Q8NE00 496 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 OR4D6Q8NGJ1 314 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 RFESDQ8TAC1 157 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 SMIM4Q8WVI0 70 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 RGP1Q92546 391 aaPredicted RBP4.54□□□□□ -1.68
USP3-215ENST00000559771 TOMM40LQ969M1 308 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 CYYR1Q96J86 154 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 HYLS1Q96M11 299 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 NEDD4LQ96PU5 975 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 DERL3Q96Q80 235 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 NCOR1P1Q9H4R4 102 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 RHOFQ9HBH0 211 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.54□□□□□ -1.68
USP3-215ENST00000559771 MCUBQ9NWR8 336 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 CALYQ9NYX4 217 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 IDI2-AS1Q9NZ38 188 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 ZNF107Q9UII5 783 aaPredicted RBP4.54□□□□□ -1.68
USP3-215ENST00000559771 KIF25Q9UIL4 384 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 SACSQ9NZJ4 4579 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 STAB2Q8WWQ8 2551 aa4.54□□□□□ -1.68
USP3-215ENST00000559771 MEIKINA0A087WXM9 373 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 ZNF736B4DX44 427 aaPredicted RBP4.53□□□□□ -1.68
USP3-215ENST00000559771 C15orf65H3BRN8 121 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 M0QZK8 103 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 HSPB6O14558 160 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 FGF16O43320 207 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 IGKV1D-33P01593 117 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 IGKV1-33P01594 117 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 C1QBP02746 253 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 CD2P06729 351 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 ARSBP15848 533 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 TMEM11P17152 192 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 FAUP35544 74 aaKnown RBP4.53□□□□□ -1.68
USP3-215ENST00000559771 GLP1RP43220 463 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 GNG10P50151 68 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 LUMP51884 338 aaPredicted RBP4.53□□□□□ -1.68
USP3-215ENST00000559771 OR10A3P58181 314 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 CD300CQ08708 224 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 ZNF816Q0VGE8 651 aaPredicted RBP4.53□□□□□ -1.68
USP3-215ENST00000559771 KIAA0141Q14154 515 aaPredicted RBP4.53□□□□□ -1.68
USP3-215ENST00000559771 GPR176Q14439 515 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 INSL4Q14641 139 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 CDK10Q15131 360 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 PIGYQ3MUY2 71 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 CCDC144NLQ6NUI1 221 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 ASCL4Q6XD76 172 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 ZNF695Q8IW36 515 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 Q8N9W7 124 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 BVESQ8NE79 360 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 KLHL30-AS1Q8NEE0 82 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 PXT1Q8NFP0 134 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 OR51A2Q8NGJ7 313 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 OR13C3Q8NGS6 347 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 OR10K1Q8NGX5 313 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 MRGPRDQ8TDS7 321 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 FCAMRQ8WWV6 532 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 ASB13Q8WXK3 278 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 ST6GALNAC6Q969X2 333 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 PTX4Q96A99 478 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 RPEQ96AT9 228 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 OR14A2Q96R54 314 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 PRR25Q96S07 402 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 ABHD1Q96SE0 405 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 PDCD1LG2Q9BQ51 273 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 DIABLOQ9NR28 239 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 ZFP57Q9NU63 452 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 GFOD1Q9NXC2 390 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 OR6C3Q9NZP0 311 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms