RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 IGHV2-70DA0A0C4DH43 119 aa13.56□□□□□ -0.24
TPM1-219ENST00000559397 KBTBD11-OT1A0A1B0GTJ5 212 aa13.56□□□□□ -0.24
TPM1-219ENST00000559397 C13orf42A0A1B0GVH6 325 aa13.56□□□□□ -0.24
TPM1-219ENST00000559397 hADV38S2A0JD32 116 aa13.56□□□□□ -0.24
TPM1-219ENST00000559397 H0Y980 276 aa13.56□□□□□ -0.24
TPM1-219ENST00000559397 B3GALNT1O75752 331 aa13.56□□□□□ -0.24
TPM1-219ENST00000559397 SNAPC5O75971 98 aa13.56□□□□□ -0.24
TPM1-219ENST00000559397 PPIAL4GP0DN37 164 aa13.56□□□□□ -0.24
TPM1-219ENST00000559397 UCP1P25874 307 aa13.56□□□□□ -0.24
TPM1-219ENST00000559397 S100GP29377 79 aa13.56□□□□□ -0.24
TPM1-219ENST00000559397 PPP1CCP36873 323 aaKnown RBP13.56□□□□□ -0.24
TPM1-219ENST00000559397 LOXL3P58215 753 aa13.56□□□□□ -0.24
TPM1-219ENST00000559397 ZBTB34Q8NCN2 500 aa13.56□□□□□ -0.24
TPM1-219ENST00000559397 LHFPL5Q8TAF8 219 aa13.56□□□□□ -0.24
TPM1-219ENST00000559397 PPP1R1CQ8WVI7 109 aa13.56□□□□□ -0.24
TPM1-219ENST00000559397 OR10C1Q96KK4 312 aa13.56□□□□□ -0.24
TPM1-219ENST00000559397 C2orf50Q96LR7 162 aa13.56□□□□□ -0.24
TPM1-219ENST00000559397 LPAR3Q9UBY5 353 aa13.56□□□□□ -0.24
TPM1-219ENST00000559397 LINC00312Q9Y6C7 94 aa13.56□□□□□ -0.24
TPM1-219ENST00000559397 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.55□□□□□ -0.245e-6■■■□□ 16.3
TPM1-219ENST00000559397 TRGV10A0A0A0MS01 117 aa13.55□□□□□ -0.24
TPM1-219ENST00000559397 MEX3AA1L020 520 aaKnown RBP13.55□□□□□ -0.24
TPM1-219ENST00000559397 YPEL1O60688 119 aa13.55□□□□□ -0.24
TPM1-219ENST00000559397 SLC25A4P12235 298 aa13.55□□□□□ -0.24
TPM1-219ENST00000559397 F2RP25116 425 aa13.55□□□□□ -0.24
TPM1-219ENST00000559397 GGNBP1Q5YKI7 109 aa13.55□□□□□ -0.24
TPM1-219ENST00000559397 TMEM65Q6PI78 240 aa13.55□□□□□ -0.24
TPM1-219ENST00000559397 DRAM1Q8N682 238 aa13.55□□□□□ -0.24
TPM1-219ENST00000559397 YPEL2Q96QA6 119 aa13.55□□□□□ -0.24
TPM1-219ENST00000559397 GPHA2Q96T91 129 aa13.55□□□□□ -0.24
TPM1-219ENST00000559397 UBE2J1Q9Y385 318 aaPredicted RBP13.55□□□□□ -0.24
TPM1-219ENST00000559397 ZNF729A6NN14 1252 aaPredicted RBP13.54□□□□□ -0.24
TPM1-219ENST00000559397 ENSAO43768 121 aaKnown RBP13.54□□□□□ -0.24
TPM1-219ENST00000559397 CDS2O95674 445 aa13.54□□□□□ -0.24
TPM1-219ENST00000559397 IFNA21P01568 189 aa13.54□□□□□ -0.24
TPM1-219ENST00000559397 DLX6P56179 175 aa13.54□□□□□ -0.24
TPM1-219ENST00000559397 ZNF645Q8N7E2 425 aa13.54□□□□□ -0.24
TPM1-219ENST00000559397 AGMATQ9BSE5 352 aa13.54□□□□□ -0.24
TPM1-219ENST00000559397 COMMD9Q9P000 198 aa13.54□□□□□ -0.24
TPM1-219ENST00000559397 RBM7Q9Y580 266 aaKnown RBP13.54□□□□□ -0.24
TPM1-219ENST00000559397 INSIG2Q9Y5U4 225 aa13.54□□□□□ -0.24
TPM1-219ENST00000559397 IGHV3-43A0A0B4J1X8 118 aa13.53□□□□□ -0.24
TPM1-219ENST00000559397 TRAV20A0A0B4J274 112 aa13.53□□□□□ -0.24
TPM1-219ENST00000559397 ITGB1BP1O14713 200 aa13.53□□□□□ -0.24
TPM1-219ENST00000559397 LIPFP07098 398 aa13.53□□□□□ -0.24
TPM1-219ENST00000559397 IGHV3-43DP0DP04 118 aa13.53□□□□□ -0.24
TPM1-219ENST00000559397 CCL3L1P16619 93 aa13.53□□□□□ -0.24
TPM1-219ENST00000559397 PSMB6P28072 239 aa13.53□□□□□ -0.24
TPM1-219ENST00000559397 KRTAP1-1Q07627 177 aa13.53□□□□□ -0.24
TPM1-219ENST00000559397 EIF4EBP1Q13541 118 aaPredicted RBP13.53□□□□□ -0.24
TPM1-219ENST00000559397 TMEM30BQ3MIR4 351 aa13.53□□□□□ -0.24
TPM1-219ENST00000559397 MORN2Q502X0 79 aa13.53□□□□□ -0.24
TPM1-219ENST00000559397 CYB5R2Q6BCY4 276 aa13.53□□□□□ -0.24
TPM1-219ENST00000559397 C11orf87Q6NUJ2 197 aa13.53□□□□□ -0.24
TPM1-219ENST00000559397 LYZL2Q7Z4W2 148 aa13.53□□□□□ -0.24
TPM1-219ENST00000559397 EDARADDQ8WWZ3 215 aa13.53□□□□□ -0.24
TPM1-219ENST00000559397 IL22RA2Q969J5 263 aa13.53□□□□□ -0.24
TPM1-219ENST00000559397 TMEM186Q96B77 213 aa13.53□□□□□ -0.24
TPM1-219ENST00000559397 TMUB1Q9BVT8 246 aa13.53□□□□□ -0.24
TPM1-219ENST00000559397 TNFSF12O43508 249 aa13.53□□□□□ -0.24
TPM1-219ENST00000559397 MPC2O95563 127 aa13.53□□□□□ -0.24
TPM1-219ENST00000559397 CXCL2P19875 107 aa13.53□□□□□ -0.24
TPM1-219ENST00000559397 DVL1P1P54792 670 aaPredicted RBP13.53□□□□□ -0.24
TPM1-219ENST00000559397 SELENOHQ8IZQ5 122 aaKnown RBP13.53□□□□□ -0.24
TPM1-219ENST00000559397 C11orf42Q8N5U0 333 aa13.53□□□□□ -0.24
TPM1-219ENST00000559397 C5orf30Q96GV9 206 aa13.53□□□□□ -0.24
TPM1-219ENST00000559397 ZNF714Q96N38 554 aa13.53□□□□□ -0.24
TPM1-219ENST00000559397 GON7Q9BXV9 100 aa13.53□□□□□ -0.24
TPM1-219ENST00000559397 HIF1ANQ9NWT6 349 aa13.53□□□□□ -0.24
TPM1-219ENST00000559397 TAS2R3Q9NYW6 316 aa13.53□□□□□ -0.24
TPM1-219ENST00000559397 KCNS2Q9ULS6 477 aa13.53□□□□□ -0.24
TPM1-219ENST00000559397 TMED3Q9Y3Q3 217 aa13.53□□□□□ -0.24
TPM1-219ENST00000559397 ABCA1O95477 2261 aa13.52□□□□□ -0.24
TPM1-219ENST00000559397 DUXBA0A1W2PPF3 345 aa13.52□□□□□ -0.25
TPM1-219ENST00000559397 RGS13O14921 159 aa13.52□□□□□ -0.25
TPM1-219ENST00000559397 TGFAP01135 160 aa13.52□□□□□ -0.25
TPM1-219ENST00000559397 PAX8Q06710 450 aa13.52□□□□□ -0.25
TPM1-219ENST00000559397 TMEM268Q5VZI3 342 aa13.52□□□□□ -0.25
TPM1-219ENST00000559397 BTNL3Q6UXE8 466 aa13.52□□□□□ -0.25
TPM1-219ENST00000559397 OR52M1Q8NGK5 317 aa13.52□□□□□ -0.25
TPM1-219ENST00000559397 OR2D2Q9H210 308 aa13.52□□□□□ -0.25
TPM1-219ENST00000559397 SLA2Q9H6Q3 261 aa13.52□□□□□ -0.25
TPM1-219ENST00000559397 GFOD1Q9NXC2 390 aa13.52□□□□□ -0.25
TPM1-219ENST00000559397 GNG12Q9UBI6 72 aa13.52□□□□□ -0.25
TPM1-219ENST00000559397 RNF150Q9ULK6 438 aa13.52□□□□□ -0.25
TPM1-219ENST00000559397 WNK2Q9Y3S1 2297 aa13.51□□□□□ -0.25
TPM1-219ENST00000559397 FXYD6-FXYD2A0A087WZ82 144 aa13.51□□□□□ -0.25
TPM1-219ENST00000559397 A0A1W2PPH5 198 aa13.51□□□□□ -0.25
TPM1-219ENST00000559397 C17orf98A8MV24 154 aa13.51□□□□□ -0.25
TPM1-219ENST00000559397 RPA2P15927 270 aa13.51□□□□□ -0.25
TPM1-219ENST00000559397 ZNF16P17020 682 aaPredicted RBP13.51□□□□□ -0.25
TPM1-219ENST00000559397 ERVFRD-1P60508 538 aa13.51□□□□□ -0.25
TPM1-219ENST00000559397 ARF6P62330 175 aa13.51□□□□□ -0.25
TPM1-219ENST00000559397 LTC4SQ16873 150 aa13.51□□□□□ -0.25
TPM1-219ENST00000559397 IAH1Q2TAA2 248 aaPredicted RBP13.51□□□□□ -0.25
TPM1-219ENST00000559397 KIR3DL3Q8N743 410 aa13.51□□□□□ -0.25
TPM1-219ENST00000559397 Q8N7P7 452 aa13.51□□□□□ -0.25
TPM1-219ENST00000559397 SLC35G3Q8N808 338 aa13.51□□□□□ -0.25
TPM1-219ENST00000559397 RNF126Q9BV68 326 aa13.51□□□□□ -0.25
TPM1-219ENST00000559397 IDI2-AS1Q9NZ38 188 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms