RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 RAB2BQ8WUD1 216 aa14.83□□□□□ -0.04
CASC4-209ENST00000559222 ISOC1Q96CN7 298 aa14.83□□□□□ -0.04
CASC4-209ENST00000559222 AKR1E2Q96JD6 320 aa14.83□□□□□ -0.04
CASC4-209ENST00000559222 MIXL1Q9H2W2 232 aa14.83□□□□□ -0.04
CASC4-209ENST00000559222 CEPT1Q9Y6K0 416 aa14.83□□□□□ -0.04
CASC4-209ENST00000559222 TET2Q6N021 2002 aaPredicted RBP14.83□□□□□ -0.04
CASC4-209ENST00000559222 IGKV1D-13A0A0B4J2D9 117 aa14.82□□□□□ -0.04
CASC4-209ENST00000559222 NCBP2LA6PVI3 153 aaKnown RBP14.82□□□□□ -0.04
CASC4-209ENST00000559222 H0YJW9 148 aa14.82□□□□□ -0.04
CASC4-209ENST00000559222 DIRAS3O95661 229 aa14.82□□□□□ -0.04
CASC4-209ENST00000559222 APOA1P02647 267 aa14.82□□□□□ -0.04
CASC4-209ENST00000559222 IGKV1-13P0DP09 117 aa14.82□□□□□ -0.04
CASC4-209ENST00000559222 TMBIM6P55061 237 aa14.82□□□□□ -0.04
CASC4-209ENST00000559222 CNIH2Q6PI25 160 aa14.82□□□□□ -0.04
CASC4-209ENST00000559222 DYNC2LI1Q8TCX1 351 aa14.82□□□□□ -0.04
CASC4-209ENST00000559222 ACOT12Q8WYK0 555 aa14.82□□□□□ -0.04
CASC4-209ENST00000559222 S1PR3Q99500 378 aa14.82□□□□□ -0.04
CASC4-209ENST00000559222 SDHAF2Q9NX18 166 aa14.82□□□□□ -0.04
CASC4-209ENST00000559222 SCOCQ9UIL1 159 aa14.82□□□□□ -0.04
CASC4-209ENST00000559222 ZNF221Q9UK13 617 aa14.82□□□□□ -0.04
CASC4-209ENST00000559222 M0R1X1 148 aa14.81□□□□□ -0.04
CASC4-209ENST00000559222 FGF16O43320 207 aa14.81□□□□□ -0.04
CASC4-209ENST00000559222 CD28P10747 220 aa14.81□□□□□ -0.04
CASC4-209ENST00000559222 ACTBP60709 375 aa14.81□□□□□ -0.04
CASC4-209ENST00000559222 FAM71E2Q8N5Q1 922 aa14.81□□□□□ -0.04
CASC4-209ENST00000559222 NOL4LQ96MY1 436 aaPredicted RBP14.81□□□□□ -0.04
CASC4-209ENST00000559222 HSPB9Q9BQS6 159 aa14.81□□□□□ -0.04
CASC4-209ENST00000559222 LINC00527Q9UJ94 153 aa14.81□□□□□ -0.04
CASC4-209ENST00000559222 ANAPC10Q9UM13 185 aa14.81□□□□□ -0.04
CASC4-209ENST00000559222 MRPS7Q9Y2R9 242 aaKnown RBP14.81□□□□□ -0.04
CASC4-209ENST00000559222 CMYA5Q8N3K9 4069 aa14.81□□□□□ -0.04
CASC4-209ENST00000559222 M0QZK8 103 aa14.8□□□□□ -0.04
CASC4-209ENST00000559222 MMDQ15546 238 aa14.8□□□□□ -0.04
CASC4-209ENST00000559222 RNASE12Q5GAN4 147 aaKnown RBP14.8□□□□□ -0.04
CASC4-209ENST00000559222 SNX29P2Q8IUI4 249 aa14.8□□□□□ -0.04
CASC4-209ENST00000559222 LAX1Q8IWV1 398 aa14.8□□□□□ -0.04
CASC4-209ENST00000559222 RBM38Q9H0Z9 239 aaKnown RBP14.8□□□□□ -0.04
CASC4-209ENST00000559222 FAM25AB3EWG3 89 aa14.79□□□□□ -0.04
CASC4-209ENST00000559222 FAM25CB3EWG5 89 aa14.79□□□□□ -0.04
CASC4-209ENST00000559222 FAM25GB3EWG6 89 aa14.79□□□□□ -0.04
CASC4-209ENST00000559222 CTDSP2O14595 271 aa14.79□□□□□ -0.04
CASC4-209ENST00000559222 TUSC2O75896 110 aa14.79□□□□□ -0.04
CASC4-209ENST00000559222 MZT2AQ6P582 158 aa14.79□□□□□ -0.04
CASC4-209ENST00000559222 OR5AN1Q8NGI8 311 aa14.79□□□□□ -0.04
CASC4-209ENST00000559222 CMTM3Q96MX0 182 aa14.79□□□□□ -0.04
CASC4-209ENST00000559222 TRRAPQ9Y4A5 3859 aa14.79□□□□□ -0.04
CASC4-209ENST00000559222 OR5H14A6NHG9 310 aa14.78□□□□□ -0.04
CASC4-209ENST00000559222 PEX14O75381 377 aa14.78□□□□□ -0.04
CASC4-209ENST00000559222 TSPAN15O95858 294 aa14.78□□□□□ -0.04
CASC4-209ENST00000559222 IGLV2-14P01704 120 aa14.78□□□□□ -0.04
CASC4-209ENST00000559222 IGKV1-16P04430 117 aa14.78□□□□□ -0.04
CASC4-209ENST00000559222 AADACP22760 399 aa14.78□□□□□ -0.04
CASC4-209ENST00000559222 ARPC4P59998 168 aa14.78□□□□□ -0.04
CASC4-209ENST00000559222 TCTEX1D4Q5JR98 221 aa14.78□□□□□ -0.04
CASC4-209ENST00000559222 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.78□□□□□ -0.04
CASC4-209ENST00000559222 GPX8Q8TED1 209 aa14.78□□□□□ -0.04
CASC4-209ENST00000559222 AP3S1Q92572 193 aa14.78□□□□□ -0.04
CASC4-209ENST00000559222 BCL7BQ9BQE9 202 aa14.78□□□□□ -0.04
CASC4-209ENST00000559222 IFT46Q9NQC8 304 aa14.78□□□□□ -0.04
CASC4-209ENST00000559222 CCDC59Q9P031 241 aaKnown RBP14.78□□□□□ -0.04
CASC4-209ENST00000559222 EXTL2Q9UBQ6 330 aa14.78□□□□□ -0.04
CASC4-209ENST00000559222 WASHC3Q9Y3C0 194 aa14.78□□□□□ -0.04
CASC4-209ENST00000559222 OR2W1Q9Y3N9 320 aa14.78□□□□□ -0.04
CASC4-209ENST00000559222 RBM7Q9Y580 266 aaKnown RBP14.78□□□□□ -0.04
CASC4-209ENST00000559222 LINC00473A8K010 186 aa14.77□□□□□ -0.05
CASC4-209ENST00000559222 H7C2Y5 167 aa14.77□□□□□ -0.05
CASC4-209ENST00000559222 IGHG2P01859 326 aa14.77□□□□□ -0.05
CASC4-209ENST00000559222 CTXN2P0C2S0 81 aa14.77□□□□□ -0.05
CASC4-209ENST00000559222 PRSS3P35030 304 aa14.77□□□□□ -0.05
CASC4-209ENST00000559222 CBX5P45973 191 aa14.77□□□□□ -0.05
CASC4-209ENST00000559222 GPHA2Q96T91 129 aa14.77□□□□□ -0.05
CASC4-209ENST00000559222 LIN7CQ9NUP9 197 aaKnown RBP14.77□□□□□ -0.05
CASC4-209ENST00000559222 ZNF107Q9UII5 783 aaPredicted RBP14.77□□□□□ -0.05
CASC4-209ENST00000559222 ADARB2-AS1A8MUL3 147 aa14.76□□□□□ -0.05
CASC4-209ENST00000559222 NBR2O15453 112 aa14.76□□□□□ -0.05
CASC4-209ENST00000559222 FBXO24O75426 580 aa14.76□□□□□ -0.05
CASC4-209ENST00000559222 NDUFA3O95167 84 aa14.76□□□□□ -0.05
CASC4-209ENST00000559222 FCGR2CP31995 323 aa14.76□□□□□ -0.05
CASC4-209ENST00000559222 LUMP51884 338 aaPredicted RBP14.76□□□□□ -0.05
CASC4-209ENST00000559222 SLC35E3Q7Z769 313 aa14.76□□□□□ -0.05
CASC4-209ENST00000559222 CITED2Q99967 270 aaPredicted RBP14.76□□□□□ -0.05
CASC4-209ENST00000559222 RASL11BQ9BPW5 248 aa14.76□□□□□ -0.05
CASC4-209ENST00000559222 SLIRPQ9GZT3 109 aaKnown RBP14.76□□□□□ -0.05
CASC4-209ENST00000559222 GHITMQ9H3K2 345 aa14.76□□□□□ -0.05
CASC4-209ENST00000559222 FBXL15Q9H469 300 aa14.76□□□□□ -0.05
CASC4-209ENST00000559222 TPSG1Q9NRR2 321 aa14.76□□□□□ -0.05
CASC4-209ENST00000559222 SLC35D1Q9NTN3 355 aa14.76□□□□□ -0.05
CASC4-209ENST00000559222 GAB2Q9UQC2 676 aa14.76□□□□□ -0.05
CASC4-209ENST00000559222 PLXNB1O43157 2135 aa14.75□□□□□ -0.05
CASC4-209ENST00000559222 NOL3O60936 208 aaKnown RBP14.75□□□□□ -0.05
CASC4-209ENST00000559222 PMP2P02689 132 aa14.75□□□□□ -0.05
CASC4-209ENST00000559222 OR5H8P0DN80 308 aa14.75□□□□□ -0.05
CASC4-209ENST00000559222 NAT1P18440 290 aa14.75□□□□□ -0.05
CASC4-209ENST00000559222 DUTP33316 252 aaKnown RBP14.75□□□□□ -0.05
CASC4-209ENST00000559222 SOX6P35712 828 aa14.75□□□□□ -0.05
CASC4-209ENST00000559222 RFX2P48378 723 aa14.75□□□□□ -0.05
CASC4-209ENST00000559222 RPL30P62888 115 aaKnown RBP14.75□□□□□ -0.05
CASC4-209ENST00000559222 NDPQ00604 133 aa14.75□□□□□ -0.05
CASC4-209ENST00000559222 CDK10Q15131 360 aa14.75□□□□□ -0.05
CASC4-209ENST00000559222 ZNF329Q86UD4 541 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms