RNA–Protein interactions for RNA: ENST00000559175.1

CTDSPL2-206, Transcript of CTD small phosphatase like 2, humanhuman

TSL 2

Gene CTDSPL2, Length 3,609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-206ENST00000559175 HIST1H2BKO60814 126 aa4.8□□□□□ -1.64
CTDSPL2-206ENST00000559175 APOA2P02652 100 aa4.8□□□□□ -1.64
CTDSPL2-206ENST00000559175 HIST1H2BJP06899 126 aa4.8□□□□□ -1.64
CTDSPL2-206ENST00000559175 SLC35G6P0C7Q6 338 aa4.8□□□□□ -1.64
CTDSPL2-206ENST00000559175 ERGP11308 486 aa4.8□□□□□ -1.64
CTDSPL2-206ENST00000559175 CXCL3P19876 107 aa4.8□□□□□ -1.64
CTDSPL2-206ENST00000559175 HIST1H2BOP23527 126 aa4.8□□□□□ -1.64
CTDSPL2-206ENST00000559175 HIST1H2BBP33778 126 aa4.8□□□□□ -1.64
CTDSPL2-206ENST00000559175 SSR4P51571 173 aa4.8□□□□□ -1.64
CTDSPL2-206ENST00000559175 GP2P55259 537 aaKnown RBP4.8□□□□□ -1.64
CTDSPL2-206ENST00000559175 CTBP2P56545 445 aa4.8□□□□□ -1.64
CTDSPL2-206ENST00000559175 HIST1H2BDP58876 126 aa4.8□□□□□ -1.64
CTDSPL2-206ENST00000559175 HIST1H2BCP62807 126 aa4.8□□□□□ -1.64
CTDSPL2-206ENST00000559175 HIST2H2BEQ16778 126 aa4.8□□□□□ -1.64
CTDSPL2-206ENST00000559175 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.8□□□□□ -1.64
CTDSPL2-206ENST00000559175 ZNF57Q68EA5 555 aaPredicted RBP4.8□□□□□ -1.64
CTDSPL2-206ENST00000559175 TRIM40Q6P9F5 258 aa4.8□□□□□ -1.64
CTDSPL2-206ENST00000559175 C16orf82Q7Z2V1 217 aa4.8□□□□□ -1.64
CTDSPL2-206ENST00000559175 TMEM178AQ8NBL3 297 aa4.8□□□□□ -1.64
CTDSPL2-206ENST00000559175 C8orf46Q8TAG6 207 aa4.8□□□□□ -1.64
CTDSPL2-206ENST00000559175 NEIL3Q8TAT5 605 aa4.8□□□□□ -1.64
CTDSPL2-206ENST00000559175 OR5P3Q8WZ94 311 aa4.8□□□□□ -1.64
CTDSPL2-206ENST00000559175 HIST1H2BHQ93079 126 aa4.8□□□□□ -1.64
CTDSPL2-206ENST00000559175 SPACA5Q96QH8 159 aa4.8□□□□□ -1.64
CTDSPL2-206ENST00000559175 HIST1H2BNQ99877 126 aa4.8□□□□□ -1.64
CTDSPL2-206ENST00000559175 HIST1H2BMQ99879 126 aa4.8□□□□□ -1.64
CTDSPL2-206ENST00000559175 PDCD1LG2Q9BQ51 273 aa4.8□□□□□ -1.64
CTDSPL2-206ENST00000559175 PRNDQ9UKY0 176 aa4.8□□□□□ -1.64
CTDSPL2-206ENST00000559175 CHST2Q9Y4C5 530 aa4.8□□□□□ -1.64
CTDSPL2-206ENST00000559175 FAM236DA0A1B0GTK5 79 aa4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 TNFSF13O75888 250 aa4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 FAM236CP0DP71 79 aa4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 SNCAP37840 140 aa4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 TSFMP43897 325 aaKnown RBP4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 HIST3H3Q16695 136 aa4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 OR2T5Q6IEZ7 315 aa4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 ZNF549Q6P9A3 640 aa4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 H2AFVQ71UI9 128 aa4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 TGIF2LYQ8IUE0 185 aa4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 CA13Q8N1Q1 262 aa4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 OR2T29Q8NH02 315 aa4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 TMEM106AQ96A25 262 aa4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 TSSK6Q9BXA6 273 aa4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 OR2H1Q9GZK4 316 aa4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 R3HDMLQ9H3Y0 253 aa4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 NTNG1Q9Y2I2 539 aa4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 PAM16Q9Y3D7 125 aa4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 TNFRSF11BO00300 401 aa4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 LYRM1O43325 122 aa4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 WNT1P04628 370 aa4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 HTR1EP28566 365 aa4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 SLC18A1P54219 525 aa4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 HMGN3Q15651 99 aa4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 LEG1Q6P5S2 330 aa4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 Q75L30 129 aa4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 OR51A2Q8NGJ7 313 aa4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 MZB1Q8WU39 189 aa4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 MRPL45Q9BRJ2 306 aaKnown RBP4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 EDA2RQ9HAV5 297 aa4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 NOX3Q9HBY0 568 aa4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 FER1L5A0AVI2 2057 aa4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 LOC107984640A0A0U1RRK4 108 aa4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 SOCS2O14508 198 aa4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 IGHG3P01860 377 aa4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 TTRP02766 147 aa4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 LGALS2P05162 132 aa4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 LOXP28300 417 aaPredicted RBP4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 SUB1P53999 127 aaKnown RBP eCLIP4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 GABARAPL2P60520 117 aa4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 GINS1Q14691 196 aa4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 ZNF672Q499Z4 452 aaPredicted RBP4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 RAB6CQ53S08 254 aa4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 HRCT1Q6UXD1 115 aa4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 HSD17B10Q99714 261 aaKnown RBP4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 RAB6CQ9H0N0 254 aa4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 SEC61A2Q9H9S3 476 aa4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 KCNE5Q9UJ90 142 aa4.79□□□□□ -1.64
CTDSPL2-206ENST00000559175 C7orf77A4D0Y5 90 aa4.78□□□□□ -1.64
CTDSPL2-206ENST00000559175 H0YIZ8 118 aa4.78□□□□□ -1.64
CTDSPL2-206ENST00000559175 CCL21O00585 134 aa4.78□□□□□ -1.64
CTDSPL2-206ENST00000559175 PSG2P11465 335 aa4.78□□□□□ -1.64
CTDSPL2-206ENST00000559175 FGF3P11487 239 aaPredicted RBP4.78□□□□□ -1.64
CTDSPL2-206ENST00000559175 CATR1Q13166 79 aa4.78□□□□□ -1.64
CTDSPL2-206ENST00000559175 DHRS2Q13268 280 aa4.78□□□□□ -1.64
CTDSPL2-206ENST00000559175 LAGE3Q14657 143 aa4.78□□□□□ -1.64
CTDSPL2-206ENST00000559175 MEIG1Q5JSS6 88 aa4.78□□□□□ -1.64
CTDSPL2-206ENST00000559175 C10orf91Q5T1B1 145 aa4.78□□□□□ -1.64
CTDSPL2-206ENST00000559175 SFXN4Q6P4A7 337 aa4.78□□□□□ -1.64
CTDSPL2-206ENST00000559175 TMEM183AQ8IXX5 376 aa4.78□□□□□ -1.64
CTDSPL2-206ENST00000559175 TMEM86BQ8N661 226 aa4.78□□□□□ -1.64
CTDSPL2-206ENST00000559175 PLPP5Q8NEB5 264 aa4.78□□□□□ -1.64
CTDSPL2-206ENST00000559175 OR11H7Q8NGC8 314 aa4.78□□□□□ -1.64
CTDSPL2-206ENST00000559175 OR5D16Q8NGK9 328 aa4.78□□□□□ -1.64
CTDSPL2-206ENST00000559175 PP6455Q8WZ26 134 aa4.78□□□□□ -1.64
CTDSPL2-206ENST00000559175 TSPAN32Q96QS1 320 aa4.78□□□□□ -1.64
CTDSPL2-206ENST00000559175 PNRC2Q9NPJ4 139 aaKnown RBP4.78□□□□□ -1.64
CTDSPL2-206ENST00000559175 UQCR10Q9UDW1 63 aa4.78□□□□□ -1.64
CTDSPL2-206ENST00000559175 HS3ST2Q9Y278 367 aa4.78□□□□□ -1.64
CTDSPL2-206ENST00000559175 LOC102725191A0A1B0GVB3 256 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms