RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 MMP24Q9Y5R2 645 aa7.74□□□□□ -1.17
SPG11-214ENST00000558989 V9GY05 133 aa7.74□□□□□ -1.17
SPG11-214ENST00000558989 IGHV3-72A0A0B4J1Y9 119 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 A0A0B4J293 547 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 A0A1B0GUS0 222 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 FAM240BA0A1B0GVZ2 78 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 A0A1W2PRX2 142 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 SLC17A2O00624 439 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 SLC31A2O15432 143 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 HBZP02008 142 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 CD34P28906 385 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 VEGFCP49767 419 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 CNN1P51911 297 aaKnown RBP7.73□□□□□ -1.17
SPG11-214ENST00000558989 PROK1P58294 105 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 BLCAPP62952 87 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 HES1Q14469 280 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 SPANXN2Q5MJ10 180 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 OR52L2PQ8NGH6 319 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 OR56B4Q8NH76 319 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 OR2T6Q8NHC8 308 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 MRPL30Q8TCC3 161 aaKnown RBP7.73□□□□□ -1.17
SPG11-214ENST00000558989 SPAG8Q99932 426 aaPredicted RBP7.73□□□□□ -1.17
SPG11-214ENST00000558989 HDHD3Q9BSH5 251 aaPredicted RBP7.73□□□□□ -1.17
SPG11-214ENST00000558989 NPFFR1Q9GZQ6 430 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 TAF9BQ9HBM6 251 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 RAB18Q9NP72 206 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 PLEKHJ1Q9NW61 149 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 FAM30AQ9NZY2 134 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 GHRLQ9UBU3 117 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 TRRAPQ9Y4A5 3859 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 FAM90A10PA6NDY2 464 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 TMEM14DPA8MWL7 114 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 SPINT2O43291 252 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 SLC2A2P11168 524 aaPredicted RBP7.73□□□□□ -1.17
SPG11-214ENST00000558989 CHATP28329 748 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 BRS3P32247 399 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 MNDAP41218 407 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 ZNF134P52741 427 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 GNMTQ14749 295 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 C6orf183Q5T699 404 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 UBE2UQ5VVX9 321 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 ZNF773Q6PK81 442 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 MOB3BQ86TA1 216 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 LYG1Q8N1E2 194 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 DRAM1Q8N682 238 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 KLHDC1Q8N7A1 406 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 IL1F10Q8WWZ1 152 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 FAM3DQ96BQ1 224 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 SLC25A33Q9BSK2 321 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 LPAR5Q9H1C0 372 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 OR51E2Q9H255 320 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 RNF167Q9H6Y7 350 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 KCNIP1Q9NZI2 227 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 PITPNC1Q9UKF7 332 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 FOXA2Q9Y261 457 aaPredicted RBP7.73□□□□□ -1.17
SPG11-214ENST00000558989 AMMECR1Q9Y4X0 333 aaPredicted RBP7.73□□□□□ -1.17
SPG11-214ENST00000558989 FBN3Q75N90 2809 aa7.73□□□□□ -1.17
SPG11-214ENST00000558989 TMEM272A0A1B0GTI8 110 aa7.72□□□□□ -1.17
SPG11-214ENST00000558989 TRDV1A0A1B0GX56 115 aa7.72□□□□□ -1.17
SPG11-214ENST00000558989 LY6LH3BQJ8 138 aa7.72□□□□□ -1.17
SPG11-214ENST00000558989 PDCD5O14737 125 aa7.72□□□□□ -1.17
SPG11-214ENST00000558989 TIMM23O14925 209 aa7.72□□□□□ -1.17
SPG11-214ENST00000558989 ANXA7P20073 488 aaKnown RBP7.72□□□□□ -1.17
SPG11-214ENST00000558989 RAB3BP20337 219 aa7.72□□□□□ -1.17
SPG11-214ENST00000558989 PPP1CCP36873 323 aaKnown RBP7.72□□□□□ -1.17
SPG11-214ENST00000558989 QRFPP83859 136 aa7.72□□□□□ -1.17
SPG11-214ENST00000558989 PAX5Q02548 391 aa7.72□□□□□ -1.17
SPG11-214ENST00000558989 MXD1Q05195 221 aa7.72□□□□□ -1.17
SPG11-214ENST00000558989 MADCAM1Q13477 382 aa7.72□□□□□ -1.17
SPG11-214ENST00000558989 TEPPQ6URK8 271 aa7.72□□□□□ -1.17
SPG11-214ENST00000558989 SGMS2Q8NHU3 365 aa7.72□□□□□ -1.17
SPG11-214ENST00000558989 MITD1Q8WV92 249 aa7.72□□□□□ -1.17
SPG11-214ENST00000558989 DAZAP1Q96EP5 407 aaKnown RBP7.72□□□□□ -1.17
SPG11-214ENST00000558989 ARHGAP5-AS1Q96IT6 56 aa7.72□□□□□ -1.17
SPG11-214ENST00000558989 URM1Q9BTM9 101 aaKnown RBP7.72□□□□□ -1.17
SPG11-214ENST00000558989 C16orf95Q9H693 158 aa7.72□□□□□ -1.17
SPG11-214ENST00000558989 ZNF702PQ9H963 129 aa7.72□□□□□ -1.17
SPG11-214ENST00000558989 OR2S2Q9NQN1 319 aa7.72□□□□□ -1.17
SPG11-214ENST00000558989 STEAP1Q9UHE8 339 aa7.72□□□□□ -1.17
SPG11-214ENST00000558989 AK3Q9UIJ7 227 aa7.72□□□□□ -1.17
SPG11-214ENST00000558989 HSD17B6O14756 317 aa7.71□□□□□ -1.17
SPG11-214ENST00000558989 ORC5O43913 435 aa7.71□□□□□ -1.17
SPG11-214ENST00000558989 EFNB2P52799 333 aa7.71□□□□□ -1.17
SPG11-214ENST00000558989 ABCA11PQ4W5N1 156 aa7.71□□□□□ -1.17
SPG11-214ENST00000558989 TEX38Q6PEX7 206 aa7.71□□□□□ -1.17
SPG11-214ENST00000558989 CREB3L1Q96BA8 519 aa7.71□□□□□ -1.17
SPG11-214ENST00000558989 CITED1Q99966 193 aa7.71□□□□□ -1.17
SPG11-214ENST00000558989 TM2D1Q9BX74 207 aa7.71□□□□□ -1.17
SPG11-214ENST00000558989 YTHDF1Q9BYJ9 559 aaKnown RBP7.71□□□□□ -1.17
SPG11-214ENST00000558989 TXNL4BQ9NX01 149 aaKnown RBP7.71□□□□□ -1.17
SPG11-214ENST00000558989 STUB1Q9UNE7 303 aa7.71□□□□□ -1.17
SPG11-214ENST00000558989 GPR132Q9UNW8 380 aa7.71□□□□□ -1.17
SPG11-214ENST00000558989 MGAM2Q2M2H8 2515 aa7.71□□□□□ -1.17
SPG11-214ENST00000558989 CTDSPLO15194 276 aa7.71□□□□□ -1.18
SPG11-214ENST00000558989 MRPS14O60783 128 aaKnown RBP7.71□□□□□ -1.18
SPG11-214ENST00000558989 FCGR3BO75015 233 aa7.71□□□□□ -1.18
SPG11-214ENST00000558989 IGKV1D-33P01593 117 aa7.71□□□□□ -1.18
SPG11-214ENST00000558989 IGKV1-33P01594 117 aa7.71□□□□□ -1.18
SPG11-214ENST00000558989 KIR2DS4P43632 304 aa7.71□□□□□ -1.18
SPG11-214ENST00000558989 MOGAT2Q3SYC2 334 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms