RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 WFDC10AQ9H1F0 79 aa13.46□□□□□ -0.25
TSPAN3-204ENST00000558394 CRTAPO75718 401 aaPredicted RBP13.45□□□□□ -0.26
TSPAN3-204ENST00000558394 MGMTP16455 207 aa13.45□□□□□ -0.26
TSPAN3-204ENST00000558394 RPL22L1Q6P5R6 122 aaKnown RBP13.45□□□□□ -0.26
TSPAN3-204ENST00000558394 OR5AN1Q8NGI8 311 aa13.45□□□□□ -0.26
TSPAN3-204ENST00000558394 COA4Q9NYJ1 87 aa13.45□□□□□ -0.26
TSPAN3-204ENST00000558394 PDCD6O75340 191 aa13.44□□□□□ -0.26
TSPAN3-204ENST00000558394 BAG2O95816 211 aa13.44□□□□□ -0.26
TSPAN3-204ENST00000558394 TRBV12-3P01733 135 aa13.44□□□□□ -0.26
TSPAN3-204ENST00000558394 MECP2P51608 486 aaKnown RBP13.44□□□□□ -0.26
TSPAN3-204ENST00000558394 DEFA5Q01523 94 aa13.44□□□□□ -0.26
TSPAN3-204ENST00000558394 CCDC58Q4VC31 144 aa13.44□□□□□ -0.26
TSPAN3-204ENST00000558394 CEMP1Q6PRD7 247 aaPredicted RBP13.44□□□□□ -0.26
TSPAN3-204ENST00000558394 SLC16A13Q7RTY0 426 aa13.44□□□□□ -0.26
TSPAN3-204ENST00000558394 ORAI1Q96D31 301 aa13.44□□□□□ -0.26
TSPAN3-204ENST00000558394 ABHD14BQ96IU4 210 aa13.44□□□□□ -0.26
TSPAN3-204ENST00000558394 TINAGL1Q9GZM7 467 aaPredicted RBP13.44□□□□□ -0.26
TSPAN3-204ENST00000558394 KMT2AQ03164 3969 aa13.43□□□□□ -0.26
TSPAN3-204ENST00000558394 SAC3D1A6NKF1 404 aa13.43□□□□□ -0.26
TSPAN3-204ENST00000558394 ZNF785A8K8V0 405 aa13.43□□□□□ -0.26
TSPAN3-204ENST00000558394 HMGN3Q15651 99 aa13.43□□□□□ -0.26
TSPAN3-204ENST00000558394 CENPNQ96H22 339 aaPredicted RBP13.43□□□□□ -0.26
TSPAN3-204ENST00000558394 Q96MT0 163 aa13.43□□□□□ -0.26
TSPAN3-204ENST00000558394 AASSQ9UDR5 926 aa13.43□□□□□ -0.26
TSPAN3-204ENST00000558394 H3BNX3 289 aa13.42□□□□□ -0.26
TSPAN3-204ENST00000558394 NDUFB8O95169 186 aa13.42□□□□□ -0.26
TSPAN3-204ENST00000558394 APOA2P02652 100 aa13.42□□□□□ -0.26
TSPAN3-204ENST00000558394 IGFBP3P17936 291 aaPredicted RBP13.42□□□□□ -0.26
TSPAN3-204ENST00000558394 PDPNQ86YL7 162 aa13.42□□□□□ -0.26
TSPAN3-204ENST00000558394 DRAXINQ8NBI3 349 aaPredicted RBP13.42□□□□□ -0.26
TSPAN3-204ENST00000558394 SETD6Q8TBK2 473 aa13.42□□□□□ -0.26
TSPAN3-204ENST00000558394 GATAD1Q8WUU5 269 aa13.42□□□□□ -0.26
TSPAN3-204ENST00000558394 SLC7A6OSQ96CW6 309 aaPredicted RBP13.42□□□□□ -0.26
TSPAN3-204ENST00000558394 NEDD4LQ96PU5 975 aa13.42□□□□□ -0.26
TSPAN3-204ENST00000558394 PHB2Q99623 299 aa13.42□□□□□ -0.26
TSPAN3-204ENST00000558394 OVOL2Q9BRP0 275 aa13.42□□□□□ -0.26
TSPAN3-204ENST00000558394 GGTLC1Q9BX51 225 aa13.42□□□□□ -0.26
TSPAN3-204ENST00000558394 CHMP1AQ9HD42 196 aaPredicted RBP13.42□□□□□ -0.26
TSPAN3-204ENST00000558394 AMBNQ9NP70 447 aa13.42□□□□□ -0.26
TSPAN3-204ENST00000558394 DEDDO75618 318 aa13.41□□□□□ -0.26
TSPAN3-204ENST00000558394 IGKV1-16P04430 117 aa13.41□□□□□ -0.26
TSPAN3-204ENST00000558394 CAPGP40121 348 aa13.41□□□□□ -0.26
TSPAN3-204ENST00000558394 DEFB114Q30KQ6 69 aa13.41□□□□□ -0.26
TSPAN3-204ENST00000558394 ZIK1Q3SY52 487 aaPredicted RBP13.41□□□□□ -0.26
TSPAN3-204ENST00000558394 SIGIRRQ6IA17 410 aa13.41□□□□□ -0.26
TSPAN3-204ENST00000558394 OR52I1Q8NGK6 324 aa13.41□□□□□ -0.26
TSPAN3-204ENST00000558394 EDARADDQ8WWZ3 215 aa13.41□□□□□ -0.26
TSPAN3-204ENST00000558394 THRSPQ92748 146 aa13.41□□□□□ -0.26
TSPAN3-204ENST00000558394 Q96M66 194 aa13.41□□□□□ -0.26
TSPAN3-204ENST00000558394 OR14A2Q96R54 314 aa13.41□□□□□ -0.26
TSPAN3-204ENST00000558394 PARP12Q9H0J9 701 aaKnown RBP13.41□□□□□ -0.26
TSPAN3-204ENST00000558394 LOC102724200A0A096LPH7 203 aaPredicted RBP13.4□□□□□ -0.26
TSPAN3-204ENST00000558394 A0A0J9YWU9 116 aa13.4□□□□□ -0.26
TSPAN3-204ENST00000558394 SNRPBP14678 240 aaKnown RBP13.4□□□□□ -0.26
TSPAN3-204ENST00000558394 XAF1Q6GPH4 301 aa13.4□□□□□ -0.26
TSPAN3-204ENST00000558394 TMPRSS11AQ6ZMR5 421 aa13.4□□□□□ -0.26
TSPAN3-204ENST00000558394 FAM46BQ96A09 425 aa13.4□□□□□ -0.26
TSPAN3-204ENST00000558394 TECRQ9NZ01 308 aaKnown RBP13.4□□□□□ -0.26
TSPAN3-204ENST00000558394 ZNF221Q9UK13 617 aa13.4□□□□□ -0.26
TSPAN3-204ENST00000558394 RPL36Q9Y3U8 105 aaKnown RBP13.4□□□□□ -0.26
TSPAN3-204ENST00000558394 ITGB1BP1O14713 200 aa13.39□□□□□ -0.27
TSPAN3-204ENST00000558394 OR13C5Q8NGS8 318 aa13.39□□□□□ -0.27
TSPAN3-204ENST00000558394 SMIM19Q96E16 107 aa13.39□□□□□ -0.27
TSPAN3-204ENST00000558394 SULT4A1Q9BR01 284 aa13.39□□□□□ -0.27
TSPAN3-204ENST00000558394 TRAV8-7A0A075B6U6 113 aa13.38□□□□□ -0.27
TSPAN3-204ENST00000558394 MPPED1O15442 326 aa13.38□□□□□ -0.27
TSPAN3-204ENST00000558394 TUSC2O75896 110 aa13.38□□□□□ -0.27
TSPAN3-204ENST00000558394 APELAP0DMC3 54 aa13.38□□□□□ -0.27
TSPAN3-204ENST00000558394 CEACAM6P40199 344 aa13.38□□□□□ -0.27
TSPAN3-204ENST00000558394 KIR2DS2P43631 304 aa13.38□□□□□ -0.27
TSPAN3-204ENST00000558394 EXOSC2Q13868 293 aaKnown RBP13.38□□□□□ -0.27
TSPAN3-204ENST00000558394 Q499Y3 187 aa13.38□□□□□ -0.27
TSPAN3-204ENST00000558394 C1orf146Q5VVC0 180 aa13.38□□□□□ -0.27
TSPAN3-204ENST00000558394 LGALS9CQ6DKI2 356 aa13.38□□□□□ -0.27
TSPAN3-204ENST00000558394 LYG2Q86SG7 212 aa13.38□□□□□ -0.27
TSPAN3-204ENST00000558394 CDH26Q8IXH8 852 aa13.38□□□□□ -0.27
TSPAN3-204ENST00000558394 WDR89Q96FK6 387 aaPredicted RBP13.38□□□□□ -0.27
TSPAN3-204ENST00000558394 CYYR1Q96J86 154 aa13.38□□□□□ -0.27
TSPAN3-204ENST00000558394 FAAP24Q9BTP7 215 aa13.38□□□□□ -0.27
TSPAN3-204ENST00000558394 BMPR1BO00238 502 aa13.37□□□□□ -0.27
TSPAN3-204ENST00000558394 ALPLP05186 524 aa13.37□□□□□ -0.27
TSPAN3-204ENST00000558394 OR9G9P0C7N8 305 aa13.37□□□□□ -0.27
TSPAN3-204ENST00000558394 LIMS3P0CW19 117 aa13.37□□□□□ -0.27
TSPAN3-204ENST00000558394 LIMS4P0CW20 117 aa13.37□□□□□ -0.27
TSPAN3-204ENST00000558394 FOLR2P14207 255 aa13.37□□□□□ -0.27
TSPAN3-204ENST00000558394 ZBTB25P24278 435 aa13.37□□□□□ -0.27
TSPAN3-204ENST00000558394 ATP5G2Q06055 141 aa13.37□□□□□ -0.27
TSPAN3-204ENST00000558394 TNFRSF9Q07011 255 aa13.37□□□□□ -0.27
TSPAN3-204ENST00000558394 PJVKQ0ZLH3 352 aa13.37□□□□□ -0.27
TSPAN3-204ENST00000558394 CBX3Q13185 183 aa13.37□□□□□ -0.27
TSPAN3-204ENST00000558394 MOB1BQ7L9L4 216 aa13.37□□□□□ -0.27
TSPAN3-204ENST00000558394 SVOPQ8N4V2 548 aa13.37□□□□□ -0.27
TSPAN3-204ENST00000558394 ZNF383Q8NA42 475 aa13.37□□□□□ -0.27
TSPAN3-204ENST00000558394 OR52B4Q8NGK2 314 aa13.37□□□□□ -0.27
TSPAN3-204ENST00000558394 C11orf54Q9H0W9 315 aaPredicted RBP13.37□□□□□ -0.27
TSPAN3-204ENST00000558394 ZC4H2Q9NQZ6 224 aa13.37□□□□□ -0.27
TSPAN3-204ENST00000558394 SLC35D1Q9NTN3 355 aa13.37□□□□□ -0.27
TSPAN3-204ENST00000558394 TRBV5-5A0A0J9YX44 114 aa13.36□□□□□ -0.27
TSPAN3-204ENST00000558394 A0A1W2PPK0 400 aa13.36□□□□□ -0.27
TSPAN3-204ENST00000558394 C2orf70A6NJV1 201 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms