RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 OR5H14A6NHG9 310 aa12.04□□□□□ -0.48
TPM1-211ENST00000558314 SOX15O60248 233 aa12.04□□□□□ -0.48
TPM1-211ENST00000558314 ZBTB25P24278 435 aa12.04□□□□□ -0.48
TPM1-211ENST00000558314 MC5RP33032 325 aa12.04□□□□□ -0.48
TPM1-211ENST00000558314 LINC00205P59089 165 aa12.04□□□□□ -0.48
TPM1-211ENST00000558314 TPPP2P59282 170 aa12.04□□□□□ -0.48
TPM1-211ENST00000558314 QRFPP83859 136 aa12.04□□□□□ -0.48
TPM1-211ENST00000558314 TMEM267Q0VDI3 215 aaPredicted RBP12.04□□□□□ -0.48
TPM1-211ENST00000558314 ACTBL2Q562R1 376 aa12.04□□□□□ -0.48
TPM1-211ENST00000558314 FAM71F2Q6NXP2 309 aa12.04□□□□□ -0.48
TPM1-211ENST00000558314 ZNF880Q6PDB4 577 aa12.04□□□□□ -0.48
TPM1-211ENST00000558314 OVCH2Q7RTZ1 564 aa12.04□□□□□ -0.48
TPM1-211ENST00000558314 LFNGQ8NES3 379 aa12.04□□□□□ -0.48
TPM1-211ENST00000558314 GRPEL2Q8TAA5 225 aa12.04□□□□□ -0.48
TPM1-211ENST00000558314 EDARADDQ8WWZ3 215 aa12.04□□□□□ -0.48
TPM1-211ENST00000558314 ARPC1AQ92747 370 aa12.04□□□□□ -0.48
TPM1-211ENST00000558314 ARHGAP5-AS1Q96IT6 56 aa12.04□□□□□ -0.48
TPM1-211ENST00000558314 GFI1Q99684 422 aa12.04□□□□□ -0.48
TPM1-211ENST00000558314 RIMS4Q9H426 269 aaPredicted RBP12.04□□□□□ -0.48
TPM1-211ENST00000558314 NKX1-2Q9UD57 310 aaPredicted RBP12.04□□□□□ -0.48
TPM1-211ENST00000558314 TPRKBQ9Y3C4 175 aa12.04□□□□□ -0.48
TPM1-211ENST00000558314 SMAD5-AS1Q9Y6J3 95 aa12.04□□□□□ -0.48
TPM1-211ENST00000558314 SLC17A2O00624 439 aa12.03□□□□□ -0.48
TPM1-211ENST00000558314 CA2P00918 260 aa12.03□□□□□ -0.48
TPM1-211ENST00000558314 LGALS1P09382 135 aaKnown RBP12.03□□□□□ -0.48
TPM1-211ENST00000558314 CALRP27797 417 aaKnown RBP12.03□□□□□ -0.48
TPM1-211ENST00000558314 CD40LGP29965 261 aa12.03□□□□□ -0.48
TPM1-211ENST00000558314 INSL3P51460 131 aa12.03□□□□□ -0.48
TPM1-211ENST00000558314 AQP4P55087 323 aa12.03□□□□□ -0.48
TPM1-211ENST00000558314 MRPS15P82914 257 aaKnown RBP12.03□□□□□ -0.48
TPM1-211ENST00000558314 RUNX1Q01196 453 aa12.03□□□□□ -0.48
TPM1-211ENST00000558314 PSG5Q15238 335 aa12.03□□□□□ -0.48
TPM1-211ENST00000558314 HES5Q5TA89 166 aa12.03□□□□□ -0.48
TPM1-211ENST00000558314 RNLSQ5VYX0 342 aa12.03□□□□□ -0.48
TPM1-211ENST00000558314 ZNF429Q86V71 674 aa12.03□□□□□ -0.48
TPM1-211ENST00000558314 PECRQ9BY49 303 aa12.03□□□□□ -0.48
TPM1-211ENST00000558314 TOLLIPQ9H0E2 274 aa12.03□□□□□ -0.48
TPM1-211ENST00000558314 C12orf4Q9NQ89 552 aa12.03□□□□□ -0.48
TPM1-211ENST00000558314 A0A075B6Q4 140 aa12.02□□□□□ -0.49
TPM1-211ENST00000558314 M0R1X1 148 aa12.02□□□□□ -0.49
TPM1-211ENST00000558314 BET1O15155 118 aa12.02□□□□□ -0.49
TPM1-211ENST00000558314 RGS10O43665 173 aa12.02□□□□□ -0.49
TPM1-211ENST00000558314 RBBP9O75884 186 aa12.02□□□□□ -0.49
TPM1-211ENST00000558314 ARL6IP5O75915 188 aa12.02□□□□□ -0.49
TPM1-211ENST00000558314 APOA2P02652 100 aa12.02□□□□□ -0.49
TPM1-211ENST00000558314 SPNP16150 400 aa12.02□□□□□ -0.49
TPM1-211ENST00000558314 MAP2K4P45985 399 aa12.02□□□□□ -0.49
TPM1-211ENST00000558314 PITPNAQ00169 270 aa12.02□□□□□ -0.49
TPM1-211ENST00000558314 SRSF7Q16629 238 aaKnown RBP eCLIP12.02□□□□□ -0.49
TPM1-211ENST00000558314 TMEM91Q6ZNR0 172 aa12.02□□□□□ -0.49
TPM1-211ENST00000558314 HAPLN4Q86UW8 402 aa12.02□□□□□ -0.49
TPM1-211ENST00000558314 OR5AN1Q8NGI8 311 aa12.02□□□□□ -0.49
TPM1-211ENST00000558314 RSRP1Q9BUV0 290 aa12.02□□□□□ -0.49
TPM1-211ENST00000558314 GHITMQ9H3K2 345 aa12.02□□□□□ -0.49
TPM1-211ENST00000558314 Q9N2K0 584 aa12.02□□□□□ -0.49
TPM1-211ENST00000558314 KMT2CQ8NEZ4 4911 aaKnown RBP12.01□□□□□ -0.49
TPM1-211ENST00000558314 DENRO43583 198 aaKnown RBP12.01□□□□□ -0.49
TPM1-211ENST00000558314 SLC25A17O43808 307 aa12.01□□□□□ -0.49
TPM1-211ENST00000558314 CNIH1O95406 144 aa12.01□□□□□ -0.49
TPM1-211ENST00000558314 TRGV3P03979 118 aa12.01□□□□□ -0.49
TPM1-211ENST00000558314 IGKV1-16P04430 117 aa12.01□□□□□ -0.49
TPM1-211ENST00000558314 TFAP2AP05549 437 aa12.01□□□□□ -0.49
TPM1-211ENST00000558314 CD3GP09693 182 aa12.01□□□□□ -0.49
TPM1-211ENST00000558314 EGR2P11161 476 aaPredicted RBP12.01□□□□□ -0.49
TPM1-211ENST00000558314 IRF3Q14653 427 aa12.01□□□□□ -0.49
TPM1-211ENST00000558314 TCTEX1D1Q8N7M0 179 aa12.01□□□□□ -0.49
TPM1-211ENST00000558314 ZNF383Q8NA42 475 aa12.01□□□□□ -0.49
TPM1-211ENST00000558314 OR5T1Q8NG75 326 aa12.01□□□□□ -0.49
TPM1-211ENST00000558314 MAFIPQ8WZ33 124 aa12.01□□□□□ -0.49
TPM1-211ENST00000558314 FAM3DQ96BQ1 224 aa12.01□□□□□ -0.49
TPM1-211ENST00000558314 OR4C12Q96R67 309 aa12.01□□□□□ -0.49
TPM1-211ENST00000558314 TSNAXQ99598 290 aaKnown RBP12.01□□□□□ -0.49
TPM1-211ENST00000558314 AGMATQ9BSE5 352 aa12.01□□□□□ -0.49
TPM1-211ENST00000558314 TPSG1Q9NRR2 321 aa12.01□□□□□ -0.49
TPM1-211ENST00000558314 RDH8Q9NYR8 311 aa12.01□□□□□ -0.49
TPM1-211ENST00000558314 MGAT4AQ9UM21 535 aa12.01□□□□□ -0.49
TPM1-211ENST00000558314 NUBP2Q9Y5Y2 271 aa12.01□□□□□ -0.49
TPM1-211ENST00000558314 TENM3Q9P273 2699 aa12.01□□□□□ -0.49
TPM1-211ENST00000558314 TRBV6-6A0A0A6YYG2 114 aa12□□□□□ -0.49
TPM1-211ENST00000558314 ANKRD34BA5PLL1 514 aa12□□□□□ -0.49
TPM1-211ENST00000558314 TRDCB7Z8K6 153 aa12□□□□□ -0.49
TPM1-211ENST00000558314 TMEM50BP56557 158 aa12□□□□□ -0.49
TPM1-211ENST00000558314 FABP5Q01469 135 aa12□□□□□ -0.49
TPM1-211ENST00000558314 PLA2G7Q13093 441 aa12□□□□□ -0.49
TPM1-211ENST00000558314 FXYD3Q14802 87 aa12□□□□□ -0.49
TPM1-211ENST00000558314 C2orf76Q3KRA6 126 aa12□□□□□ -0.49
TPM1-211ENST00000558314 C19orf54Q5BKX5 351 aa12□□□□□ -0.49
TPM1-211ENST00000558314 PYHIN1Q6K0P9 492 aa12□□□□□ -0.49
TPM1-211ENST00000558314 OR56B1Q8NGI3 324 aa12□□□□□ -0.49
TPM1-211ENST00000558314 FLYWCH2Q96CP2 140 aaKnown RBP12□□□□□ -0.49
TPM1-211ENST00000558314 SLC35D1Q9NTN3 355 aa12□□□□□ -0.49
TPM1-211ENST00000558314 HSF4Q9ULV5 492 aa12□□□□□ -0.49
TPM1-211ENST00000558314 RBM7Q9Y580 266 aaKnown RBP12□□□□□ -0.49
TPM1-211ENST00000558314 IGKV1-6A0A0C4DH72 117 aa11.99□□□□□ -0.49
TPM1-211ENST00000558314 HSPB1P04792 205 aaKnown RBP11.99□□□□□ -0.49
TPM1-211ENST00000558314 OR8U9P0C7N5 309 aa11.99□□□□□ -0.49
TPM1-211ENST00000558314 GP9P14770 177 aa11.99□□□□□ -0.49
TPM1-211ENST00000558314 DEFA5Q01523 94 aa11.99□□□□□ -0.49
TPM1-211ENST00000558314 TPBGQ13641 420 aa11.99□□□□□ -0.49
TPM1-211ENST00000558314 TRAM1Q15629 374 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms