RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 MED29Q9NX70 200 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 EHFQ9NZC4 300 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 NAGKQ9UJ70 344 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 B9D1Q9UPM9 204 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 KLHDC2Q9Y2U9 406 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 LSM5Q9Y4Y9 91 aaKnown RBP6.82□□□□□ -1.32
RTF1-205ENST00000558298 LRP12Q9Y561 859 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 DSCAMO60469 2012 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.81□□□□□ -1.32
RTF1-205ENST00000558298 LRP5LA4QPB2 252 aa6.81□□□□□ -1.32
RTF1-205ENST00000558298 PRR32B1ATL7 298 aa6.81□□□□□ -1.32
RTF1-205ENST00000558298 H0YL77 283 aa6.81□□□□□ -1.32
RTF1-205ENST00000558298 H7BYZ3 331 aa6.81□□□□□ -1.32
RTF1-205ENST00000558298 KCNAB3O43448 404 aa6.81□□□□□ -1.32
RTF1-205ENST00000558298 LYZL6O75951 148 aa6.81□□□□□ -1.32
RTF1-205ENST00000558298 SCGB1D1O95968 90 aa6.81□□□□□ -1.32
RTF1-205ENST00000558298 HRASP01112 189 aa6.81□□□□□ -1.32
RTF1-205ENST00000558298 QDPRP09417 244 aa6.81□□□□□ -1.32
RTF1-205ENST00000558298 H2BFMP0C1H6 154 aa6.81□□□□□ -1.32
RTF1-205ENST00000558298 BCL2P10415 239 aa6.81□□□□□ -1.32
RTF1-205ENST00000558298 S100GP29377 79 aa6.81□□□□□ -1.32
RTF1-205ENST00000558298 HOXC12P31275 282 aa6.81□□□□□ -1.32
RTF1-205ENST00000558298 ARR3P36575 388 aa6.81□□□□□ -1.32
RTF1-205ENST00000558298 SNU13P55769 128 aaKnown RBP6.81□□□□□ -1.32
RTF1-205ENST00000558298 BIDP55957 195 aa6.81□□□□□ -1.32
RTF1-205ENST00000558298 TPPP2P59282 170 aa6.81□□□□□ -1.32
RTF1-205ENST00000558298 ARF6P62330 175 aa6.81□□□□□ -1.32
RTF1-205ENST00000558298 AADACL3Q5VUY0 350 aa6.81□□□□□ -1.32
RTF1-205ENST00000558298 TMEM182Q6ZP80 229 aaPredicted RBP6.81□□□□□ -1.32
RTF1-205ENST00000558298 LIAT1Q6ZQX7 453 aa6.81□□□□□ -1.32
RTF1-205ENST00000558298 CMTM1Q8IZ96 169 aa6.81□□□□□ -1.32
RTF1-205ENST00000558298 KLHDC1Q8N7A1 406 aa6.81□□□□□ -1.32
RTF1-205ENST00000558298 CYB561D1Q8N8Q1 229 aa6.81□□□□□ -1.32
RTF1-205ENST00000558298 WDR31Q8NA23 367 aa6.81□□□□□ -1.32
RTF1-205ENST00000558298 OR13G1Q8NGZ3 307 aa6.81□□□□□ -1.32
RTF1-205ENST00000558298 OR4X1Q8NH49 305 aa6.81□□□□□ -1.32
RTF1-205ENST00000558298 NRGNQ92686 78 aa6.81□□□□□ -1.32
RTF1-205ENST00000558298 BCL2L2Q92843 193 aaPredicted RBP6.81□□□□□ -1.32
RTF1-205ENST00000558298 IL22RA2Q969J5 263 aa6.81□□□□□ -1.32
RTF1-205ENST00000558298 DNAJA3Q96EY1 480 aa6.81□□□□□ -1.32
RTF1-205ENST00000558298 TSPAN32Q96QS1 320 aa6.81□□□□□ -1.32
RTF1-205ENST00000558298 HIST1H2AAQ96QV6 131 aa6.81□□□□□ -1.32
RTF1-205ENST00000558298 TXNDC17Q9BRA2 123 aa6.81□□□□□ -1.32
RTF1-205ENST00000558298 ULBP2Q9BZM5 246 aa6.81□□□□□ -1.32
RTF1-205ENST00000558298 LPAR5Q9H1C0 372 aa6.81□□□□□ -1.32
RTF1-205ENST00000558298 CNTD2Q9H8S5 307 aa6.81□□□□□ -1.32
RTF1-205ENST00000558298 MSL2Q9HCI7 577 aa6.81□□□□□ -1.32
RTF1-205ENST00000558298 SDF2L1Q9HCN8 221 aa6.81□□□□□ -1.32
RTF1-205ENST00000558298 CDC42EP3Q9UKI2 254 aa6.81□□□□□ -1.32
RTF1-205ENST00000558298 MRPS28Q9Y2Q9 187 aaKnown RBP6.81□□□□□ -1.32
RTF1-205ENST00000558298 VPS13CQ709C8 3753 aa6.81□□□□□ -1.32
RTF1-205ENST00000558298 TEP1Q99973 2627 aaKnown RBP6.8□□□□□ -1.32
RTF1-205ENST00000558298 C11orf98E9PRG8 122 aa6.8□□□□□ -1.32
RTF1-205ENST00000558298 EREGO14944 169 aa6.8□□□□□ -1.32
RTF1-205ENST00000558298 DHHO43323 396 aa6.8□□□□□ -1.32
RTF1-205ENST00000558298 SRSF10O75494 262 aaKnown RBP6.8□□□□□ -1.32
RTF1-205ENST00000558298 RAD51DO75771 328 aa6.8□□□□□ -1.32
RTF1-205ENST00000558298 PPBPP02775 128 aa6.8□□□□□ -1.32
RTF1-205ENST00000558298 SLC25A6P12236 298 aa6.8□□□□□ -1.32
RTF1-205ENST00000558298 GNB3P16520 340 aa6.8□□□□□ -1.32
RTF1-205ENST00000558298 MSR1P21757 451 aa6.8□□□□□ -1.32
RTF1-205ENST00000558298 GNG10P50151 68 aa6.8□□□□□ -1.32
RTF1-205ENST00000558298 CNN1P51911 297 aaKnown RBP6.8□□□□□ -1.32
RTF1-205ENST00000558298 FOXG1P55316 489 aaPredicted RBP6.8□□□□□ -1.32
RTF1-205ENST00000558298 BPIFB3P59826 476 aa6.8□□□□□ -1.32
RTF1-205ENST00000558298 SELENOTP62341 195 aa6.8□□□□□ -1.32
RTF1-205ENST00000558298 MRPS34P82930 218 aaKnown RBP6.8□□□□□ -1.32
RTF1-205ENST00000558298 EWSR1Q01844 656 aaKnown RBP eCLIP6.8□□□□□ -1.32
RTF1-205ENST00000558298 UNC119Q13432 240 aa6.8□□□□□ -1.32
RTF1-205ENST00000558298 CEACAM16Q2WEN9 425 aa6.8□□□□□ -1.32
RTF1-205ENST00000558298 ACTL10Q5JWF8 245 aa6.8□□□□□ -1.32
RTF1-205ENST00000558298 PHYHD1Q5SRE7 291 aa6.8□□□□□ -1.32
RTF1-205ENST00000558298 NCR3LG1Q68D85 454 aa6.8□□□□□ -1.32
RTF1-205ENST00000558298 TMEM108Q6UXF1 575 aa6.8□□□□□ -1.32
RTF1-205ENST00000558298 ZNF66Q6ZN08 573 aa6.8□□□□□ -1.32
RTF1-205ENST00000558298 LSRQ86X29 649 aaPredicted RBP6.8□□□□□ -1.32
RTF1-205ENST00000558298 WDFY1Q8IWB7 410 aa6.8□□□□□ -1.32
RTF1-205ENST00000558298 GBGT1Q8N5D6 347 aa6.8□□□□□ -1.32
RTF1-205ENST00000558298 GVQW1Q8N7I0 195 aa6.8□□□□□ -1.32
RTF1-205ENST00000558298 OR4D6Q8NGJ1 314 aa6.8□□□□□ -1.32
RTF1-205ENST00000558298 OR10AC1Q8NH08 325 aa6.8□□□□□ -1.32
RTF1-205ENST00000558298 RNF133Q8WVZ7 376 aa6.8□□□□□ -1.32
RTF1-205ENST00000558298 MBD3L1Q8WWY6 194 aa6.8□□□□□ -1.32
RTF1-205ENST00000558298 NANOS1Q8WY41 292 aaKnown RBP6.8□□□□□ -1.32
RTF1-205ENST00000558298 FOXB1Q99853 325 aa6.8□□□□□ -1.32
RTF1-205ENST00000558298 ABHD6Q9BV23 337 aa6.8□□□□□ -1.32
RTF1-205ENST00000558298 TM2D1Q9BX74 207 aa6.8□□□□□ -1.32
RTF1-205ENST00000558298 OR51I2Q9H344 312 aa6.8□□□□□ -1.32
RTF1-205ENST00000558298 LIME1Q9H400 295 aa6.8□□□□□ -1.32
RTF1-205ENST00000558298 ELL3Q9HB65 397 aaPredicted RBP6.8□□□□□ -1.32
RTF1-205ENST00000558298 MANBALQ9NQG1 85 aa6.8□□□□□ -1.32
RTF1-205ENST00000558298 TMEM38BQ9NVV0 291 aa6.8□□□□□ -1.32
RTF1-205ENST00000558298 CGGBP1Q9UFW8 167 aaPredicted RBP6.8□□□□□ -1.32
RTF1-205ENST00000558298 HSF4Q9ULV5 492 aa6.8□□□□□ -1.32
RTF1-205ENST00000558298 SLC22A13Q9Y226 551 aa6.8□□□□□ -1.32
RTF1-205ENST00000558298 RHBDD3Q9Y3P4 386 aa6.8□□□□□ -1.32
RTF1-205ENST00000558298 RNF115Q9Y4L5 304 aa6.8□□□□□ -1.32
RTF1-205ENST00000558298 ARID1AO14497 2285 aa6.8□□□□□ -1.32
RTF1-205ENST00000558298 IGLV1-36A0A0B4J1U3 117 aa6.79□□□□□ -1.32
RTF1-205ENST00000558298 ZNF878C9JN71 531 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms