RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 RBM11P57052 281 aaKnown RBP7.07□□□□□ -1.28
USP3-208ENST00000558285 AP3S2P59780 193 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 DEFA6Q01524 100 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 PAX5Q02548 391 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 SLC22A6Q4U2R8 563 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 TMUB2Q71RG4 321 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 FGFRL1Q8N441 504 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 TOMM5Q8N4H5 51 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 OR4S1Q8NGB4 309 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 PCNPQ8WW12 178 aaKnown RBP7.07□□□□□ -1.28
USP3-208ENST00000558285 TCTEX1D2Q8WW35 142 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 DERL3Q96Q80 235 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 TSNAXQ99598 290 aaKnown RBP7.07□□□□□ -1.28
USP3-208ENST00000558285 SSX3Q99909 188 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 CHIAQ9BZP6 476 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 MEGF9Q9H1U4 602 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 TRBV5-7A0A0A0MS05 114 aa7.06□□□□□ -1.28
USP3-208ENST00000558285 IGKV1-12A0A0C4DH73 117 aa7.06□□□□□ -1.28
USP3-208ENST00000558285 MDFIC2A0A1B0GVS7 189 aa7.06□□□□□ -1.28
USP3-208ENST00000558285 F8VVB4 439 aa7.06□□□□□ -1.28
USP3-208ENST00000558285 F8VWA3 439 aa7.06□□□□□ -1.28
USP3-208ENST00000558285 SPINT2O43291 252 aa7.06□□□□□ -1.28
USP3-208ENST00000558285 PSPNO60542 156 aa7.06□□□□□ -1.28
USP3-208ENST00000558285 NDUFS6O75380 124 aaKnown RBP7.06□□□□□ -1.28
USP3-208ENST00000558285 IGKV1D-12P01611 117 aa7.06□□□□□ -1.28
USP3-208ENST00000558285 IGHV4-59P01825 116 aa7.06□□□□□ -1.28
USP3-208ENST00000558285 TFF1P04155 84 aa7.06□□□□□ -1.28
USP3-208ENST00000558285 MAS1P04201 325 aa7.06□□□□□ -1.28
USP3-208ENST00000558285 IGFBP3P17936 291 aaPredicted RBP7.06□□□□□ -1.28
USP3-208ENST00000558285 GLP1RP43220 463 aa7.06□□□□□ -1.28
USP3-208ENST00000558285 DYNLT3P51808 116 aa7.06□□□□□ -1.28
USP3-208ENST00000558285 AESQ08117 197 aa7.06□□□□□ -1.28
USP3-208ENST00000558285 KLRD1Q13241 179 aa7.06□□□□□ -1.28
USP3-208ENST00000558285 ACSM3Q53FZ2 586 aa7.06□□□□□ -1.28
USP3-208ENST00000558285 OLFML2AQ68BL7 652 aa7.06□□□□□ -1.28
USP3-208ENST00000558285 ZNF626Q68DY1 528 aa7.06□□□□□ -1.28
USP3-208ENST00000558285 ASPHD2Q6ICH7 369 aa7.06□□□□□ -1.28
USP3-208ENST00000558285 TPRA1Q86W33 373 aa7.06□□□□□ -1.28
USP3-208ENST00000558285 ZFP41Q8N8Y5 198 aa7.06□□□□□ -1.28
USP3-208ENST00000558285 Q8NFD4 153 aa7.06□□□□□ -1.28
USP3-208ENST00000558285 OR2T6Q8NHC8 308 aa7.06□□□□□ -1.28
USP3-208ENST00000558285 RGP1Q92546 391 aaPredicted RBP7.06□□□□□ -1.28
USP3-208ENST00000558285 PGLYRP3Q96LB9 341 aa7.06□□□□□ -1.28
USP3-208ENST00000558285 URM1Q9BTM9 101 aaKnown RBP7.06□□□□□ -1.28
USP3-208ENST00000558285 TMED9Q9BVK6 235 aa7.06□□□□□ -1.28
USP3-208ENST00000558285 KCNIP1Q9NZI2 227 aa7.06□□□□□ -1.28
USP3-208ENST00000558285 DPM3Q9P2X0 92 aa7.06□□□□□ -1.28
USP3-208ENST00000558285 ARHGAP32A7KAX9 2087 aa7.05□□□□□ -1.28
USP3-208ENST00000558285 IGHV2-26A0A0B4J1V2 119 aa7.05□□□□□ -1.28
USP3-208ENST00000558285 KBTBD11-OT1A0A1B0GTJ5 212 aa7.05□□□□□ -1.28
USP3-208ENST00000558285 TMEM218A2RU14 115 aa7.05□□□□□ -1.28
USP3-208ENST00000558285 C1orf196B1AJZ1 125 aa7.05□□□□□ -1.28
USP3-208ENST00000558285 H3BUX3 64 aa7.05□□□□□ -1.28
USP3-208ENST00000558285 FCN3O75636 299 aa7.05□□□□□ -1.28
USP3-208ENST00000558285 CRTAPO75718 401 aaPredicted RBP7.05□□□□□ -1.28
USP3-208ENST00000558285 SPP1P10451 314 aa7.05□□□□□ -1.28
USP3-208ENST00000558285 MGMTP16455 207 aa7.05□□□□□ -1.28
USP3-208ENST00000558285 ELK1P19419 428 aa7.05□□□□□ -1.28
USP3-208ENST00000558285 CDK2P24941 298 aa7.05□□□□□ -1.28
USP3-208ENST00000558285 OR3A4PP47883 348 aa7.05□□□□□ -1.28
USP3-208ENST00000558285 TAS2R60P59551 318 aa7.05□□□□□ -1.28
USP3-208ENST00000558285 SMCO1Q147U7 214 aa7.05□□□□□ -1.28
USP3-208ENST00000558285 ATXN7L3Q14CW9 347 aaPredicted RBP7.05□□□□□ -1.28
USP3-208ENST00000558285 SAMD5Q5TGI4 173 aa7.05□□□□□ -1.28
USP3-208ENST00000558285 SLC35E4Q6ICL7 350 aa7.05□□□□□ -1.28
USP3-208ENST00000558285 GLIPR1L1Q6UWM5 242 aa7.05□□□□□ -1.28
USP3-208ENST00000558285 TMEM91Q6ZNR0 172 aa7.05□□□□□ -1.28
USP3-208ENST00000558285 C16orf82Q7Z2V1 217 aa7.05□□□□□ -1.28
USP3-208ENST00000558285 CEACAM19Q7Z692 300 aa7.05□□□□□ -1.28
USP3-208ENST00000558285 ABHD12Q8N2K0 398 aa7.05□□□□□ -1.28
USP3-208ENST00000558285 ZNF485Q8NCK3 441 aa7.05□□□□□ -1.28
USP3-208ENST00000558285 OR9G1Q8NH87 305 aa7.05□□□□□ -1.28
USP3-208ENST00000558285 KCNG3Q8TAE7 436 aa7.05□□□□□ -1.28
USP3-208ENST00000558285 C20orf85Q9H1P6 137 aa7.05□□□□□ -1.28
USP3-208ENST00000558285 TMPRSS5Q9H3S3 457 aa7.05□□□□□ -1.28
USP3-208ENST00000558285 MXRA5Q9NR99 2828 aa7.05□□□□□ -1.28
USP3-208ENST00000558285 A0A0D9SG52 128 aa7.04□□□□□ -1.28
USP3-208ENST00000558285 M0QZ24 198 aa7.04□□□□□ -1.28
USP3-208ENST00000558285 M0QZK8 103 aa7.04□□□□□ -1.28
USP3-208ENST00000558285 SLC31A2O15432 143 aa7.04□□□□□ -1.28
USP3-208ENST00000558285 CREBL2O60519 120 aaPredicted RBP7.04□□□□□ -1.28
USP3-208ENST00000558285 CALCBP10092 127 aa7.04□□□□□ -1.28
USP3-208ENST00000558285 CD34P28906 385 aa7.04□□□□□ -1.28
USP3-208ENST00000558285 DLX6P56179 175 aa7.04□□□□□ -1.28
USP3-208ENST00000558285 RPS25P62851 125 aaKnown RBP7.04□□□□□ -1.28
USP3-208ENST00000558285 SSX2Q16385 188 aa7.04□□□□□ -1.28
USP3-208ENST00000558285 ZNF660Q6AZW8 331 aaPredicted RBP7.04□□□□□ -1.28
USP3-208ENST00000558285 Q6P435 159 aa7.04□□□□□ -1.28
USP3-208ENST00000558285 C15orf54Q8N8G6 183 aa7.04□□□□□ -1.28
USP3-208ENST00000558285 SUMF2Q8NBJ7 301 aa7.04□□□□□ -1.28
USP3-208ENST00000558285 BPIFCQ8NFQ6 507 aa7.04□□□□□ -1.28
USP3-208ENST00000558285 PIPOXQ9P0Z9 390 aa7.04□□□□□ -1.28
USP3-208ENST00000558285 IL36RNQ9UBH0 155 aa7.04□□□□□ -1.28
USP3-208ENST00000558285 MGAT4CQ9UBM8 478 aa7.04□□□□□ -1.28
USP3-208ENST00000558285 TRAPPC2LQ9UL33 140 aa7.04□□□□□ -1.28
USP3-208ENST00000558285 RNF114Q9Y508 228 aa7.04□□□□□ -1.28
USP3-208ENST00000558285 STAB1Q9NY15 2570 aa7.04□□□□□ -1.28
USP3-208ENST00000558285 ODF3BA8MYP8 253 aa7.04□□□□□ -1.28
USP3-208ENST00000558285 HSPB6O14558 160 aa7.04□□□□□ -1.28
USP3-208ENST00000558285 FAM106CPP0CH98 169 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms