RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 OR2V2Q96R30 315 aa4.04□□□□□ -1.76
RTF1-204ENST00000558117 SERPINI1Q99574 410 aa4.04□□□□□ -1.76
RTF1-204ENST00000558117 DPY30Q9C005 99 aa4.04□□□□□ -1.76
RTF1-204ENST00000558117 PPDPFQ9H3Y8 114 aa4.04□□□□□ -1.76
RTF1-204ENST00000558117 REEP4Q9H6H4 257 aa4.04□□□□□ -1.76
RTF1-204ENST00000558117 FGF20Q9NP95 211 aaPredicted RBP4.04□□□□□ -1.76
RTF1-204ENST00000558117 VNN3Q9NY84 501 aa4.04□□□□□ -1.76
RTF1-204ENST00000558117 EHFQ9NZC4 300 aa4.04□□□□□ -1.76
RTF1-204ENST00000558117 C12orf77C9JDV5 145 aa4.03□□□□□ -1.76
RTF1-204ENST00000558117 H3BSH0 61 aa4.03□□□□□ -1.76
RTF1-204ENST00000558117 SCN2BO60939 215 aa4.03□□□□□ -1.76
RTF1-204ENST00000558117 ATP5HO75947 161 aa4.03□□□□□ -1.76
RTF1-204ENST00000558117 GLAP06280 429 aa4.03□□□□□ -1.76
RTF1-204ENST00000558117 FCGR3AP08637 254 aa4.03□□□□□ -1.76
RTF1-204ENST00000558117 IL3P08700 152 aa4.03□□□□□ -1.76
RTF1-204ENST00000558117 LAMP1P11279 417 aa4.03□□□□□ -1.76
RTF1-204ENST00000558117 SERPINA2P20848 420 aa4.03□□□□□ -1.76
RTF1-204ENST00000558117 S100A3P33764 101 aa4.03□□□□□ -1.76
RTF1-204ENST00000558117 MPIP34949 423 aa4.03□□□□□ -1.76
RTF1-204ENST00000558117 PSME3P61289 254 aa4.03□□□□□ -1.76
RTF1-204ENST00000558117 SKP2Q13309 424 aa4.03□□□□□ -1.76
RTF1-204ENST00000558117 CYP51A1Q16850 503 aa4.03□□□□□ -1.76
RTF1-204ENST00000558117 ZNF181Q2M3W8 571 aa4.03□□□□□ -1.76
RTF1-204ENST00000558117 TIMM50Q3ZCQ8 353 aa4.03□□□□□ -1.76
RTF1-204ENST00000558117 RSBN1Q5VWQ0 802 aaPredicted RBP4.03□□□□□ -1.76
RTF1-204ENST00000558117 LINC00322Q6ZN03 302 aaPredicted RBP4.03□□□□□ -1.76
RTF1-204ENST00000558117 ZNF600Q6ZNG1 722 aa4.03□□□□□ -1.76
RTF1-204ENST00000558117 PAGE2Q7Z2X7 111 aa4.03□□□□□ -1.76
RTF1-204ENST00000558117 CLECL1Q8IZS7 167 aa4.03□□□□□ -1.76
RTF1-204ENST00000558117 C19orf18Q8NEA5 215 aa4.03□□□□□ -1.76
RTF1-204ENST00000558117 OR10H4Q8NGA5 316 aa4.03□□□□□ -1.76
RTF1-204ENST00000558117 TMEM234Q8WY98 164 aa4.03□□□□□ -1.76
RTF1-204ENST00000558117 CCDC124Q96CT7 223 aaKnown RBP4.03□□□□□ -1.76
RTF1-204ENST00000558117 OR52E6Q96RD3 313 aa4.03□□□□□ -1.76
RTF1-204ENST00000558117 ECSITQ9BQ95 431 aa4.03□□□□□ -1.76
RTF1-204ENST00000558117 FAIM2Q9BWQ8 316 aa4.03□□□□□ -1.76
RTF1-204ENST00000558117 OR2J1Q9GZK6 312 aa4.03□□□□□ -1.76
RTF1-204ENST00000558117 HDHD2Q9H0R4 259 aa4.03□□□□□ -1.76
RTF1-204ENST00000558117 EFCAB1Q9HAE3 211 aa4.03□□□□□ -1.76
RTF1-204ENST00000558117 KCNIP3Q9Y2W7 256 aa4.03□□□□□ -1.76
RTF1-204ENST00000558117 NDUFAF1Q9Y375 327 aa4.03□□□□□ -1.76
RTF1-204ENST00000558117 OR5B21A6NL26 309 aa4.02□□□□□ -1.77
RTF1-204ENST00000558117 H3BNH8 94 aa4.02□□□□□ -1.77
RTF1-204ENST00000558117 RFXANKO14593 260 aa4.02□□□□□ -1.77
RTF1-204ENST00000558117 VAMP5O95183 116 aa4.02□□□□□ -1.77
RTF1-204ENST00000558117 FARS2O95363 451 aaKnown RBP4.02□□□□□ -1.77
RTF1-204ENST00000558117 CTRB1P17538 263 aa4.02□□□□□ -1.77
RTF1-204ENST00000558117 PMCHP20382 165 aa4.02□□□□□ -1.77
RTF1-204ENST00000558117 CDKN2CP42773 168 aa4.02□□□□□ -1.77
RTF1-204ENST00000558117 YAP1P46937 504 aaKnown RBP4.02□□□□□ -1.77
RTF1-204ENST00000558117 MNAT1P51948 309 aa4.02□□□□□ -1.77
RTF1-204ENST00000558117 HNRNPA3P51991 378 aaKnown RBP4.02□□□□□ -1.77
RTF1-204ENST00000558117 ELF3P78545 371 aaPredicted RBP4.02□□□□□ -1.77
RTF1-204ENST00000558117 ZNF45Q02386 682 aa4.02□□□□□ -1.77
RTF1-204ENST00000558117 OR5I1Q13606 314 aa4.02□□□□□ -1.77
RTF1-204ENST00000558117 KIR2DS1Q14954 304 aa4.02□□□□□ -1.77
RTF1-204ENST00000558117 OXA1LQ15070 435 aa4.02□□□□□ -1.77
RTF1-204ENST00000558117 MAPRE2Q15555 327 aa4.02□□□□□ -1.77
RTF1-204ENST00000558117 CTRB2Q6GPI1 263 aa4.02□□□□□ -1.77
RTF1-204ENST00000558117 FAM71E1Q6IPT2 247 aa4.02□□□□□ -1.77
RTF1-204ENST00000558117 SKA3Q8IX90 412 aa4.02□□□□□ -1.77
RTF1-204ENST00000558117 MSRB3Q8IXL7 192 aa4.02□□□□□ -1.77
RTF1-204ENST00000558117 RIMKLAQ8IXN7 391 aa4.02□□□□□ -1.77
RTF1-204ENST00000558117 C10orf67Q8IYJ2 551 aa4.02□□□□□ -1.77
RTF1-204ENST00000558117 DYNAPQ8N1N2 210 aa4.02□□□□□ -1.77
RTF1-204ENST00000558117 ZNF565Q8N9K5 539 aa4.02□□□□□ -1.77
RTF1-204ENST00000558117 OR4D6Q8NGJ1 314 aa4.02□□□□□ -1.77
RTF1-204ENST00000558117 OR1S2Q8NGQ3 325 aa4.02□□□□□ -1.77
RTF1-204ENST00000558117 OR8U1Q8NH10 309 aa4.02□□□□□ -1.77
RTF1-204ENST00000558117 CAPSLQ8WWF8 208 aa4.02□□□□□ -1.77
RTF1-204ENST00000558117 TRUB1Q8WWH5 349 aaKnown RBP4.02□□□□□ -1.77
RTF1-204ENST00000558117 MAP1LC3CQ9BXW4 147 aa4.02□□□□□ -1.77
RTF1-204ENST00000558117 ACTR3CQ9C0K3 210 aaPredicted RBP4.02□□□□□ -1.77
RTF1-204ENST00000558117 ISYNA1Q9NPH2 558 aa4.02□□□□□ -1.77
RTF1-204ENST00000558117 CMTM6Q9NX76 183 aa4.02□□□□□ -1.77
RTF1-204ENST00000558117 GIN1Q9NXP7 522 aa4.02□□□□□ -1.77
RTF1-204ENST00000558117 MLXQ9UH92 298 aa4.02□□□□□ -1.77
RTF1-204ENST00000558117 TNXBP22105 4242 aa4.01□□□□□ -1.77
RTF1-204ENST00000558117 TMEM72A0PK05 275 aa4.01□□□□□ -1.77
RTF1-204ENST00000558117 PSMB11A5LHX3 300 aa4.01□□□□□ -1.77
RTF1-204ENST00000558117 GOSR2O14653 212 aa4.01□□□□□ -1.77
RTF1-204ENST00000558117 ENTPD5O75356 428 aa4.01□□□□□ -1.77
RTF1-204ENST00000558117 C6orf47O95873 294 aa4.01□□□□□ -1.77
RTF1-204ENST00000558117 IL6P05231 212 aa4.01□□□□□ -1.77
RTF1-204ENST00000558117 DUX4L4P0CJ87 422 aa4.01□□□□□ -1.77
RTF1-204ENST00000558117 HSD17B1P14061 328 aa4.01□□□□□ -1.77
RTF1-204ENST00000558117 PRPS1L1P21108 318 aa4.01□□□□□ -1.77
RTF1-204ENST00000558117 LEPP41159 167 aa4.01□□□□□ -1.77
RTF1-204ENST00000558117 ASIPP42127 132 aa4.01□□□□□ -1.77
RTF1-204ENST00000558117 NCBP2P52298 156 aaKnown RBP eCLIP4.01□□□□□ -1.77
RTF1-204ENST00000558117 CRISP1P54107 249 aa4.01□□□□□ -1.77
RTF1-204ENST00000558117 MTPNP58546 118 aa4.01□□□□□ -1.77
RTF1-204ENST00000558117 KRTAP12-2P59991 146 aa4.01□□□□□ -1.77
RTF1-204ENST00000558117 UBE2MP61081 183 aaKnown RBP4.01□□□□□ -1.77
RTF1-204ENST00000558117 PSG7Q13046 419 aa4.01□□□□□ -1.77
RTF1-204ENST00000558117 TBC1D28Q2M2D7 210 aa4.01□□□□□ -1.77
RTF1-204ENST00000558117 DNAL1Q4LDG9 190 aa4.01□□□□□ -1.77
RTF1-204ENST00000558117 SPIN4Q56A73 249 aa4.01□□□□□ -1.77
RTF1-204ENST00000558117 ZNF57Q68EA5 555 aaPredicted RBP4.01□□□□□ -1.77
RTF1-204ENST00000558117 NANOGP8Q6NSW7 305 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms