RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 PTHLHP12272 177 aa6.02□□□□□ -1.45
SPG11-205ENST00000558080 SERPINA2P20848 420 aa6.02□□□□□ -1.45
SPG11-205ENST00000558080 HLA-DMAP28067 261 aa6.02□□□□□ -1.45
SPG11-205ENST00000558080 RCVRNP35243 200 aa6.02□□□□□ -1.45
SPG11-205ENST00000558080 CEACAM3P40198 252 aa6.02□□□□□ -1.45
SPG11-205ENST00000558080 VEGFCP49767 419 aa6.02□□□□□ -1.45
SPG11-205ENST00000558080 ARHGDIBP52566 201 aa6.02□□□□□ -1.45
SPG11-205ENST00000558080 SLURP1P55000 103 aa6.02□□□□□ -1.45
SPG11-205ENST00000558080 TAS2R19P59542 299 aa6.02□□□□□ -1.45
SPG11-205ENST00000558080 RPS27AP62979 156 aaKnown RBP6.02□□□□□ -1.45
SPG11-205ENST00000558080 IL13RA2Q14627 380 aa6.02□□□□□ -1.45
SPG11-205ENST00000558080 PNLIPRP3Q17RR3 467 aa6.02□□□□□ -1.45
SPG11-205ENST00000558080 HLA-DRB5Q30154 266 aa6.02□□□□□ -1.45
SPG11-205ENST00000558080 ZNF260Q3ZCT1 412 aa6.02□□□□□ -1.45
SPG11-205ENST00000558080 SLC22A6Q4U2R8 563 aa6.02□□□□□ -1.45
SPG11-205ENST00000558080 ABCA11PQ4W5N1 156 aa6.02□□□□□ -1.45
SPG11-205ENST00000558080 C9orf152Q5JTZ5 239 aa6.02□□□□□ -1.45
SPG11-205ENST00000558080 AKAP14Q86UN6 197 aa6.02□□□□□ -1.45
SPG11-205ENST00000558080 OSR2Q8N2R0 312 aa6.02□□□□□ -1.45
SPG11-205ENST00000558080 ZNF565Q8N9K5 539 aa6.02□□□□□ -1.45
SPG11-205ENST00000558080 TMEM229BQ8NBD8 167 aa6.02□□□□□ -1.45
SPG11-205ENST00000558080 SUMF2Q8NBJ7 301 aa6.02□□□□□ -1.45
SPG11-205ENST00000558080 OR5AU1Q8NGC0 362 aa6.02□□□□□ -1.45
SPG11-205ENST00000558080 OR9G1Q8NH87 305 aa6.02□□□□□ -1.45
SPG11-205ENST00000558080 R3HDM4Q96D70 268 aa6.02□□□□□ -1.45
SPG11-205ENST00000558080 RAB3CQ96E17 227 aa6.02□□□□□ -1.45
SPG11-205ENST00000558080 CITED2Q99967 270 aaPredicted RBP6.02□□□□□ -1.45
SPG11-205ENST00000558080 NEURL2Q9BR09 285 aa6.02□□□□□ -1.45
SPG11-205ENST00000558080 SLC25A33Q9BSK2 321 aa6.02□□□□□ -1.45
SPG11-205ENST00000558080 DPCDQ9BVM2 203 aaPredicted RBP6.02□□□□□ -1.45
SPG11-205ENST00000558080 TM2D1Q9BX74 207 aa6.02□□□□□ -1.45
SPG11-205ENST00000558080 IDI2-AS1Q9NZ38 188 aa6.02□□□□□ -1.45
SPG11-205ENST00000558080 IL36GQ9NZH8 169 aa6.02□□□□□ -1.45
SPG11-205ENST00000558080 KLK11Q9UBX7 282 aa6.02□□□□□ -1.45
SPG11-205ENST00000558080 ST3GAL6Q9Y274 331 aa6.02□□□□□ -1.45
SPG11-205ENST00000558080 A0A087X0M5 115 aa6.01□□□□□ -1.45
SPG11-205ENST00000558080 A0A1B0GX30 115 aa6.01□□□□□ -1.45
SPG11-205ENST00000558080 A0A1W2PP11 408 aa6.01□□□□□ -1.45
SPG11-205ENST00000558080 A0A1W2PPE3 182 aa6.01□□□□□ -1.45
SPG11-205ENST00000558080 TMEM235A6NFC5 223 aa6.01□□□□□ -1.45
SPG11-205ENST00000558080 HMX3A6NHT5 357 aa6.01□□□□□ -1.45
SPG11-205ENST00000558080 J3QR06 171 aa6.01□□□□□ -1.45
SPG11-205ENST00000558080 GEMIN2O14893 280 aaKnown RBP6.01□□□□□ -1.45
SPG11-205ENST00000558080 CA11O75493 328 aa6.01□□□□□ -1.45
SPG11-205ENST00000558080 OR7C1O76099 320 aaPredicted RBP6.01□□□□□ -1.45
SPG11-205ENST00000558080 PRB2P02812 416 aaPredicted RBP6.01□□□□□ -1.45
SPG11-205ENST00000558080 OPN1MWP04001 364 aa6.01□□□□□ -1.45
SPG11-205ENST00000558080 TCRBP04435 133 aa6.01□□□□□ -1.45
SPG11-205ENST00000558080 AKAIN1P0CW23 69 aa6.01□□□□□ -1.45
SPG11-205ENST00000558080 OPN1MW2P0DN77 364 aa6.01□□□□□ -1.45
SPG11-205ENST00000558080 OPN1MW3P0DN78 364 aa6.01□□□□□ -1.45
SPG11-205ENST00000558080 GTF2F2P13984 249 aa6.01□□□□□ -1.45
SPG11-205ENST00000558080 HIST1H1DP16402 221 aaKnown RBP6.01□□□□□ -1.45
SPG11-205ENST00000558080 MGMTP16455 207 aa6.01□□□□□ -1.45
SPG11-205ENST00000558080 TBPP20226 339 aa6.01□□□□□ -1.45
SPG11-205ENST00000558080 CBX5P45973 191 aa6.01□□□□□ -1.45
SPG11-205ENST00000558080 GNG10P50151 68 aa6.01□□□□□ -1.45
SPG11-205ENST00000558080 RBM11P57052 281 aaKnown RBP6.01□□□□□ -1.45
SPG11-205ENST00000558080 GNG2P59768 71 aa6.01□□□□□ -1.45
SPG11-205ENST00000558080 DIAPH2-AS1Q14236 149 aa6.01□□□□□ -1.45
SPG11-205ENST00000558080 TATDN3Q17R31 274 aa6.01□□□□□ -1.45
SPG11-205ENST00000558080 MOGAT2Q3SYC2 334 aa6.01□□□□□ -1.45
SPG11-205ENST00000558080 CDNFQ49AH0 187 aa6.01□□□□□ -1.45
SPG11-205ENST00000558080 ATAD3CQ5T2N8 411 aa6.01□□□□□ -1.45
SPG11-205ENST00000558080 C16orf82Q7Z2V1 217 aa6.01□□□□□ -1.45
SPG11-205ENST00000558080 CENPVQ7Z7K6 275 aaPredicted RBP6.01□□□□□ -1.45
SPG11-205ENST00000558080 NDUFA11Q86Y39 141 aa6.01□□□□□ -1.45
SPG11-205ENST00000558080 FAM89BQ8N5H3 189 aa6.01□□□□□ -1.45
SPG11-205ENST00000558080 TMEM104Q8NE00 496 aa6.01□□□□□ -1.45
SPG11-205ENST00000558080 Q8NFD4 153 aa6.01□□□□□ -1.45
SPG11-205ENST00000558080 OR56B4Q8NH76 319 aa6.01□□□□□ -1.45
SPG11-205ENST00000558080 UBALD1Q8TB05 177 aa6.01□□□□□ -1.45
SPG11-205ENST00000558080 NEK7Q8TDX7 302 aa6.01□□□□□ -1.45
SPG11-205ENST00000558080 WIPF2Q8TF74 440 aaPredicted RBP6.01□□□□□ -1.45
SPG11-205ENST00000558080 CCDC107Q8WV48 283 aa6.01□□□□□ -1.45
SPG11-205ENST00000558080 TOMM40LQ969M1 308 aa6.01□□□□□ -1.45
SPG11-205ENST00000558080 RPEQ96AT9 228 aa6.01□□□□□ -1.45
SPG11-205ENST00000558080 MRPS24Q96EL2 167 aaKnown RBP6.01□□□□□ -1.45
SPG11-205ENST00000558080 EAF1Q96JC9 268 aaPredicted RBP6.01□□□□□ -1.45
SPG11-205ENST00000558080 AKR1E2Q96JD6 320 aa6.01□□□□□ -1.45
SPG11-205ENST00000558080 RBM14Q96PK6 669 aaKnown RBP6.01□□□□□ -1.45
SPG11-205ENST00000558080 SELENOIQ9C0D9 397 aa6.01□□□□□ -1.45
SPG11-205ENST00000558080 NCOR1P1Q9H4R4 102 aa6.01□□□□□ -1.45
SPG11-205ENST00000558080 BANF2Q9H503 90 aa6.01□□□□□ -1.45
SPG11-205ENST00000558080 IFT46Q9NQC8 304 aa6.01□□□□□ -1.45
SPG11-205ENST00000558080 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.01□□□□□ -1.45
SPG11-205ENST00000558080 MCUBQ9NWR8 336 aa6.01□□□□□ -1.45
SPG11-205ENST00000558080 ETAA1Q9NY74 926 aa6.01□□□□□ -1.45
SPG11-205ENST00000558080 PSG11Q9UQ72 335 aa6.01□□□□□ -1.45
SPG11-205ENST00000558080 ALG5Q9Y673 324 aa6.01□□□□□ -1.45
SPG11-205ENST00000558080 A0A0A6YYD4 124 aa6□□□□□ -1.45
SPG11-205ENST00000558080 SERPINE3A8MV23 424 aa6□□□□□ -1.45
SPG11-205ENST00000558080 OOSP1A8MZH6 123 aa6□□□□□ -1.45
SPG11-205ENST00000558080 ZNF736B4DX44 427 aaPredicted RBP6□□□□□ -1.45
SPG11-205ENST00000558080 NPIPB11E5RHQ5 1161 aa6□□□□□ -1.45
SPG11-205ENST00000558080 MFNGO00587 321 aa6□□□□□ -1.45
SPG11-205ENST00000558080 PRAF2O60831 178 aa6□□□□□ -1.45
SPG11-205ENST00000558080 OR2F2O95006 317 aa6□□□□□ -1.45
SPG11-205ENST00000558080 NDUFB6O95139 128 aa6□□□□□ -1.45
SPG11-205ENST00000558080 RAB3DO95716 219 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms