RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 PRRC2AP48634 2157 aaKnown RBP13.73□□□□□ -0.21
SNX1-203ENST00000558040 ARHGAP32A7KAX9 2087 aa13.73□□□□□ -0.21
SNX1-203ENST00000558040 TACC2O95359 2948 aa13.73□□□□□ -0.21
SNX1-203ENST00000558040 hCG_2014768A0A024R1R8 64 aa13.73□□□□□ -0.21
SNX1-203ENST00000558040 A0A0A6YYJ9 748 aa13.73□□□□□ -0.21
SNX1-203ENST00000558040 C3orf85A0A1B0GTC6 90 aa13.73□□□□□ -0.21
SNX1-203ENST00000558040 RNASEK-C17orf49H0YIS7 233 aa13.73□□□□□ -0.21
SNX1-203ENST00000558040 M0R1X1 148 aa13.73□□□□□ -0.21
SNX1-203ENST00000558040 DUS4LO95620 317 aaKnown RBP13.73□□□□□ -0.21
SNX1-203ENST00000558040 F2RP25116 425 aa13.73□□□□□ -0.21
SNX1-203ENST00000558040 CEACAM3P40198 252 aa13.73□□□□□ -0.21
SNX1-203ENST00000558040 UBE2E1P51965 193 aa13.73□□□□□ -0.21
SNX1-203ENST00000558040 PRB3Q04118 309 aaPredicted RBP13.73□□□□□ -0.21
SNX1-203ENST00000558040 KLRD1Q13241 179 aa13.73□□□□□ -0.21
SNX1-203ENST00000558040 RPL39P5Q59GN2 51 aa13.73□□□□□ -0.21
SNX1-203ENST00000558040 HCP5Q6MZN7 132 aa13.73□□□□□ -0.21
SNX1-203ENST00000558040 ZNF833PQ6ZTB9 187 aa13.73□□□□□ -0.21
SNX1-203ENST00000558040 LHX4Q969G2 390 aa13.73□□□□□ -0.21
SNX1-203ENST00000558040 ADTRPQ96IZ2 230 aa13.73□□□□□ -0.21
SNX1-203ENST00000558040 OR51J1Q9H342 316 aa13.73□□□□□ -0.21
SNX1-203ENST00000558040 C7orf69Q9H7B7 122 aa13.73□□□□□ -0.21
SNX1-203ENST00000558040 ZNRD1Q9P1U0 126 aa13.73□□□□□ -0.21
SNX1-203ENST00000558040 HECTD1Q9ULT8 2610 aa13.73□□□□□ -0.21
SNX1-203ENST00000558040 VGLL3A8MV65 326 aa13.72□□□□□ -0.21
SNX1-203ENST00000558040 ODF3BA8MYP8 253 aa13.72□□□□□ -0.21
SNX1-203ENST00000558040 H0Y980 276 aa13.72□□□□□ -0.21
SNX1-203ENST00000558040 BUB1B-PAK6H3BSN5 160 aa13.72□□□□□ -0.21
SNX1-203ENST00000558040 ZNF16P17020 682 aaPredicted RBP13.72□□□□□ -0.21
SNX1-203ENST00000558040 HTR1DP28221 377 aa13.72□□□□□ -0.21
SNX1-203ENST00000558040 THBS3P49746 956 aa13.72□□□□□ -0.21
SNX1-203ENST00000558040 LGALS4P56470 323 aa13.72□□□□□ -0.21
SNX1-203ENST00000558040 SUPT4H1P63272 117 aaKnown RBP13.72□□□□□ -0.21
SNX1-203ENST00000558040 EIF4EBP1Q13541 118 aaPredicted RBP13.72□□□□□ -0.21
SNX1-203ENST00000558040 SLC9A3R2Q15599 337 aa13.72□□□□□ -0.21
SNX1-203ENST00000558040 TCTEX1D1Q8N7M0 179 aa13.72□□□□□ -0.21
SNX1-203ENST00000558040 OR52B4Q8NGK2 314 aa13.72□□□□□ -0.21
SNX1-203ENST00000558040 OR4P4Q8NGL7 312 aa13.72□□□□□ -0.21
SNX1-203ENST00000558040 OR51H1Q8NH63 302 aa13.72□□□□□ -0.21
SNX1-203ENST00000558040 COQ8AQ8NI60 647 aa13.72□□□□□ -0.21
SNX1-203ENST00000558040 CASTOR1Q8WTX7 329 aa13.72□□□□□ -0.21
SNX1-203ENST00000558040 TCTEX1D2Q8WW35 142 aa13.72□□□□□ -0.21
SNX1-203ENST00000558040 C5orf30Q96GV9 206 aa13.72□□□□□ -0.21
SNX1-203ENST00000558040 PHB2Q99623 299 aa13.72□□□□□ -0.21
SNX1-203ENST00000558040 PRELID3BQ9Y3B1 194 aa13.72□□□□□ -0.21
SNX1-203ENST00000558040 PIGBOS1A0A0B4J2F0 54 aa13.71□□□□□ -0.21
SNX1-203ENST00000558040 A0A1B0GVG6 124 aa13.71□□□□□ -0.21
SNX1-203ENST00000558040 LEUTXA8MZ59 168 aa13.71□□□□□ -0.21
SNX1-203ENST00000558040 TXNL1O43396 289 aa13.71□□□□□ -0.21
SNX1-203ENST00000558040 SSNA1O43805 119 aa13.71□□□□□ -0.21
SNX1-203ENST00000558040 OR5AC1P0C628 307 aa13.71□□□□□ -0.21
SNX1-203ENST00000558040 DUTP33316 252 aaKnown RBP13.71□□□□□ -0.21
SNX1-203ENST00000558040 SRPXP78539 464 aa13.71□□□□□ -0.21
SNX1-203ENST00000558040 MINOS1Q5TGZ0 78 aa13.71□□□□□ -0.21
SNX1-203ENST00000558040 MITD1Q8WV92 249 aa13.71□□□□□ -0.21
SNX1-203ENST00000558040 ZNF251Q9BRH9 671 aa13.71□□□□□ -0.21
SNX1-203ENST00000558040 DPM3Q9P2X0 92 aa13.71□□□□□ -0.21
SNX1-203ENST00000558040 TBL2Q9Y4P3 447 aaKnown RBP13.71□□□□□ -0.21
SNX1-203ENST00000558040 MINOS1-NBL1R4GNA1 71 aa13.71□□□□□ -0.21
SNX1-203ENST00000558040 CR1P17927 2039 aa13.71□□□□□ -0.22
SNX1-203ENST00000558040 A0A0B4J2A0 478 aa13.7□□□□□ -0.22
SNX1-203ENST00000558040 SMAD7O15105 426 aaKnown RBP13.7□□□□□ -0.22
SNX1-203ENST00000558040 EPHA1P21709 976 aa13.7□□□□□ -0.22
SNX1-203ENST00000558040 KIR2DS2P43631 304 aa13.7□□□□□ -0.22
SNX1-203ENST00000558040 TGIF2LXQ8IUE1 241 aa13.7□□□□□ -0.22
SNX1-203ENST00000558040 PDZD9Q8IXQ8 264 aa13.7□□□□□ -0.22
SNX1-203ENST00000558040 C12orf45Q8N5I9 185 aaPredicted RBP13.7□□□□□ -0.22
SNX1-203ENST00000558040 CD300LFQ8TDQ1 290 aa13.7□□□□□ -0.22
SNX1-203ENST00000558040 ST6GALNAC6Q969X2 333 aa13.7□□□□□ -0.22
SNX1-203ENST00000558040 RPEQ96AT9 228 aa13.7□□□□□ -0.22
SNX1-203ENST00000558040 TP53RKQ96S44 253 aa13.7□□□□□ -0.22
SNX1-203ENST00000558040 GPHA2Q96T91 129 aa13.7□□□□□ -0.22
SNX1-203ENST00000558040 MED28Q9H204 178 aa13.7□□□□□ -0.22
SNX1-203ENST00000558040 FAM212BQ9NTI7 297 aaPredicted RBP13.7□□□□□ -0.22
SNX1-203ENST00000558040 SHPKQ9UHJ6 478 aa13.7□□□□□ -0.22
SNX1-203ENST00000558040 ABCA2Q9BZC7 2435 aa13.7□□□□□ -0.22
SNX1-203ENST00000558040 NBPF19A0A087WUL8 3843 aa13.69□□□□□ -0.22
SNX1-203ENST00000558040 PROP1O75360 226 aa13.69□□□□□ -0.22
SNX1-203ENST00000558040 GAPDHP04406 335 aaKnown RBP13.69□□□□□ -0.22
SNX1-203ENST00000558040 SERPINE2P07093 398 aa13.69□□□□□ -0.22
SNX1-203ENST00000558040 TAGLNQ01995 201 aaKnown RBP13.69□□□□□ -0.22
SNX1-203ENST00000558040 TMEM187Q14656 261 aa13.69□□□□□ -0.22
SNX1-203ENST00000558040 SP6Q3SY56 376 aa13.69□□□□□ -0.22
SNX1-203ENST00000558040 MIDNQ504T8 468 aa13.69□□□□□ -0.22
SNX1-203ENST00000558040 GPR157Q5UAW9 335 aa13.69□□□□□ -0.22
SNX1-203ENST00000558040 LGI3Q8N145 548 aa13.69□□□□□ -0.22
SNX1-203ENST00000558040 CIARTQ8N365 385 aaPredicted RBP13.69□□□□□ -0.22
SNX1-203ENST00000558040 DRAXINQ8NBI3 349 aaPredicted RBP13.69□□□□□ -0.22
SNX1-203ENST00000558040 TMEM222Q9H0R3 208 aa13.69□□□□□ -0.22
SNX1-203ENST00000558040 TRAV40A0A0B4J280 105 aa13.68□□□□□ -0.22
SNX1-203ENST00000558040 IGHV1-69DA0A0B4J2H0 117 aa13.68□□□□□ -0.22
SNX1-203ENST00000558040 CENPVL3A0A0U1RRI6 287 aa13.68□□□□□ -0.22
SNX1-203ENST00000558040 LINC00473A8K010 186 aa13.68□□□□□ -0.22
SNX1-203ENST00000558040 OOSP1A8MZH6 123 aa13.68□□□□□ -0.22
SNX1-203ENST00000558040 LY6LH3BQJ8 138 aa13.68□□□□□ -0.22
SNX1-203ENST00000558040 NPFFO15130 113 aa13.68□□□□□ -0.22
SNX1-203ENST00000558040 IGHV1-69P01742 117 aa13.68□□□□□ -0.22
SNX1-203ENST00000558040 APOA2P02652 100 aa13.68□□□□□ -0.22
SNX1-203ENST00000558040 UCP1P25874 307 aa13.68□□□□□ -0.22
SNX1-203ENST00000558040 RRAS2P62070 204 aaPredicted RBP13.68□□□□□ -0.22
SNX1-203ENST00000558040 RPL30P62888 115 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms