RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 ZNF251Q9BRH9 671 aa17.13■□□□□ 0.33
CASC4-204ENST00000557945 MRPL20Q9BYC9 149 aaKnown RBP17.13■□□□□ 0.33
CASC4-204ENST00000557945 ESM1Q9NQ30 184 aa17.13■□□□□ 0.33
CASC4-204ENST00000557945 SDHAF2Q9NX18 166 aa17.13■□□□□ 0.33
CASC4-204ENST00000557945 A0A0A6YYJ9 748 aa17.12■□□□□ 0.33
CASC4-204ENST00000557945 IGHV3-72A0A0B4J1Y9 119 aa17.12■□□□□ 0.33
CASC4-204ENST00000557945 M0R1X1 148 aa17.12■□□□□ 0.33
CASC4-204ENST00000557945 AMY2AP04746 511 aa17.12■□□□□ 0.33
CASC4-204ENST00000557945 CD24P25063 80 aa17.12■□□□□ 0.33
CASC4-204ENST00000557945 AP3S2P59780 193 aa17.12■□□□□ 0.33
CASC4-204ENST00000557945 SLC9A3R2Q15599 337 aa17.12■□□□□ 0.33
CASC4-204ENST00000557945 LY6EQ16553 131 aa17.12■□□□□ 0.33
CASC4-204ENST00000557945 ZNF57Q68EA5 555 aaPredicted RBP17.12■□□□□ 0.33
CASC4-204ENST00000557945 ZNF660Q6AZW8 331 aaPredicted RBP17.12■□□□□ 0.33
CASC4-204ENST00000557945 FAAP20Q6NZ36 180 aa17.12■□□□□ 0.33
CASC4-204ENST00000557945 ZNF645Q8N7E2 425 aa17.12■□□□□ 0.33
CASC4-204ENST00000557945 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.12■□□□□ 0.33
CASC4-204ENST00000557945 OR5R1Q8NH85 324 aa17.12■□□□□ 0.33
CASC4-204ENST00000557945 CAPSLQ8WWF8 208 aa17.12■□□□□ 0.33
CASC4-204ENST00000557945 SLC5A7Q9GZV3 580 aa17.12■□□□□ 0.33
CASC4-204ENST00000557945 SETD2Q9BYW2 2564 aaPredicted RBP17.12■□□□□ 0.33
CASC4-204ENST00000557945 JMJD1CQ15652 2540 aa17.11■□□□□ 0.33
CASC4-204ENST00000557945 NIPBLQ6KC79 2804 aaeCLIP17.11■□□□□ 0.337e-6■□□□□ 10.5
CASC4-204ENST00000557945 VENTXO95231 258 aa17.11■□□□□ 0.33
CASC4-204ENST00000557945 DYNLT3P51808 116 aa17.11■□□□□ 0.33
CASC4-204ENST00000557945 ARRDC1Q8N5I2 433 aa17.11■□□□□ 0.33
CASC4-204ENST00000557945 ZDHHC22Q8N966 263 aa17.11■□□□□ 0.33
CASC4-204ENST00000557945 DRAXINQ8NBI3 349 aaPredicted RBP17.11■□□□□ 0.33
CASC4-204ENST00000557945 OR4C16Q8NGL9 310 aa17.11■□□□□ 0.33
CASC4-204ENST00000557945 MOB3AQ96BX8 217 aa17.11■□□□□ 0.33
CASC4-204ENST00000557945 WDR12Q9GZL7 423 aaKnown RBP17.11■□□□□ 0.33
CASC4-204ENST00000557945 POMT1Q9Y6A1 747 aa17.11■□□□□ 0.33
CASC4-204ENST00000557945 DISC1C4P0D8 188 aa17.1■□□□□ 0.33
CASC4-204ENST00000557945 SLC22A5O76082 557 aa17.1■□□□□ 0.33
CASC4-204ENST00000557945 KLF9Q13886 244 aaPredicted RBP17.1■□□□□ 0.33
CASC4-204ENST00000557945 ZNF846Q147U1 533 aa17.1■□□□□ 0.33
CASC4-204ENST00000557945 SCGB2B2Q4G0G5 96 aa17.1■□□□□ 0.33
CASC4-204ENST00000557945 TMEM86BQ8N661 226 aa17.1■□□□□ 0.33
CASC4-204ENST00000557945 PIFOQ8TCI5 191 aa17.1■□□□□ 0.33
CASC4-204ENST00000557945 CFHR4Q92496 578 aa17.1■□□□□ 0.33
CASC4-204ENST00000557945 NABP2Q9BQ15 211 aa17.1■□□□□ 0.33
CASC4-204ENST00000557945 CCL28Q9NRJ3 127 aa17.1■□□□□ 0.33
CASC4-204ENST00000557945 MCUBQ9NWR8 336 aa17.1■□□□□ 0.33
CASC4-204ENST00000557945 GAB2Q9UQC2 676 aa17.1■□□□□ 0.33
CASC4-204ENST00000557945 PROP1O75360 226 aa17.09■□□□□ 0.33
CASC4-204ENST00000557945 FAM106CPP0CH98 169 aa17.09■□□□□ 0.33
CASC4-204ENST00000557945 CT45A6P0DMU7 189 aa17.09■□□□□ 0.33
CASC4-204ENST00000557945 CT45A5P0DMU8 189 aa17.09■□□□□ 0.33
CASC4-204ENST00000557945 CT45A7P0DMV0 189 aa17.09■□□□□ 0.33
CASC4-204ENST00000557945 FAUP35544 74 aaKnown RBP17.09■□□□□ 0.33
CASC4-204ENST00000557945 SRSF2Q01130 221 aaKnown RBP17.09■□□□□ 0.33
CASC4-204ENST00000557945 GLDNQ6ZMI3 551 aaPredicted RBP17.09■□□□□ 0.33
CASC4-204ENST00000557945 C5orf30Q96GV9 206 aa17.09■□□□□ 0.33
CASC4-204ENST00000557945 FXYD6Q9H0Q3 95 aa17.09■□□□□ 0.33
CASC4-204ENST00000557945 LINC00854A0A1B0GVQ3 168 aa17.08■□□□□ 0.32
CASC4-204ENST00000557945 OR5H14A6NHG9 310 aa17.08■□□□□ 0.32
CASC4-204ENST00000557945 SNRNP70P08621 437 aaKnown RBP17.08■□□□□ 0.32
CASC4-204ENST00000557945 IL7P13232 177 aa17.08■□□□□ 0.32
CASC4-204ENST00000557945 PPP5CP53041 499 aa17.08■□□□□ 0.32
CASC4-204ENST00000557945 LSAMPQ13449 338 aa17.08■□□□□ 0.32
CASC4-204ENST00000557945 HES1Q14469 280 aa17.08■□□□□ 0.32
CASC4-204ENST00000557945 CHIAQ9BZP6 476 aa17.08■□□□□ 0.32
CASC4-204ENST00000557945 VPREB3Q9UKI3 123 aa17.08■□□□□ 0.32
CASC4-204ENST00000557945 CLDN34H7C241 214 aa17.07■□□□□ 0.32
CASC4-204ENST00000557945 IGKV1D-33P01593 117 aa17.07■□□□□ 0.32
CASC4-204ENST00000557945 IGKV1-33P01594 117 aa17.07■□□□□ 0.32
CASC4-204ENST00000557945 ZNF735P0CB33 412 aa17.07■□□□□ 0.32
CASC4-204ENST00000557945 CD1BP29016 333 aa17.07■□□□□ 0.32
CASC4-204ENST00000557945 LINC00205P59089 165 aa17.07■□□□□ 0.32
CASC4-204ENST00000557945 UBA52P62987 128 aaKnown RBP17.07■□□□□ 0.32
CASC4-204ENST00000557945 CCDC32Q9BV29 185 aa17.07■□□□□ 0.32
CASC4-204ENST00000557945 HRASLSQ9HDD0 168 aa17.07■□□□□ 0.32
CASC4-204ENST00000557945 PITPNC1Q9UKF7 332 aa17.07■□□□□ 0.32
CASC4-204ENST00000557945 TCF19Q9Y242 345 aa17.07■□□□□ 0.32
CASC4-204ENST00000557945 IGLV2-14P01704 120 aa17.06■□□□□ 0.32
CASC4-204ENST00000557945 PGAM2P15259 253 aa17.06■□□□□ 0.32
CASC4-204ENST00000557945 CD40LGP29965 261 aa17.06■□□□□ 0.32
CASC4-204ENST00000557945 HABP2Q14520 560 aaPredicted RBP17.06■□□□□ 0.32
CASC4-204ENST00000557945 HNF4GQ14541 408 aa17.06■□□□□ 0.32
CASC4-204ENST00000557945 AADACL3Q5VUY0 350 aa17.06■□□□□ 0.32
CASC4-204ENST00000557945 PRIMA1Q86XR5 153 aa17.06■□□□□ 0.32
CASC4-204ENST00000557945 TMEM219Q86XT9 240 aa17.06■□□□□ 0.32
CASC4-204ENST00000557945 ZNF383Q8NA42 475 aa17.06■□□□□ 0.32
CASC4-204ENST00000557945 OR51S1Q8NGJ8 323 aa17.06■□□□□ 0.32
CASC4-204ENST00000557945 TERB2Q8NHR7 220 aa17.06■□□□□ 0.32
CASC4-204ENST00000557945 BORCS5Q969J3 196 aa17.06■□□□□ 0.32
CASC4-204ENST00000557945 ZFHX3Q15911 3703 aa17.06■□□□□ 0.32
CASC4-204ENST00000557945 A6NDX4 124 aa17.05■□□□□ 0.32
CASC4-204ENST00000557945 FAM90A9PA6NNJ1 464 aa17.05■□□□□ 0.32
CASC4-204ENST00000557945 H7C2Y5 167 aa17.05■□□□□ 0.32
CASC4-204ENST00000557945 TRIM77I1YAP6 450 aa17.05■□□□□ 0.32
CASC4-204ENST00000557945 TNFSF12O43508 249 aa17.05■□□□□ 0.32
CASC4-204ENST00000557945 TMEM11P17152 192 aa17.05■□□□□ 0.32
CASC4-204ENST00000557945 GNRHRP30968 328 aa17.05■□□□□ 0.32
CASC4-204ENST00000557945 THBS3P49746 956 aa17.05■□□□□ 0.32
CASC4-204ENST00000557945 MSMO1Q15800 293 aa17.05■□□□□ 0.32
CASC4-204ENST00000557945 LPCAT3Q6P1A2 487 aa17.05■□□□□ 0.32
CASC4-204ENST00000557945 ZNF818PQ6ZRF7 136 aa17.05■□□□□ 0.32
CASC4-204ENST00000557945 LHFPL1Q86WI0 220 aa17.05■□□□□ 0.32
CASC4-204ENST00000557945 THNSL2Q86YJ6 484 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms