RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 LUMP51884 338 aaPredicted RBP20.44■□□□□ 0.86
SMAD6-202ENST00000557916 RAG2P55895 527 aa20.44■□□□□ 0.86
SMAD6-202ENST00000557916 EBI3Q14213 229 aa20.44■□□□□ 0.86
SMAD6-202ENST00000557916 C16orf82Q7Z2V1 217 aa20.44■□□□□ 0.86
SMAD6-202ENST00000557916 OR5H2Q8NGV7 314 aa20.44■□□□□ 0.86
SMAD6-202ENST00000557916 FCAMRQ8WWV6 532 aa20.44■□□□□ 0.86
SMAD6-202ENST00000557916 AKR1E2Q96JD6 320 aa20.44■□□□□ 0.86
SMAD6-202ENST00000557916 SLC25A33Q9BSK2 321 aa20.44■□□□□ 0.86
SMAD6-202ENST00000557916 KLK11Q9UBX7 282 aa20.44■□□□□ 0.86
SMAD6-202ENST00000557916 FABP12A6NFH5 140 aa20.43■□□□□ 0.86
SMAD6-202ENST00000557916 CT45A6P0DMU7 189 aa20.43■□□□□ 0.86
SMAD6-202ENST00000557916 CT45A5P0DMU8 189 aa20.43■□□□□ 0.86
SMAD6-202ENST00000557916 CT45A7P0DMV0 189 aa20.43■□□□□ 0.86
SMAD6-202ENST00000557916 RFX2P48378 723 aa20.43■□□□□ 0.86
SMAD6-202ENST00000557916 MRPS10P82664 201 aaKnown RBP20.43■□□□□ 0.86
SMAD6-202ENST00000557916 FOXL1Q12952 345 aa20.43■□□□□ 0.86
SMAD6-202ENST00000557916 Q6ZSV7 163 aa20.43■□□□□ 0.86
SMAD6-202ENST00000557916 OVCH2Q7RTZ1 564 aa20.43■□□□□ 0.86
SMAD6-202ENST00000557916 OR2T10Q8NGZ9 312 aa20.43■□□□□ 0.86
SMAD6-202ENST00000557916 EAF1Q96JC9 268 aaPredicted RBP20.43■□□□□ 0.86
SMAD6-202ENST00000557916 NPFFR1Q9GZQ6 430 aa20.43■□□□□ 0.86
SMAD6-202ENST00000557916 SDHAF2Q9NX18 166 aa20.43■□□□□ 0.86
SMAD6-202ENST00000557916 EHFQ9NZC4 300 aa20.43■□□□□ 0.86
SMAD6-202ENST00000557916 A6NHS1 94 aa20.42■□□□□ 0.86
SMAD6-202ENST00000557916 GABARAPH6UMI1 98 aa20.42■□□□□ 0.86
SMAD6-202ENST00000557916 RBBP9O75884 186 aa20.42■□□□□ 0.86
SMAD6-202ENST00000557916 DGCR2P98153 550 aa20.42■□□□□ 0.86
SMAD6-202ENST00000557916 OR4F5Q8NH21 305 aa20.42■□□□□ 0.86
SMAD6-202ENST00000557916 SOSTQ9BQB4 213 aa20.42■□□□□ 0.86
SMAD6-202ENST00000557916 MTFP1Q9UDX5 166 aa20.42■□□□□ 0.86
SMAD6-202ENST00000557916 M0R1X1 148 aa20.41■□□□□ 0.86
SMAD6-202ENST00000557916 MOSP00540 346 aa20.41■□□□□ 0.86
SMAD6-202ENST00000557916 AADACP22760 399 aa20.41■□□□□ 0.86
SMAD6-202ENST00000557916 HRH1P35367 487 aa20.41■□□□□ 0.86
SMAD6-202ENST00000557916 ACTBP60709 375 aa20.41■□□□□ 0.86
SMAD6-202ENST00000557916 FAM131AQ6UXB0 335 aa20.41■□□□□ 0.86
SMAD6-202ENST00000557916 GLDNQ6ZMI3 551 aaPredicted RBP20.41■□□□□ 0.86
SMAD6-202ENST00000557916 DRAXINQ8NBI3 349 aaPredicted RBP20.41■□□□□ 0.86
SMAD6-202ENST00000557916 OR4C13Q8NGP0 309 aa20.41■□□□□ 0.86
SMAD6-202ENST00000557916 GIMAP1Q8WWP7 306 aa20.41■□□□□ 0.86
SMAD6-202ENST00000557916 RBMXL1Q96E39 390 aaKnown RBP20.41■□□□□ 0.86
SMAD6-202ENST00000557916 IGKV1D-13A0A0B4J2D9 117 aa20.4■□□□□ 0.86
SMAD6-202ENST00000557916 TSPAN9O75954 239 aa20.4■□□□□ 0.86
SMAD6-202ENST00000557916 IGKV1-13P0DP09 117 aa20.4■□□□□ 0.86
SMAD6-202ENST00000557916 DYRK1AQ13627 763 aa20.4■□□□□ 0.86
SMAD6-202ENST00000557916 C5orf30Q96GV9 206 aa20.4■□□□□ 0.86
SMAD6-202ENST00000557916 RANBP3Q9H6Z4 567 aaPredicted RBP20.4■□□□□ 0.86
SMAD6-202ENST00000557916 CTDSPLO15194 276 aa20.39■□□□□ 0.85
SMAD6-202ENST00000557916 PPYP01298 95 aa20.39■□□□□ 0.85
SMAD6-202ENST00000557916 MDKP21741 143 aaPredicted RBP20.39■□□□□ 0.85
SMAD6-202ENST00000557916 Q8N6K4 173 aa20.39■□□□□ 0.85
SMAD6-202ENST00000557916 ZNF645Q8N7E2 425 aa20.39■□□□□ 0.85
SMAD6-202ENST00000557916 SMIM4Q8WVI0 70 aa20.39■□□□□ 0.85
SMAD6-202ENST00000557916 BEX1Q9HBH7 125 aa20.39■□□□□ 0.85
SMAD6-202ENST00000557916 MOB4Q9Y3A3 225 aa20.39■□□□□ 0.85
SMAD6-202ENST00000557916 OR5H14A6NHG9 310 aa20.38■□□□□ 0.85
SMAD6-202ENST00000557916 SLC22A5O76082 557 aa20.38■□□□□ 0.85
SMAD6-202ENST00000557916 COMPP49747 757 aaPredicted RBP20.38■□□□□ 0.85
SMAD6-202ENST00000557916 AWAT1Q58HT5 328 aa20.38■□□□□ 0.85
SMAD6-202ENST00000557916 DHRS11Q6UWP2 260 aa20.38■□□□□ 0.85
SMAD6-202ENST00000557916 OR5AN1Q8NGI8 311 aa20.38■□□□□ 0.85
SMAD6-202ENST00000557916 C16orf95Q9H693 158 aa20.38■□□□□ 0.85
SMAD6-202ENST00000557916 H0YJW9 148 aa20.37■□□□□ 0.85
SMAD6-202ENST00000557916 M0QZK8 103 aa20.37■□□□□ 0.85
SMAD6-202ENST00000557916 MC5RP33032 325 aa20.37■□□□□ 0.85
SMAD6-202ENST00000557916 LINC00205P59089 165 aa20.37■□□□□ 0.85
SMAD6-202ENST00000557916 BLCAPP62952 87 aa20.37■□□□□ 0.85
SMAD6-202ENST00000557916 CCDC190Q86UF4 302 aa20.37■□□□□ 0.85
SMAD6-202ENST00000557916 ZNF383Q8NA42 475 aa20.37■□□□□ 0.85
SMAD6-202ENST00000557916 OR6Q1Q8NGQ2 317 aa20.37■□□□□ 0.85
SMAD6-202ENST00000557916 ZNF2Q9BSG1 426 aaPredicted RBP20.37■□□□□ 0.85
SMAD6-202ENST00000557916 A0A1B0GUS0 222 aa20.36■□□□□ 0.85
SMAD6-202ENST00000557916 FXYD4P59646 89 aa20.36■□□□□ 0.85
SMAD6-202ENST00000557916 HERV-K104P61576 105 aa20.36■□□□□ 0.85
SMAD6-202ENST00000557916 SSBP1Q04837 148 aaKnown RBP20.36■□□□□ 0.85
SMAD6-202ENST00000557916 ACTBL2Q562R1 376 aa20.36■□□□□ 0.85
SMAD6-202ENST00000557916 ZNF660Q6AZW8 331 aaPredicted RBP20.36■□□□□ 0.85
SMAD6-202ENST00000557916 OR6F1Q8NGZ6 308 aa20.36■□□□□ 0.85
SMAD6-202ENST00000557916 LINC01006Q8NI28 216 aa20.36■□□□□ 0.85
SMAD6-202ENST00000557916 SECTM1Q8WVN6 248 aa20.36■□□□□ 0.85
SMAD6-202ENST00000557916 PRSS22Q9GZN4 317 aa20.36■□□□□ 0.85
SMAD6-202ENST00000557916 MMP24Q9Y5R2 645 aa20.36■□□□□ 0.85
SMAD6-202ENST00000557916 CLPSL1A2RUU4 121 aa20.36■□□□□ 0.85
SMAD6-202ENST00000557916 NCBP2LA6PVI3 153 aaKnown RBP20.36■□□□□ 0.85
SMAD6-202ENST00000557916 H7C2Y5 167 aa20.36■□□□□ 0.85
SMAD6-202ENST00000557916 C12orf54Q6X4T0 127 aa20.36■□□□□ 0.85
SMAD6-202ENST00000557916 ZNF702PQ9H963 129 aa20.36■□□□□ 0.85
SMAD6-202ENST00000557916 BATF3Q9NR55 127 aa20.36■□□□□ 0.85
SMAD6-202ENST00000557916 RBMX2Q9Y388 322 aaKnown RBP20.36■□□□□ 0.85
SMAD6-202ENST00000557916 WASHC3Q9Y3C0 194 aa20.36■□□□□ 0.85
SMAD6-202ENST00000557916 V9GYH0 126 aa20.36■□□□□ 0.85
SMAD6-202ENST00000557916 M0QYG6 137 aa20.35■□□□□ 0.85
SMAD6-202ENST00000557916 FGF16O43320 207 aa20.35■□□□□ 0.85
SMAD6-202ENST00000557916 GSTZ1O43708 216 aaPredicted RBP20.35■□□□□ 0.85
SMAD6-202ENST00000557916 IGLV2-14P01704 120 aa20.35■□□□□ 0.85
SMAD6-202ENST00000557916 CD3DP04234 171 aa20.35■□□□□ 0.85
SMAD6-202ENST00000557916 AMY1AP04745 511 aa20.35■□□□□ 0.85
SMAD6-202ENST00000557916 AMY2AP04746 511 aa20.35■□□□□ 0.85
SMAD6-202ENST00000557916 THBS3P49746 956 aa20.35■□□□□ 0.85
SMAD6-202ENST00000557916 TSPAN5P62079 268 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms