RNA–Protein interactions for RNA: ENST00000557765.1

GABRB3-213, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-213ENST00000557765 A0A096LNT2 108 aa8.59□□□□□ -1.03
GABRB3-213ENST00000557765 IGKV1D-13A0A0B4J2D9 117 aa8.59□□□□□ -1.03
GABRB3-213ENST00000557765 ODF3BA8MYP8 253 aa8.59□□□□□ -1.03
GABRB3-213ENST00000557765 BUB1B-PAK6H3BSN5 160 aa8.59□□□□□ -1.03
GABRB3-213ENST00000557765 PHF1O43189 567 aaPredicted RBP8.59□□□□□ -1.03
GABRB3-213ENST00000557765 OR2A4O95047 310 aa8.59□□□□□ -1.03
GABRB3-213ENST00000557765 HRASP01112 189 aa8.59□□□□□ -1.03
GABRB3-213ENST00000557765 IGLV2-14P01704 120 aa8.59□□□□□ -1.03
GABRB3-213ENST00000557765 GIPP09681 153 aaPredicted RBP8.59□□□□□ -1.03
GABRB3-213ENST00000557765 SULT1A3P0DMM9 295 aa8.59□□□□□ -1.03
GABRB3-213ENST00000557765 SULT1A4P0DMN0 295 aa8.59□□□□□ -1.03
GABRB3-213ENST00000557765 IGKV1-13P0DP09 117 aa8.59□□□□□ -1.03
GABRB3-213ENST00000557765 MMP9P14780 707 aa8.59□□□□□ -1.03
GABRB3-213ENST00000557765 CCL3L1P16619 93 aa8.59□□□□□ -1.03
GABRB3-213ENST00000557765 ANXA7P20073 488 aaKnown RBP8.59□□□□□ -1.03
GABRB3-213ENST00000557765 DUTP33316 252 aaKnown RBP8.59□□□□□ -1.03
GABRB3-213ENST00000557765 LGALS7P47929 136 aa8.59□□□□□ -1.03
GABRB3-213ENST00000557765 DYNLT3P51808 116 aa8.59□□□□□ -1.03
GABRB3-213ENST00000557765 LGALS4P56470 323 aa8.59□□□□□ -1.03
GABRB3-213ENST00000557765 RAP2BP61225 183 aa8.59□□□□□ -1.03
GABRB3-213ENST00000557765 SUPT4H1P63272 117 aaKnown RBP8.59□□□□□ -1.03
GABRB3-213ENST00000557765 HOXA4Q00056 320 aaPredicted RBP8.59□□□□□ -1.03
GABRB3-213ENST00000557765 EIF4EBP1Q13541 118 aaPredicted RBP8.59□□□□□ -1.03
GABRB3-213ENST00000557765 POU2AF1Q16633 256 aa8.59□□□□□ -1.03
GABRB3-213ENST00000557765 PRAMEF5Q5TYX0 476 aa8.59□□□□□ -1.03
GABRB3-213ENST00000557765 DCAF12L2Q5VW00 463 aa8.59□□□□□ -1.03
GABRB3-213ENST00000557765 TBC1D26Q86UD7 250 aa8.59□□□□□ -1.03
GABRB3-213ENST00000557765 AKAP14Q86UN6 197 aa8.59□□□□□ -1.03
GABRB3-213ENST00000557765 TGIF2LXQ8IUE1 241 aa8.59□□□□□ -1.03
GABRB3-213ENST00000557765 ZNF695Q8IW36 515 aa8.59□□□□□ -1.03
GABRB3-213ENST00000557765 OR8H1Q8NGG4 311 aa8.59□□□□□ -1.03
GABRB3-213ENST00000557765 OR5AN1Q8NGI8 311 aa8.59□□□□□ -1.03
GABRB3-213ENST00000557765 OR4C13Q8NGP0 309 aa8.59□□□□□ -1.03
GABRB3-213ENST00000557765 GLYATL2Q8WU03 294 aa8.59□□□□□ -1.03
GABRB3-213ENST00000557765 ST6GALNAC6Q969X2 333 aa8.59□□□□□ -1.03
GABRB3-213ENST00000557765 TMEM230Q96A57 120 aa8.59□□□□□ -1.03
GABRB3-213ENST00000557765 OR2A7Q96R45 310 aa8.59□□□□□ -1.03
GABRB3-213ENST00000557765 NMES1Q9C002 83 aa8.59□□□□□ -1.03
GABRB3-213ENST00000557765 CCL28Q9NRJ3 127 aa8.59□□□□□ -1.03
GABRB3-213ENST00000557765 GCN1Q92616 2671 aaKnown RBP8.58□□□□□ -1.04
GABRB3-213ENST00000557765 A0A1B0GU03 582 aa8.58□□□□□ -1.04
GABRB3-213ENST00000557765 FAM90A26D6RGX4 464 aa8.58□□□□□ -1.04
GABRB3-213ENST00000557765 PFDN1O60925 122 aa8.58□□□□□ -1.04
GABRB3-213ENST00000557765 TSPAN9O75954 239 aa8.58□□□□□ -1.04
GABRB3-213ENST00000557765 SPDEFO95238 335 aa8.58□□□□□ -1.04
GABRB3-213ENST00000557765 SPNP16150 400 aa8.58□□□□□ -1.04
GABRB3-213ENST00000557765 ZNF16P17020 682 aaPredicted RBP8.58□□□□□ -1.04
GABRB3-213ENST00000557765 HABP2Q14520 560 aaPredicted RBP8.58□□□□□ -1.04
GABRB3-213ENST00000557765 TMEM187Q14656 261 aa8.58□□□□□ -1.04
GABRB3-213ENST00000557765 CYB5R2Q6BCY4 276 aa8.58□□□□□ -1.04
GABRB3-213ENST00000557765 TCTE3Q8IZS6 198 aa8.58□□□□□ -1.04
GABRB3-213ENST00000557765 LYG1Q8N1E2 194 aa8.58□□□□□ -1.04
GABRB3-213ENST00000557765 Q8N7P7 452 aa8.58□□□□□ -1.04
GABRB3-213ENST00000557765 OR5M8Q8NGP6 311 aa8.58□□□□□ -1.04
GABRB3-213ENST00000557765 OR4A5Q8NH83 315 aa8.58□□□□□ -1.04
GABRB3-213ENST00000557765 MSI2Q96DH6 328 aaKnown RBP8.58□□□□□ -1.04
GABRB3-213ENST00000557765 RRNAD1Q96FB5 475 aaKnown RBP8.58□□□□□ -1.04
GABRB3-213ENST00000557765 TMPRSS13Q9BYE2 586 aa8.58□□□□□ -1.04
GABRB3-213ENST00000557765 RANBP3Q9H6Z4 567 aaPredicted RBP8.58□□□□□ -1.04
GABRB3-213ENST00000557765 FLVCR2Q9UPI3 526 aa8.58□□□□□ -1.04
GABRB3-213ENST00000557765 AUP1Q9Y679 476 aa8.58□□□□□ -1.04
GABRB3-213ENST00000557765 USF3Q68DE3 2245 aa8.58□□□□□ -1.04
GABRB3-213ENST00000557765 MALRD1Q5VYJ5 2156 aa8.58□□□□□ -1.04
GABRB3-213ENST00000557765 DOPEY2Q9Y3R5 2298 aa8.57□□□□□ -1.04
GABRB3-213ENST00000557765 DCHS2Q6V1P9 2916 aa8.57□□□□□ -1.04
GABRB3-213ENST00000557765 UNC79Q9P2D8 2635 aa8.57□□□□□ -1.04
GABRB3-213ENST00000557765 DOCK11Q5JSL3 2073 aa8.57□□□□□ -1.04
GABRB3-213ENST00000557765 SAA2-SAA4A0A096LPE2 208 aa8.57□□□□□ -1.04
GABRB3-213ENST00000557765 TRAV39A0A0B4J263 110 aa8.57□□□□□ -1.04
GABRB3-213ENST00000557765 TFF1P04155 84 aa8.57□□□□□ -1.04
GABRB3-213ENST00000557765 SAA2P0DJI9 122 aaPredicted RBP8.57□□□□□ -1.04
GABRB3-213ENST00000557765 VSIG10L2P0DP72 767 aa8.57□□□□□ -1.04
GABRB3-213ENST00000557765 FOSL1P15407 271 aa8.57□□□□□ -1.04
GABRB3-213ENST00000557765 NQO2P16083 231 aa8.57□□□□□ -1.04
GABRB3-213ENST00000557765 C4BPBP20851 252 aa8.57□□□□□ -1.04
GABRB3-213ENST00000557765 OMGP23515 440 aa8.57□□□□□ -1.04
GABRB3-213ENST00000557765 ZFP36P26651 326 aaKnown RBP8.57□□□□□ -1.04
GABRB3-213ENST00000557765 CD1BP29016 333 aa8.57□□□□□ -1.04
GABRB3-213ENST00000557765 BRS3P32247 399 aa8.57□□□□□ -1.04
GABRB3-213ENST00000557765 ZNF134P52741 427 aa8.57□□□□□ -1.04
GABRB3-213ENST00000557765 ATP5IP56385 69 aaPredicted RBP8.57□□□□□ -1.04
GABRB3-213ENST00000557765 KRTAP10-9P60411 292 aa8.57□□□□□ -1.04
GABRB3-213ENST00000557765 ERVK-16P61578 105 aa8.57□□□□□ -1.04
GABRB3-213ENST00000557765 ARF6P62330 175 aa8.57□□□□□ -1.04
GABRB3-213ENST00000557765 LCN2P80188 198 aa8.57□□□□□ -1.04
GABRB3-213ENST00000557765 BAMBIQ13145 260 aa8.57□□□□□ -1.04
GABRB3-213ENST00000557765 GNMTQ14749 295 aa8.57□□□□□ -1.04
GABRB3-213ENST00000557765 GPR157Q5UAW9 335 aa8.57□□□□□ -1.04
GABRB3-213ENST00000557765 THOC7Q6I9Y2 204 aaKnown RBP8.57□□□□□ -1.04
GABRB3-213ENST00000557765 GSG1LQ6UXU4 331 aa8.57□□□□□ -1.04
GABRB3-213ENST00000557765 THNSL2Q86YJ6 484 aa8.57□□□□□ -1.04
GABRB3-213ENST00000557765 ODF3L1Q8IXM7 274 aa8.57□□□□□ -1.04
GABRB3-213ENST00000557765 OR51H1Q8NH63 302 aa8.57□□□□□ -1.04
GABRB3-213ENST00000557765 DDB2Q92466 427 aa8.57□□□□□ -1.04
GABRB3-213ENST00000557765 RPEQ96AT9 228 aa8.57□□□□□ -1.04
GABRB3-213ENST00000557765 ZNF251Q9BRH9 671 aa8.57□□□□□ -1.04
GABRB3-213ENST00000557765 TMEM160Q9NX00 188 aa8.57□□□□□ -1.04
GABRB3-213ENST00000557765 FKBP11Q9NYL4 201 aa8.57□□□□□ -1.04
GABRB3-213ENST00000557765 ANKRD17O75179 2603 aaKnown RBP8.57□□□□□ -1.04
GABRB3-213ENST00000557765 LRBAP50851 2863 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms