RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 DIRAS3O95661 229 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 IFNA1P01562 189 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 IFNA5P01569 189 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 OPN1MWP04001 364 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 OPN1MW2P0DN77 364 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 OPN1MW3P0DN78 364 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 SPTBP11277 2137 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 GABRR1P24046 479 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 ATP6V0CP27449 155 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 S100GP29377 79 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 PPP1CCP36873 323 aaKnown RBP3.93□□□□□ -1.78
ATXN3-246ENST00000557030 NKX2-1P43699 371 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-246ENST00000557030 GLIPR1P48060 266 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 HNRNPKP61978 463 aaKnown RBP eCLIP3.93□□□□□ -1.78
ATXN3-246ENST00000557030 HIST1H3AP68431 136 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 HLA-DRB3P79483 266 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 DLK1P80370 383 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 H3F3AP84243 136 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 IL24Q13007 206 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 UBE2V2Q15819 145 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 TAF9Q16594 264 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 PLPPR5Q32ZL2 321 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 TMEM176BQ3YBM2 270 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-246ENST00000557030 ACSF3Q4G176 576 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-246ENST00000557030 PYY3Q5JQD4 70 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 NCMAPQ5T1S8 102 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 TMEM211Q6ICI0 200 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 ASCL4Q6XD76 172 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 SSX9Q7RTT3 188 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 C6orf201Q7Z4U5 140 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 LYZL2Q7Z4W2 148 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 DPPA2Q7Z7J5 298 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 RTN4RL2Q86UN3 420 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 HIST3H2BBQ8N257 126 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 ZNF383Q8NA42 475 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 HSD17B11Q8NBQ5 300 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 IL22RA2Q969J5 263 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 TOMM40LQ969M1 308 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 SLAMF9Q96A28 289 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 CLDN23Q96B33 292 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 ZNF501Q96CX3 271 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-246ENST00000557030 RAB39BQ96DA2 213 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 FBXO17Q96EF6 278 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 TECTBQ96PL2 329 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 P2RX4Q99571 388 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 PIGQQ9BRB3 760 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 C20orf24Q9BUV8 137 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 EMC6Q9BV81 110 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 PARP12Q9H0J9 701 aaKnown RBP3.93□□□□□ -1.78
ATXN3-246ENST00000557030 TMEM222Q9H0R3 208 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 WFDC1Q9HC57 220 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 SLC2A9Q9NRM0 540 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 LYRM2Q9NU23 88 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-246ENST00000557030 IL36GQ9NZH8 169 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 DOK5Q9P104 306 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 DKKL1Q9UK85 242 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 MCTS1Q9ULC4 181 aaKnown RBP3.93□□□□□ -1.78
ATXN3-246ENST00000557030 PIGLQ9Y2B2 252 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 WSB1Q9Y6I7 421 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 CHD6Q8TD26 2715 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 RIF1Q5UIP0 2472 aaKnown RBP3.93□□□□□ -1.78
ATXN3-246ENST00000557030 EML5Q05BV3 1969 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 HEATR5AQ86XA9 2040 aa3.92□□□□□ -1.78
ATXN3-246ENST00000557030 WDR87Q6ZQQ6 2873 aa3.92□□□□□ -1.78
ATXN3-246ENST00000557030 C3orf85A0A1B0GTC6 90 aa3.92□□□□□ -1.78
ATXN3-246ENST00000557030 LRP5LA4QPB2 252 aa3.92□□□□□ -1.78
ATXN3-246ENST00000557030 ARGFXA6NJG6 315 aa3.92□□□□□ -1.78
ATXN3-246ENST00000557030 MKRN2OSH3BPM6 223 aa3.92□□□□□ -1.78
ATXN3-246ENST00000557030 M0R135 149 aa3.92□□□□□ -1.78
ATXN3-246ENST00000557030 NTN3O00634 580 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-246ENST00000557030 TP53I11O14683 189 aa3.92□□□□□ -1.78
ATXN3-246ENST00000557030 RER1O15258 196 aa3.92□□□□□ -1.78
ATXN3-246ENST00000557030 PHF1O43189 567 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-246ENST00000557030 XRCC2O43543 280 aa3.92□□□□□ -1.78
ATXN3-246ENST00000557030 SPRY1O43609 319 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-246ENST00000557030 PDCD6O75340 191 aa3.92□□□□□ -1.78
ATXN3-246ENST00000557030 YIF1AO95070 293 aa3.92□□□□□ -1.78
ATXN3-246ENST00000557030 GAS8-AS1O95177 125 aa3.92□□□□□ -1.78
ATXN3-246ENST00000557030 CYB5R3P00387 301 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-246ENST00000557030 CTXN2P0C2S0 81 aa3.92□□□□□ -1.78
ATXN3-246ENST00000557030 FAM106CPP0CH98 169 aa3.92□□□□□ -1.78
ATXN3-246ENST00000557030 SLC25A6P12236 298 aa3.92□□□□□ -1.78
ATXN3-246ENST00000557030 FGF7P21781 194 aa3.92□□□□□ -1.78
ATXN3-246ENST00000557030 OTX1P32242 354 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-246ENST00000557030 GPX4P36969 197 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-246ENST00000557030 NOVA1P51513 510 aaKnown RBP3.92□□□□□ -1.78
ATXN3-246ENST00000557030 RND2P52198 227 aa3.92□□□□□ -1.78
ATXN3-246ENST00000557030 TAS2R30P59541 319 aa3.92□□□□□ -1.78
ATXN3-246ENST00000557030 RPL23AP62750 156 aaKnown RBP3.92□□□□□ -1.78
ATXN3-246ENST00000557030 MFAP5Q13361 173 aa3.92□□□□□ -1.78
ATXN3-246ENST00000557030 RAB35Q15286 201 aa3.92□□□□□ -1.78
ATXN3-246ENST00000557030 ELOBQ15370 118 aa3.92□□□□□ -1.78
ATXN3-246ENST00000557030 TGIF1Q15583 401 aa3.92□□□□□ -1.78
ATXN3-246ENST00000557030 EXT1Q16394 746 aa3.92□□□□□ -1.78
ATXN3-246ENST00000557030 C1orf189Q5VU69 101 aa3.92□□□□□ -1.78
ATXN3-246ENST00000557030 CARD17Q5XLA6 110 aa3.92□□□□□ -1.78
ATXN3-246ENST00000557030 OR2T2Q6IF00 324 aa3.92□□□□□ -1.78
ATXN3-246ENST00000557030 RBPMS2Q6ZRY4 209 aaKnown RBP3.92□□□□□ -1.78
ATXN3-246ENST00000557030 Q6ZS49 121 aa3.92□□□□□ -1.78
ATXN3-246ENST00000557030 LANCL3Q6ZV70 420 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms