RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 IGHV3-43A0A0B4J1X8 118 aa4.12□□□□□ -1.75
ATXN3-245ENST00000556958 TRAV39A0A0B4J263 110 aa4.12□□□□□ -1.75
ATXN3-245ENST00000556958 IGHV4-28A0A0C4DH34 117 aa4.12□□□□□ -1.75
ATXN3-245ENST00000556958 A0A1B0GTI1 187 aa4.12□□□□□ -1.75
ATXN3-245ENST00000556958 FAM220BPB1ANY3 271 aa4.12□□□□□ -1.75
ATXN3-245ENST00000556958 C15orf65H3BRN8 121 aa4.12□□□□□ -1.75
ATXN3-245ENST00000556958 NDUFAB1O14561 156 aa4.12□□□□□ -1.75
ATXN3-245ENST00000556958 TSPAN4O14817 238 aa4.12□□□□□ -1.75
ATXN3-245ENST00000556958 SLC31A2O15432 143 aa4.12□□□□□ -1.75
ATXN3-245ENST00000556958 GADD45GO95257 159 aa4.12□□□□□ -1.75
ATXN3-245ENST00000556958 FADS2O95864 444 aaKnown RBP4.12□□□□□ -1.75
ATXN3-245ENST00000556958 CA1P00915 261 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-245ENST00000556958 CA2P00918 260 aa4.12□□□□□ -1.75
ATXN3-245ENST00000556958 IGHV3-43DP0DP04 118 aa4.12□□□□□ -1.75
ATXN3-245ENST00000556958 DBTP11182 482 aaKnown RBP4.12□□□□□ -1.75
ATXN3-245ENST00000556958 ZNF134P52741 427 aa4.12□□□□□ -1.75
ATXN3-245ENST00000556958 MED21Q13503 144 aa4.12□□□□□ -1.75
ATXN3-245ENST00000556958 EXOSC2Q13868 293 aaKnown RBP4.12□□□□□ -1.75
ATXN3-245ENST00000556958 GLYATQ6IB77 296 aa4.12□□□□□ -1.75
ATXN3-245ENST00000556958 BTNL8Q6UX41 500 aa4.12□□□□□ -1.75
ATXN3-245ENST00000556958 SAXO1Q8IYX7 474 aa4.12□□□□□ -1.75
ATXN3-245ENST00000556958 Q8NAQ8 132 aa4.12□□□□□ -1.75
ATXN3-245ENST00000556958 OR2T33Q8NG76 320 aa4.12□□□□□ -1.75
ATXN3-245ENST00000556958 CNIH3Q8TBE1 160 aa4.12□□□□□ -1.75
ATXN3-245ENST00000556958 CACNG8Q8WXS5 425 aa4.12□□□□□ -1.75
ATXN3-245ENST00000556958 C8orf49Q96NF6 230 aa4.12□□□□□ -1.75
ATXN3-245ENST00000556958 HOPXQ9BPY8 73 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-245ENST00000556958 SULT4A1Q9BR01 284 aa4.12□□□□□ -1.75
ATXN3-245ENST00000556958 ATG101Q9BSB4 218 aa4.12□□□□□ -1.75
ATXN3-245ENST00000556958 FUZQ9BT04 418 aa4.12□□□□□ -1.75
ATXN3-245ENST00000556958 CHRDL1Q9BU40 450 aa4.12□□□□□ -1.75
ATXN3-245ENST00000556958 C1orf43Q9BWL3 253 aa4.12□□□□□ -1.75
ATXN3-245ENST00000556958 TSSK6Q9BXA6 273 aa4.12□□□□□ -1.75
ATXN3-245ENST00000556958 MRPL20Q9BYC9 149 aaKnown RBP4.12□□□□□ -1.75
ATXN3-245ENST00000556958 YIPF3Q9GZM5 350 aa4.12□□□□□ -1.75
ATXN3-245ENST00000556958 CHST5Q9GZS9 411 aa4.12□□□□□ -1.75
ATXN3-245ENST00000556958 C5orf66Q9H5L9 145 aa4.12□□□□□ -1.75
ATXN3-245ENST00000556958 NEK6Q9HC98 313 aa4.12□□□□□ -1.75
ATXN3-245ENST00000556958 IL1RAPQ9NPH3 570 aa4.12□□□□□ -1.75
ATXN3-245ENST00000556958 CMC2Q9NRP2 79 aa4.12□□□□□ -1.75
ATXN3-245ENST00000556958 ARL8BQ9NVJ2 186 aa4.12□□□□□ -1.75
ATXN3-245ENST00000556958 CMTM6Q9NX76 183 aa4.12□□□□□ -1.75
ATXN3-245ENST00000556958 MRPL27Q9P0M9 148 aaKnown RBP4.12□□□□□ -1.75
ATXN3-245ENST00000556958 RCC2Q9P258 522 aaKnown RBP4.12□□□□□ -1.75
ATXN3-245ENST00000556958 METTL1Q9UBP6 276 aaKnown RBP4.12□□□□□ -1.75
ATXN3-245ENST00000556958 TAGLN3Q9UI15 199 aa4.12□□□□□ -1.75
ATXN3-245ENST00000556958 ING4Q9UNL4 249 aa4.12□□□□□ -1.75
ATXN3-245ENST00000556958 AP3M1Q9Y2T2 418 aa4.12□□□□□ -1.75
ATXN3-245ENST00000556958 EXOSC1Q9Y3B2 195 aaKnown RBP4.12□□□□□ -1.75
ATXN3-245ENST00000556958 SELENOKQ9Y6D0 94 aa4.12□□□□□ -1.75
ATXN3-245ENST00000556958 TMEM14AQ9Y6G1 99 aa4.12□□□□□ -1.75
ATXN3-245ENST00000556958 V9GYQ6 96 aa4.12□□□□□ -1.75
ATXN3-245ENST00000556958 AGRNO00468 2067 aa4.12□□□□□ -1.75
ATXN3-245ENST00000556958 TRAV24A0A0B4J272 114 aa4.11□□□□□ -1.75
ATXN3-245ENST00000556958 TMEM30CPA0ZSE6 113 aa4.11□□□□□ -1.75
ATXN3-245ENST00000556958 ARPC2O15144 300 aa4.11□□□□□ -1.75
ATXN3-245ENST00000556958 SYT7O43581 403 aa4.11□□□□□ -1.75
ATXN3-245ENST00000556958 SELENOFO60613 162 aa4.11□□□□□ -1.75
ATXN3-245ENST00000556958 MRPS14O60783 128 aaKnown RBP4.11□□□□□ -1.75
ATXN3-245ENST00000556958 OXTP01178 125 aa4.11□□□□□ -1.75
ATXN3-245ENST00000556958 GSTT2P0CG29 244 aa4.11□□□□□ -1.75
ATXN3-245ENST00000556958 GSTT2BP0CG30 244 aa4.11□□□□□ -1.75
ATXN3-245ENST00000556958 MYOD1P15172 320 aa4.11□□□□□ -1.75
ATXN3-245ENST00000556958 ZNF20P17024 532 aa4.11□□□□□ -1.75
ATXN3-245ENST00000556958 MNAT1P51948 309 aa4.11□□□□□ -1.75
ATXN3-245ENST00000556958 RHOGP84095 191 aa4.11□□□□□ -1.75
ATXN3-245ENST00000556958 CDK5R1Q15078 307 aa4.11□□□□□ -1.75
ATXN3-245ENST00000556958 ZSCAN26Q16670 478 aa4.11□□□□□ -1.75
ATXN3-245ENST00000556958 C12orf74Q32Q52 190 aa4.11□□□□□ -1.75
ATXN3-245ENST00000556958 ODF3L2Q3SX64 289 aa4.11□□□□□ -1.75
ATXN3-245ENST00000556958 ZNF585BQ52M93 769 aa4.11□□□□□ -1.75
ATXN3-245ENST00000556958 TMEM41BQ5BJD5 291 aa4.11□□□□□ -1.75
ATXN3-245ENST00000556958 COQ5Q5HYK3 327 aa4.11□□□□□ -1.75
ATXN3-245ENST00000556958 SLC25A30Q5SVS4 291 aa4.11□□□□□ -1.75
ATXN3-245ENST00000556958 GLT8D1Q68CQ7 371 aa4.11□□□□□ -1.75
ATXN3-245ENST00000556958 RASSF6Q6ZTQ3 369 aa4.11□□□□□ -1.75
ATXN3-245ENST00000556958 ARPINQ7Z6K5 226 aa4.11□□□□□ -1.75
ATXN3-245ENST00000556958 SERPINA12Q8IW75 414 aa4.11□□□□□ -1.75
ATXN3-245ENST00000556958 DEFB107AQ8IZN7 70 aa4.11□□□□□ -1.75
ATXN3-245ENST00000556958 ZNF439Q8NDP4 499 aa4.11□□□□□ -1.75
ATXN3-245ENST00000556958 OR1L1Q8NH94 360 aa4.11□□□□□ -1.75
ATXN3-245ENST00000556958 KCNG3Q8TAE7 436 aa4.11□□□□□ -1.75
ATXN3-245ENST00000556958 PLPPR1Q8TBJ4 325 aa4.11□□□□□ -1.75
ATXN3-245ENST00000556958 SPSB1Q96BD6 273 aa4.11□□□□□ -1.75
ATXN3-245ENST00000556958 MRPS24Q96EL2 167 aaKnown RBP4.11□□□□□ -1.75
ATXN3-245ENST00000556958 NR1H4Q96RI1 486 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-245ENST00000556958 TSNAXQ99598 290 aaKnown RBP4.11□□□□□ -1.75
ATXN3-245ENST00000556958 OR52A1Q9UKL2 312 aa4.11□□□□□ -1.75
ATXN3-245ENST00000556958 IKZF2Q9UKS7 526 aa4.11□□□□□ -1.75
ATXN3-245ENST00000556958 SNX5Q9Y5X3 404 aa4.11□□□□□ -1.75
ATXN3-245ENST00000556958 IGKV1-12A0A0C4DH73 117 aa4.1□□□□□ -1.75
ATXN3-245ENST00000556958 TMEM213A2RRL7 107 aa4.1□□□□□ -1.75
ATXN3-245ENST00000556958 OR5H14A6NHG9 310 aa4.1□□□□□ -1.75
ATXN3-245ENST00000556958 C15orf61A6NNL5 157 aa4.1□□□□□ -1.75
ATXN3-245ENST00000556958 A8MWP6 167 aa4.1□□□□□ -1.75
ATXN3-245ENST00000556958 H7C2Y5 167 aa4.1□□□□□ -1.75
ATXN3-245ENST00000556958 NME4O00746 187 aa4.1□□□□□ -1.75
ATXN3-245ENST00000556958 SULT1B1O43704 296 aa4.1□□□□□ -1.75
ATXN3-245ENST00000556958 SPDEFO95238 335 aa4.1□□□□□ -1.75
ATXN3-245ENST00000556958 FAM107AO95990 144 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms