RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 OR52L2PQ8NGH6 319 aa8.18□□□□□ -1.1
SHMT2-224ENST00000556737 EAF1Q96JC9 268 aaPredicted RBP8.18□□□□□ -1.1
SHMT2-224ENST00000556737 THAP7Q9BT49 309 aaPredicted RBP8.18□□□□□ -1.1
SHMT2-224ENST00000556737 PECRQ9BY49 303 aa8.18□□□□□ -1.1
SHMT2-224ENST00000556737 CHMP1AQ9HD42 196 aaPredicted RBP8.18□□□□□ -1.1
SHMT2-224ENST00000556737 GNG12Q9UBI6 72 aa8.18□□□□□ -1.1
SHMT2-224ENST00000556737 JPT1Q9UK76 154 aa8.18□□□□□ -1.1
SHMT2-224ENST00000556737 ZNF736B4DX44 427 aaPredicted RBP8.17□□□□□ -1.1
SHMT2-224ENST00000556737 GABARAPH6UMI1 98 aa8.17□□□□□ -1.1
SHMT2-224ENST00000556737 HLA-DQB1P01920 261 aa8.17□□□□□ -1.1
SHMT2-224ENST00000556737 GSTP1P09211 210 aaKnown RBP8.17□□□□□ -1.1
SHMT2-224ENST00000556737 IL7P13232 177 aa8.17□□□□□ -1.1
SHMT2-224ENST00000556737 IL3RAP26951 378 aa8.17□□□□□ -1.1
SHMT2-224ENST00000556737 PPP1CCP36873 323 aaKnown RBP8.17□□□□□ -1.1
SHMT2-224ENST00000556737 DEFA1P59665 94 aa8.17□□□□□ -1.1
SHMT2-224ENST00000556737 DEFA3P59666 94 aa8.17□□□□□ -1.1
SHMT2-224ENST00000556737 HTD2P86397 168 aa8.17□□□□□ -1.1
SHMT2-224ENST00000556737 HNF4GQ14541 408 aa8.17□□□□□ -1.1
SHMT2-224ENST00000556737 BAK1Q16611 211 aa8.17□□□□□ -1.1
SHMT2-224ENST00000556737 ZNF260Q3ZCT1 412 aa8.17□□□□□ -1.1
SHMT2-224ENST00000556737 MORN2Q502X0 79 aa8.17□□□□□ -1.1
SHMT2-224ENST00000556737 PLAC9Q5JTB6 97 aa8.17□□□□□ -1.1
SHMT2-224ENST00000556737 KPRPQ5T749 579 aaPredicted RBP8.17□□□□□ -1.1
SHMT2-224ENST00000556737 MOB3BQ86TA1 216 aa8.17□□□□□ -1.1
SHMT2-224ENST00000556737 ODF3L1Q8IXM7 274 aa8.17□□□□□ -1.1
SHMT2-224ENST00000556737 TOMM5Q8N4H5 51 aa8.17□□□□□ -1.1
SHMT2-224ENST00000556737 FAM89BQ8N5H3 189 aa8.17□□□□□ -1.1
SHMT2-224ENST00000556737 Q8N9W7 124 aa8.17□□□□□ -1.1
SHMT2-224ENST00000556737 OR52I2Q8NH67 350 aa8.17□□□□□ -1.1
SHMT2-224ENST00000556737 SETD6Q8TBK2 473 aa8.17□□□□□ -1.1
SHMT2-224ENST00000556737 NUDCD2Q8WVJ2 157 aa8.17□□□□□ -1.1
SHMT2-224ENST00000556737 SOSTQ9BQB4 213 aa8.17□□□□□ -1.1
SHMT2-224ENST00000556737 HDHD3Q9BSH5 251 aaPredicted RBP8.17□□□□□ -1.1
SHMT2-224ENST00000556737 FAAP24Q9BTP7 215 aa8.17□□□□□ -1.1
SHMT2-224ENST00000556737 ABHD14AQ9BUJ0 271 aa8.17□□□□□ -1.1
SHMT2-224ENST00000556737 RAB9BQ9NP90 201 aa8.17□□□□□ -1.1
SHMT2-224ENST00000556737 TRBV6-6A0A0A6YYG2 114 aa8.16□□□□□ -1.1
SHMT2-224ENST00000556737 A0A1W2PRX2 142 aa8.16□□□□□ -1.1
SHMT2-224ENST00000556737 CTDSPLO15194 276 aa8.16□□□□□ -1.1
SHMT2-224ENST00000556737 TXNL1O43396 289 aa8.16□□□□□ -1.1
SHMT2-224ENST00000556737 LANCL1O43813 399 aa8.16□□□□□ -1.1
SHMT2-224ENST00000556737 RBBP9O75884 186 aa8.16□□□□□ -1.1
SHMT2-224ENST00000556737 TPPPO94811 219 aa8.16□□□□□ -1.1
SHMT2-224ENST00000556737 IGHG2P01859 326 aa8.16□□□□□ -1.1
SHMT2-224ENST00000556737 GSTT2BP0CG30 244 aa8.16□□□□□ -1.1
SHMT2-224ENST00000556737 CD1BP29016 333 aa8.16□□□□□ -1.1
SHMT2-224ENST00000556737 PNLIPRP3Q17RR3 467 aa8.16□□□□□ -1.1
SHMT2-224ENST00000556737 C9orf152Q5JTZ5 239 aa8.16□□□□□ -1.1
SHMT2-224ENST00000556737 LY6G6FQ5SQ64 297 aa8.16□□□□□ -1.1
SHMT2-224ENST00000556737 TGIF2LXQ8IUE1 241 aa8.16□□□□□ -1.1
SHMT2-224ENST00000556737 POC5Q8NA72 575 aa8.16□□□□□ -1.1
SHMT2-224ENST00000556737 OR4F17Q8NGA8 305 aa8.16□□□□□ -1.1
SHMT2-224ENST00000556737 SMIM4Q8WVI0 70 aa8.16□□□□□ -1.1
SHMT2-224ENST00000556737 R3HDM4Q96D70 268 aa8.16□□□□□ -1.1
SHMT2-224ENST00000556737 NOL4LQ96MY1 436 aaPredicted RBP8.16□□□□□ -1.1
SHMT2-224ENST00000556737 OR4F4Q96R69 305 aa8.16□□□□□ -1.1
SHMT2-224ENST00000556737 SDHCQ99643 169 aaPredicted RBP8.16□□□□□ -1.1
SHMT2-224ENST00000556737 CMSS1Q9BQ75 279 aaKnown RBP8.16□□□□□ -1.1
SHMT2-224ENST00000556737 IFI27L2Q9H2X8 130 aa8.16□□□□□ -1.1
SHMT2-224ENST00000556737 SCPEP1Q9HB40 452 aa8.16□□□□□ -1.1
SHMT2-224ENST00000556737 PALMDQ9NP74 551 aa8.16□□□□□ -1.1
SHMT2-224ENST00000556737 OR2S2Q9NQN1 319 aa8.16□□□□□ -1.1
SHMT2-224ENST00000556737 PLSCR3Q9NRY6 295 aa8.16□□□□□ -1.1
SHMT2-224ENST00000556737 KCNIP1Q9NZI2 227 aa8.16□□□□□ -1.1
SHMT2-224ENST00000556737 AK3Q9UIJ7 227 aa8.16□□□□□ -1.1
SHMT2-224ENST00000556737 ELF5Q9UKW6 265 aaPredicted RBP8.16□□□□□ -1.1
SHMT2-224ENST00000556737 PSMB11A5LHX3 300 aa8.15□□□□□ -1.1
SHMT2-224ENST00000556737 SERPINE3A8MV23 424 aa8.15□□□□□ -1.1
SHMT2-224ENST00000556737 SULT1C2O00338 296 aa8.15□□□□□ -1.1
SHMT2-224ENST00000556737 MFNGO00587 321 aa8.15□□□□□ -1.1
SHMT2-224ENST00000556737 GSTZ1O43708 216 aaPredicted RBP8.15□□□□□ -1.1
SHMT2-224ENST00000556737 YPEL1O60688 119 aa8.15□□□□□ -1.1
SHMT2-224ENST00000556737 MOSP00540 346 aa8.15□□□□□ -1.1
SHMT2-224ENST00000556737 TMEM50BP56557 158 aa8.15□□□□□ -1.1
SHMT2-224ENST00000556737 AP3S2P59780 193 aa8.15□□□□□ -1.1
SHMT2-224ENST00000556737 ACTBP60709 375 aa8.15□□□□□ -1.1
SHMT2-224ENST00000556737 HACD4Q5VWC8 232 aa8.15□□□□□ -1.1
SHMT2-224ENST00000556737 STEAP3Q658P3 488 aa8.15□□□□□ -1.1
SHMT2-224ENST00000556737 MOB1BQ7L9L4 216 aa8.15□□□□□ -1.1
SHMT2-224ENST00000556737 CENPVQ7Z7K6 275 aaPredicted RBP8.15□□□□□ -1.1
SHMT2-224ENST00000556737 FAM71E2Q8N5Q1 922 aa8.15□□□□□ -1.1
SHMT2-224ENST00000556737 OR4X2Q8NGF9 303 aa8.15□□□□□ -1.1
SHMT2-224ENST00000556737 OR2T10Q8NGZ9 312 aa8.15□□□□□ -1.1
SHMT2-224ENST00000556737 YPEL2Q96QA6 119 aa8.15□□□□□ -1.1
SHMT2-224ENST00000556737 MRPL20Q9BYC9 149 aaKnown RBP8.15□□□□□ -1.1
SHMT2-224ENST00000556737 PARP12Q9H0J9 701 aaKnown RBP8.15□□□□□ -1.1
SHMT2-224ENST00000556737 LIN7CQ9NUP9 197 aaKnown RBP8.15□□□□□ -1.1
SHMT2-224ENST00000556737 HSF4Q9ULV5 492 aa8.15□□□□□ -1.1
SHMT2-224ENST00000556737 TSSC4Q9Y5U2 329 aaPredicted RBP8.15□□□□□ -1.1
SHMT2-224ENST00000556737 TGP01266 2768 aa8.15□□□□□ -1.11
SHMT2-224ENST00000556737 SAA2-SAA4A0A096LPE2 208 aa8.14□□□□□ -1.11
SHMT2-224ENST00000556737 TCRBV4S1A1TA0A5B7 111 aa8.14□□□□□ -1.11
SHMT2-224ENST00000556737 LINC01548A6NM66 108 aa8.14□□□□□ -1.11
SHMT2-224ENST00000556737 CENPXA8MT69 81 aa8.14□□□□□ -1.11
SHMT2-224ENST00000556737 SAA2P0DJI9 122 aaPredicted RBP8.14□□□□□ -1.11
SHMT2-224ENST00000556737 CBX5P45973 191 aa8.14□□□□□ -1.11
SHMT2-224ENST00000556737 GPR12P47775 334 aa8.14□□□□□ -1.11
SHMT2-224ENST00000556737 HLA-DRB3P79483 266 aa8.14□□□□□ -1.11
SHMT2-224ENST00000556737 RGS21Q2M5E4 152 aa8.14□□□□□ -1.11
SHMT2-224ENST00000556737 ETV3LQ6ZN32 361 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms