RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 TRBV5-7A0A0A0MS05 114 aa7.73□□□□□ -1.17
SCFD1-220ENST00000556486 IGHV3-43A0A0B4J1X8 118 aa7.73□□□□□ -1.17
SCFD1-220ENST00000556486 MAGEA13PA6NCF6 341 aa7.73□□□□□ -1.17
SCFD1-220ENST00000556486 LALBAP00709 142 aa7.73□□□□□ -1.17
SCFD1-220ENST00000556486 IGHV3-43DP0DP04 118 aa7.73□□□□□ -1.17
SCFD1-220ENST00000556486 CRIP2P52943 208 aaPredicted RBP7.73□□□□□ -1.17
SCFD1-220ENST00000556486 HTD2P86397 168 aa7.73□□□□□ -1.17
SCFD1-220ENST00000556486 ZNF616Q08AN1 781 aa7.73□□□□□ -1.17
SCFD1-220ENST00000556486 SMN1Q16637 294 aaKnown RBP7.73□□□□□ -1.17
SCFD1-220ENST00000556486 MORN2Q502X0 79 aa7.73□□□□□ -1.17
SCFD1-220ENST00000556486 OR2G6Q5TZ20 316 aa7.73□□□□□ -1.17
SCFD1-220ENST00000556486 RAB12Q6IQ22 244 aa7.73□□□□□ -1.17
SCFD1-220ENST00000556486 HAPLN4Q86UW8 402 aa7.73□□□□□ -1.17
SCFD1-220ENST00000556486 ODF3L1Q8IXM7 274 aa7.73□□□□□ -1.17
SCFD1-220ENST00000556486 ZNF491Q8N8L2 437 aa7.73□□□□□ -1.17
SCFD1-220ENST00000556486 MINDY2Q8NBR6 621 aa7.73□□□□□ -1.17
SCFD1-220ENST00000556486 NPBQ8NG41 125 aa7.73□□□□□ -1.17
SCFD1-220ENST00000556486 OR11H1Q8NG94 326 aa7.73□□□□□ -1.17
SCFD1-220ENST00000556486 UBALD1Q8TB05 177 aa7.73□□□□□ -1.17
SCFD1-220ENST00000556486 NEK7Q8TDX7 302 aa7.73□□□□□ -1.17
SCFD1-220ENST00000556486 CCDC107Q8WV48 283 aa7.73□□□□□ -1.17
SCFD1-220ENST00000556486 ISYNA1Q9NPH2 558 aa7.73□□□□□ -1.17
SCFD1-220ENST00000556486 JPT1Q9UK76 154 aa7.73□□□□□ -1.17
SCFD1-220ENST00000556486 TRAPPC2LQ9UL33 140 aa7.73□□□□□ -1.17
SCFD1-220ENST00000556486 VSIG4Q9Y279 399 aa7.73□□□□□ -1.17
SCFD1-220ENST00000556486 SPRY2O43597 315 aa7.72□□□□□ -1.17
SCFD1-220ENST00000556486 YPEL1O60688 119 aa7.72□□□□□ -1.17
SCFD1-220ENST00000556486 SAP30O75446 220 aa7.72□□□□□ -1.17
SCFD1-220ENST00000556486 NDUFA3O95167 84 aa7.72□□□□□ -1.17
SCFD1-220ENST00000556486 RCC1P18754 421 aaPredicted RBP7.72□□□□□ -1.17
SCFD1-220ENST00000556486 FUT3P21217 361 aa7.72□□□□□ -1.17
SCFD1-220ENST00000556486 ACTBP60709 375 aa7.72□□□□□ -1.17
SCFD1-220ENST00000556486 MED22Q15528 200 aa7.72□□□□□ -1.17
SCFD1-220ENST00000556486 MMDQ15546 238 aa7.72□□□□□ -1.17
SCFD1-220ENST00000556486 C6orf141Q5SZD1 244 aa7.72□□□□□ -1.17
SCFD1-220ENST00000556486 FAM27D1Q5T7N8 215 aa7.72□□□□□ -1.17
SCFD1-220ENST00000556486 SIGIRRQ6IA17 410 aa7.72□□□□□ -1.17
SCFD1-220ENST00000556486 FAM71F2Q6NXP2 309 aa7.72□□□□□ -1.17
SCFD1-220ENST00000556486 ZNF833PQ6ZTB9 187 aa7.72□□□□□ -1.17
SCFD1-220ENST00000556486 ZNF429Q86V71 674 aa7.72□□□□□ -1.17
SCFD1-220ENST00000556486 OR4K15Q8NH41 348 aa7.72□□□□□ -1.17
SCFD1-220ENST00000556486 OR1L1Q8NH94 360 aa7.72□□□□□ -1.17
SCFD1-220ENST00000556486 ORAI1Q96D31 301 aa7.72□□□□□ -1.17
SCFD1-220ENST00000556486 YPEL2Q96QA6 119 aa7.72□□□□□ -1.17
SCFD1-220ENST00000556486 TM2D3Q9BRN9 247 aa7.72□□□□□ -1.17
SCFD1-220ENST00000556486 UQCC2Q9BRT2 126 aa7.72□□□□□ -1.17
SCFD1-220ENST00000556486 ABHD14AQ9BUJ0 271 aa7.72□□□□□ -1.17
SCFD1-220ENST00000556486 KLK15Q9H2R5 256 aa7.72□□□□□ -1.17
SCFD1-220ENST00000556486 OR51J1Q9H342 316 aa7.72□□□□□ -1.17
SCFD1-220ENST00000556486 TAF9BQ9HBM6 251 aa7.72□□□□□ -1.17
SCFD1-220ENST00000556486 OR2S2Q9NQN1 319 aa7.72□□□□□ -1.17
SCFD1-220ENST00000556486 MRPS28Q9Y2Q9 187 aaKnown RBP7.72□□□□□ -1.17
SCFD1-220ENST00000556486 EXOSC1Q9Y3B2 195 aaKnown RBP7.72□□□□□ -1.17
SCFD1-220ENST00000556486 LRRC42Q9Y546 428 aa7.72□□□□□ -1.17
SCFD1-220ENST00000556486 IGHV7-81A0A0B4J1V7 117 aa7.71□□□□□ -1.18
SCFD1-220ENST00000556486 GP9P14770 177 aa7.71□□□□□ -1.18
SCFD1-220ENST00000556486 MGMTP16455 207 aa7.71□□□□□ -1.18
SCFD1-220ENST00000556486 MYL12AP19105 171 aa7.71□□□□□ -1.18
SCFD1-220ENST00000556486 RAB9AP51151 201 aa7.71□□□□□ -1.18
SCFD1-220ENST00000556486 ADARB1P78563 741 aaKnown RBP7.71□□□□□ -1.18
SCFD1-220ENST00000556486 C5orf64Q2M2E5 130 aa7.71□□□□□ -1.18
SCFD1-220ENST00000556486 TMEM65Q6PI78 240 aa7.71□□□□□ -1.18
SCFD1-220ENST00000556486 GLIPR1L1Q6UWM5 242 aa7.71□□□□□ -1.18
SCFD1-220ENST00000556486 TCTEX1D1Q8N7M0 179 aa7.71□□□□□ -1.18
SCFD1-220ENST00000556486 OR52L2PQ8NGH6 319 aa7.71□□□□□ -1.18
SCFD1-220ENST00000556486 OR10V1Q8NGI7 309 aa7.71□□□□□ -1.18
SCFD1-220ENST00000556486 OR1N2Q8NGR9 330 aa7.71□□□□□ -1.18
SCFD1-220ENST00000556486 OR13C5Q8NGS8 318 aa7.71□□□□□ -1.18
SCFD1-220ENST00000556486 GLMPQ8WWB7 406 aa7.71□□□□□ -1.18
SCFD1-220ENST00000556486 THRSPQ92748 146 aa7.71□□□□□ -1.18
SCFD1-220ENST00000556486 NABP2Q9BQ15 211 aa7.71□□□□□ -1.18
SCFD1-220ENST00000556486 GNB4Q9HAV0 340 aa7.71□□□□□ -1.18
SCFD1-220ENST00000556486 S100A14Q9HCY8 104 aa7.71□□□□□ -1.18
SCFD1-220ENST00000556486 RETNQ9HD89 108 aa7.71□□□□□ -1.18
SCFD1-220ENST00000556486 SMPD3Q9NY59 655 aaPredicted RBP7.71□□□□□ -1.18
SCFD1-220ENST00000556486 KIAA1456Q9P272 454 aa7.71□□□□□ -1.18
SCFD1-220ENST00000556486 GHRLQ9UBU3 117 aa7.71□□□□□ -1.18
SCFD1-220ENST00000556486 CLEC2DQ9UHP7 191 aa7.71□□□□□ -1.18
SCFD1-220ENST00000556486 PEX16Q9Y5Y5 336 aa7.71□□□□□ -1.18
SCFD1-220ENST00000556486 TRAV41A0A0B4J266 112 aa7.7□□□□□ -1.18
SCFD1-220ENST00000556486 NPIPB5A8MRT5 1133 aa7.7□□□□□ -1.18
SCFD1-220ENST00000556486 G3V318 75 aa7.7□□□□□ -1.18
SCFD1-220ENST00000556486 ATP6V0E1O15342 81 aa7.7□□□□□ -1.18
SCFD1-220ENST00000556486 NBR2O15453 112 aa7.7□□□□□ -1.18
SCFD1-220ENST00000556486 PDCD6O75340 191 aa7.7□□□□□ -1.18
SCFD1-220ENST00000556486 SLC2A2P11168 524 aaPredicted RBP7.7□□□□□ -1.18
SCFD1-220ENST00000556486 TAS2R43P59537 309 aa7.7□□□□□ -1.18
SCFD1-220ENST00000556486 GNB1P62873 340 aa7.7□□□□□ -1.18
SCFD1-220ENST00000556486 GABPB1Q06547 395 aaPredicted RBP7.7□□□□□ -1.18
SCFD1-220ENST00000556486 MED21Q13503 144 aa7.7□□□□□ -1.18
SCFD1-220ENST00000556486 AWAT2Q6E213 333 aa7.7□□□□□ -1.18
SCFD1-220ENST00000556486 CD200R1LQ6Q8B3 271 aa7.7□□□□□ -1.18
SCFD1-220ENST00000556486 JAGN1Q8N5M9 183 aa7.7□□□□□ -1.18
SCFD1-220ENST00000556486 MRPL30Q8TCC3 161 aaKnown RBP7.7□□□□□ -1.18
SCFD1-220ENST00000556486 DCUN1D4Q92564 292 aa7.7□□□□□ -1.18
SCFD1-220ENST00000556486 TMEM80Q96HE8 168 aa7.7□□□□□ -1.18
SCFD1-220ENST00000556486 RITA1Q96K30 269 aa7.7□□□□□ -1.18
SCFD1-220ENST00000556486 DERL3Q96Q80 235 aa7.7□□□□□ -1.18
SCFD1-220ENST00000556486 ZNF251Q9BRH9 671 aa7.7□□□□□ -1.18
SCFD1-220ENST00000556486 ELOVL1Q9BW60 279 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms