RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 H3BNX3 289 aa10.48□□□□□ -0.73
ACTN1-219ENST00000556432 CRTAPO75718 401 aaPredicted RBP10.48□□□□□ -0.73
ACTN1-219ENST00000556432 SC5DO75845 299 aa10.48□□□□□ -0.73
ACTN1-219ENST00000556432 NDUFB8O95169 186 aa10.48□□□□□ -0.73
ACTN1-219ENST00000556432 SPDEFO95238 335 aa10.48□□□□□ -0.73
ACTN1-219ENST00000556432 BAG2O95816 211 aa10.48□□□□□ -0.73
ACTN1-219ENST00000556432 MECP2P51608 486 aaKnown RBP10.48□□□□□ -0.73
ACTN1-219ENST00000556432 LY6G6FQ5SQ64 297 aa10.48□□□□□ -0.73
ACTN1-219ENST00000556432 DRAXINQ8NBI3 349 aaPredicted RBP10.48□□□□□ -0.73
ACTN1-219ENST00000556432 OR5AN1Q8NGI8 311 aa10.48□□□□□ -0.73
ACTN1-219ENST00000556432 ABHD14BQ96IU4 210 aa10.48□□□□□ -0.73
ACTN1-219ENST00000556432 USMG5Q96IX5 58 aa10.48□□□□□ -0.73
ACTN1-219ENST00000556432 CYYR1Q96J86 154 aa10.48□□□□□ -0.73
ACTN1-219ENST00000556432 PARP12Q9H0J9 701 aaKnown RBP10.48□□□□□ -0.73
ACTN1-219ENST00000556432 ERVK13-1Q9NX77 482 aa10.48□□□□□ -0.73
ACTN1-219ENST00000556432 CKLFQ9UBR5 152 aa10.48□□□□□ -0.73
ACTN1-219ENST00000556432 LRRC42Q9Y546 428 aa10.48□□□□□ -0.73
ACTN1-219ENST00000556432 GPX5O75715 221 aa10.47□□□□□ -0.73
ACTN1-219ENST00000556432 IGKV1-16P04430 117 aa10.47□□□□□ -0.73
ACTN1-219ENST00000556432 APELAP0DMC3 54 aa10.47□□□□□ -0.73
ACTN1-219ENST00000556432 MGMTP16455 207 aa10.47□□□□□ -0.73
ACTN1-219ENST00000556432 SNRPGP62308 76 aaKnown RBP10.47□□□□□ -0.73
ACTN1-219ENST00000556432 EWSR1Q01844 656 aaKnown RBP eCLIP10.47□□□□□ -0.73
ACTN1-219ENST00000556432 LYG2Q86SG7 212 aa10.47□□□□□ -0.73
ACTN1-219ENST00000556432 WDR89Q96FK6 387 aaPredicted RBP10.47□□□□□ -0.73
ACTN1-219ENST00000556432 PHB2Q99623 299 aa10.47□□□□□ -0.73
ACTN1-219ENST00000556432 AASSQ9UDR5 926 aa10.47□□□□□ -0.73
ACTN1-219ENST00000556432 OAZ3Q9UMX2 235 aa10.47□□□□□ -0.73
ACTN1-219ENST00000556432 ORC6Q9Y5N6 252 aa10.47□□□□□ -0.73
ACTN1-219ENST00000556432 SELENOKQ9Y6D0 94 aa10.47□□□□□ -0.73
ACTN1-219ENST00000556432 KMT2AQ03164 3969 aa10.47□□□□□ -0.73
ACTN1-219ENST00000556432 LOC102724200A0A096LPH7 203 aaPredicted RBP10.46□□□□□ -0.73
ACTN1-219ENST00000556432 FAM90A7PA6NKC0 464 aa10.46□□□□□ -0.73
ACTN1-219ENST00000556432 SAC3D1A6NKF1 404 aa10.46□□□□□ -0.73
ACTN1-219ENST00000556432 FAM90A23PA8MXZ1 464 aa10.46□□□□□ -0.73
ACTN1-219ENST00000556432 PDCD6O75340 191 aa10.46□□□□□ -0.73
ACTN1-219ENST00000556432 ATP5HO75947 161 aa10.46□□□□□ -0.73
ACTN1-219ENST00000556432 APOA2P02652 100 aa10.46□□□□□ -0.73
ACTN1-219ENST00000556432 GLAP06280 429 aa10.46□□□□□ -0.73
ACTN1-219ENST00000556432 DEFB114Q30KQ6 69 aa10.46□□□□□ -0.73
ACTN1-219ENST00000556432 SLC25A30Q5SVS4 291 aa10.46□□□□□ -0.73
ACTN1-219ENST00000556432 SETD6Q8TBK2 473 aa10.46□□□□□ -0.73
ACTN1-219ENST00000556432 CHMP1AQ9HD42 196 aaPredicted RBP10.46□□□□□ -0.73
ACTN1-219ENST00000556432 AP4S1Q9Y587 144 aa10.46□□□□□ -0.73
ACTN1-219ENST00000556432 GMPPBQ9Y5P6 360 aa10.46□□□□□ -0.73
ACTN1-219ENST00000556432 BMPR1BO00238 502 aa10.45□□□□□ -0.74
ACTN1-219ENST00000556432 PJVKQ0ZLH3 352 aa10.45□□□□□ -0.74
ACTN1-219ENST00000556432 EXOSC2Q13868 293 aaKnown RBP10.45□□□□□ -0.74
ACTN1-219ENST00000556432 HMGN3Q15651 99 aa10.45□□□□□ -0.74
ACTN1-219ENST00000556432 LGALS9CQ6DKI2 356 aa10.45□□□□□ -0.74
ACTN1-219ENST00000556432 SIGIRRQ6IA17 410 aa10.45□□□□□ -0.74
ACTN1-219ENST00000556432 OR52B4Q8NGK2 314 aa10.45□□□□□ -0.74
ACTN1-219ENST00000556432 OR13C5Q8NGS8 318 aa10.45□□□□□ -0.74
ACTN1-219ENST00000556432 THRSPQ92748 146 aa10.45□□□□□ -0.74
ACTN1-219ENST00000556432 FAM46BQ96A09 425 aa10.45□□□□□ -0.74
ACTN1-219ENST00000556432 TMEM68Q96MH6 324 aa10.45□□□□□ -0.74
ACTN1-219ENST00000556432 AMBNQ9NP70 447 aa10.45□□□□□ -0.74
ACTN1-219ENST00000556432 HECTD4Q9Y4D8 3996 aa10.45□□□□□ -0.74
ACTN1-219ENST00000556432 MPPED1O15442 326 aa10.44□□□□□ -0.74
ACTN1-219ENST00000556432 TUSC2O75896 110 aa10.44□□□□□ -0.74
ACTN1-219ENST00000556432 FCGR1AP12314 374 aa10.44□□□□□ -0.74
ACTN1-219ENST00000556432 FOLR2P14207 255 aa10.44□□□□□ -0.74
ACTN1-219ENST00000556432 RASSF2P50749 326 aa10.44□□□□□ -0.74
ACTN1-219ENST00000556432 RHOGP84095 191 aa10.44□□□□□ -0.74
ACTN1-219ENST00000556432 TNFRSF9Q07011 255 aa10.44□□□□□ -0.74
ACTN1-219ENST00000556432 C1orf146Q5VVC0 180 aa10.44□□□□□ -0.74
ACTN1-219ENST00000556432 XAF1Q6GPH4 301 aa10.44□□□□□ -0.74
ACTN1-219ENST00000556432 RPL22L1Q6P5R6 122 aaKnown RBP10.44□□□□□ -0.74
ACTN1-219ENST00000556432 PDPNQ86YL7 162 aa10.44□□□□□ -0.74
ACTN1-219ENST00000556432 Q96M66 194 aa10.44□□□□□ -0.74
ACTN1-219ENST00000556432 NEDD4LQ96PU5 975 aa10.44□□□□□ -0.74
ACTN1-219ENST00000556432 ZC4H2Q9NQZ6 224 aa10.44□□□□□ -0.74
ACTN1-219ENST00000556432 TECRQ9NZ01 308 aaKnown RBP10.44□□□□□ -0.74
ACTN1-219ENST00000556432 DNAH10Q8IVF4 4471 aa10.44□□□□□ -0.74
ACTN1-219ENST00000556432 TRAV8-7A0A075B6U6 113 aa10.43□□□□□ -0.74
ACTN1-219ENST00000556432 C2orf70A6NJV1 201 aa10.43□□□□□ -0.74
ACTN1-219ENST00000556432 EBAG9O00559 213 aa10.43□□□□□ -0.74
ACTN1-219ENST00000556432 SPRY2O43597 315 aa10.43□□□□□ -0.74
ACTN1-219ENST00000556432 RBMXL2O75526 392 aaKnown RBP10.43□□□□□ -0.74
ACTN1-219ENST00000556432 IGFBP3P17936 291 aaPredicted RBP10.43□□□□□ -0.74
ACTN1-219ENST00000556432 EDN2P20800 178 aa10.43□□□□□ -0.74
ACTN1-219ENST00000556432 BMI1P35226 326 aa10.43□□□□□ -0.74
ACTN1-219ENST00000556432 KIR2DS2P43631 304 aa10.43□□□□□ -0.74
ACTN1-219ENST00000556432 LINC00205P59089 165 aa10.43□□□□□ -0.74
ACTN1-219ENST00000556432 SSBP2P81877 361 aaPredicted RBP10.43□□□□□ -0.74
ACTN1-219ENST00000556432 ATP5G2Q06055 141 aa10.43□□□□□ -0.74
ACTN1-219ENST00000556432 DEFB135Q30KP9 77 aa10.43□□□□□ -0.74
ACTN1-219ENST00000556432 ZIK1Q3SY52 487 aaPredicted RBP10.43□□□□□ -0.74
ACTN1-219ENST00000556432 TMEM217Q8N7C4 229 aa10.43□□□□□ -0.74
ACTN1-219ENST00000556432 ZNF383Q8NA42 475 aa10.43□□□□□ -0.74
ACTN1-219ENST00000556432 PHLDA1Q8WV24 401 aaPredicted RBP10.43□□□□□ -0.74
ACTN1-219ENST00000556432 EDARADDQ8WWZ3 215 aa10.43□□□□□ -0.74
ACTN1-219ENST00000556432 ZNF221Q9UK13 617 aa10.43□□□□□ -0.74
ACTN1-219ENST00000556432 FAM223BA6NKX1 122 aa10.42□□□□□ -0.74
ACTN1-219ENST00000556432 PRH1P02810 166 aa10.42□□□□□ -0.74
ACTN1-219ENST00000556432 CEACAM6P40199 344 aa10.42□□□□□ -0.74
ACTN1-219ENST00000556432 CCDC58Q4VC31 144 aa10.42□□□□□ -0.74
ACTN1-219ENST00000556432 FAM223AQ8IWN6 122 aa10.42□□□□□ -0.74
ACTN1-219ENST00000556432 OR52I1Q8NGK6 324 aa10.42□□□□□ -0.74
ACTN1-219ENST00000556432 OR14A2Q96R54 314 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms