RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 COX6A1P12074 109 aa12.86□□□□□ -0.35
ARHGEF40-207ENST00000556399 USF1P22415 310 aaPredicted RBP12.86□□□□□ -0.35
ARHGEF40-207ENST00000556399 UBE2L3P68036 154 aaKnown RBP12.86□□□□□ -0.35
ARHGEF40-207ENST00000556399 FBXW9Q5XUX1 488 aa12.86□□□□□ -0.35
ARHGEF40-207ENST00000556399 ZADH2Q8N4Q0 377 aa12.86□□□□□ -0.35
ARHGEF40-207ENST00000556399 TMEM56Q96MV1 263 aa12.86□□□□□ -0.35
ARHGEF40-207ENST00000556399 ARRDC1-AS1Q9H2J1 176 aa12.86□□□□□ -0.35
ARHGEF40-207ENST00000556399 HES4Q9HCC6 221 aa12.86□□□□□ -0.35
ARHGEF40-207ENST00000556399 TMEM56-RWDD3S4R434 201 aa12.86□□□□□ -0.35
ARHGEF40-207ENST00000556399 RALGAPA1Q6GYQ0 2036 aa12.86□□□□□ -0.35
ARHGEF40-207ENST00000556399 HIST1H2BKO60814 126 aa12.86□□□□□ -0.35
ARHGEF40-207ENST00000556399 CNIH1O95406 144 aa12.86□□□□□ -0.35
ARHGEF40-207ENST00000556399 HIST1H2BJP06899 126 aa12.86□□□□□ -0.35
ARHGEF40-207ENST00000556399 LINC00271P0C7V0 271 aa12.86□□□□□ -0.35
ARHGEF40-207ENST00000556399 GZMHP20718 246 aa12.86□□□□□ -0.35
ARHGEF40-207ENST00000556399 HIST1H2BOP23527 126 aa12.86□□□□□ -0.35
ARHGEF40-207ENST00000556399 HIST1H2BBP33778 126 aa12.86□□□□□ -0.35
ARHGEF40-207ENST00000556399 OPRK1P41145 380 aa12.86□□□□□ -0.35
ARHGEF40-207ENST00000556399 HIST1H2BDP58876 126 aa12.86□□□□□ -0.35
ARHGEF40-207ENST00000556399 HIST1H2BCP62807 126 aa12.86□□□□□ -0.35
ARHGEF40-207ENST00000556399 PAFAH1B2P68402 229 aa12.86□□□□□ -0.35
ARHGEF40-207ENST00000556399 HIST2H2BEQ16778 126 aa12.86□□□□□ -0.35
ARHGEF40-207ENST00000556399 COX19Q49B96 90 aa12.86□□□□□ -0.35
ARHGEF40-207ENST00000556399 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.86□□□□□ -0.35
ARHGEF40-207ENST00000556399 STUMQ69YW2 141 aa12.86□□□□□ -0.35
ARHGEF40-207ENST00000556399 TEPPQ6URK8 271 aa12.86□□□□□ -0.35
ARHGEF40-207ENST00000556399 DNM1P46Q6ZS02 220 aa12.86□□□□□ -0.35
ARHGEF40-207ENST00000556399 OR1L1Q8NH94 360 aa12.86□□□□□ -0.35
ARHGEF40-207ENST00000556399 HIST1H2BHQ93079 126 aa12.86□□□□□ -0.35
ARHGEF40-207ENST00000556399 HIST1H2BNQ99877 126 aa12.86□□□□□ -0.35
ARHGEF40-207ENST00000556399 HIST1H2BMQ99879 126 aa12.86□□□□□ -0.35
ARHGEF40-207ENST00000556399 IL36GQ9NZH8 169 aa12.86□□□□□ -0.35
ARHGEF40-207ENST00000556399 ZG16O60844 167 aa12.86□□□□□ -0.35
ARHGEF40-207ENST00000556399 CT45A10P0DMU9 189 aa12.86□□□□□ -0.35
ARHGEF40-207ENST00000556399 OR5I1Q13606 314 aa12.86□□□□□ -0.35
ARHGEF40-207ENST00000556399 CBLN4Q9NTU7 201 aa12.86□□□□□ -0.35
ARHGEF40-207ENST00000556399 OR6C3Q9NZP0 311 aa12.86□□□□□ -0.35
ARHGEF40-207ENST00000556399 PXMP4Q9Y6I8 212 aa12.86□□□□□ -0.35
ARHGEF40-207ENST00000556399 A0A1W2PPE3 182 aa12.85□□□□□ -0.35
ARHGEF40-207ENST00000556399 EFNA2O43921 213 aa12.85□□□□□ -0.35
ARHGEF40-207ENST00000556399 FGF5P12034 268 aa12.85□□□□□ -0.35
ARHGEF40-207ENST00000556399 PTTG1IPP53801 180 aa12.85□□□□□ -0.35
ARHGEF40-207ENST00000556399 MRPS11P82912 194 aaKnown RBP12.85□□□□□ -0.35
ARHGEF40-207ENST00000556399 MST1LQ2TV78 715 aa12.85□□□□□ -0.35
ARHGEF40-207ENST00000556399 SMOC1Q9H4F8 434 aa12.85□□□□□ -0.35
ARHGEF40-207ENST00000556399 EP400Q96L91 3159 aa12.85□□□□□ -0.35
ARHGEF40-207ENST00000556399 TMEM250H0YL14 139 aa12.85□□□□□ -0.35
ARHGEF40-207ENST00000556399 ADH4P08319 380 aa12.85□□□□□ -0.35
ARHGEF40-207ENST00000556399 ZNF83P51522 516 aa12.85□□□□□ -0.35
ARHGEF40-207ENST00000556399 SDF2L1Q9HCN8 221 aa12.85□□□□□ -0.35
ARHGEF40-207ENST00000556399 TMEM210A6NLX4 147 aa12.85□□□□□ -0.35
ARHGEF40-207ENST00000556399 IGLV3-19P01714 112 aa12.85□□□□□ -0.35
ARHGEF40-207ENST00000556399 SLC25A5P05141 298 aaKnown RBP12.85□□□□□ -0.35
ARHGEF40-207ENST00000556399 NPY1RP25929 384 aa12.85□□□□□ -0.35
ARHGEF40-207ENST00000556399 CSRP2Q16527 193 aa12.85□□□□□ -0.35
ARHGEF40-207ENST00000556399 PKIBQ9C010 78 aa12.85□□□□□ -0.35
ARHGEF40-207ENST00000556399 BET1LQ9NYM9 111 aa12.85□□□□□ -0.35
ARHGEF40-207ENST00000556399 CTSSP25774 331 aa12.85□□□□□ -0.35
ARHGEF40-207ENST00000556399 FADS6Q8N9I5 356 aa12.85□□□□□ -0.35
ARHGEF40-207ENST00000556399 DIRC3C9JPN6 131 aa12.84□□□□□ -0.35
ARHGEF40-207ENST00000556399 COL10A1Q03692 680 aa12.84□□□□□ -0.35
ARHGEF40-207ENST00000556399 RTP5Q14D33 572 aa12.84□□□□□ -0.35
ARHGEF40-207ENST00000556399 OR4D5Q8NGN0 318 aa12.84□□□□□ -0.35
ARHGEF40-207ENST00000556399 ELOVL1Q9BW60 279 aa12.84□□□□□ -0.35
ARHGEF40-207ENST00000556399 ZNF552Q9H707 407 aaPredicted RBP12.84□□□□□ -0.35
ARHGEF40-207ENST00000556399 M0R2Z0 102 aa12.84□□□□□ -0.35
ARHGEF40-207ENST00000556399 LYL1P12980 280 aa12.84□□□□□ -0.35
ARHGEF40-207ENST00000556399 CEBPDP49716 269 aaPredicted RBP12.84□□□□□ -0.35
ARHGEF40-207ENST00000556399 LRRC75BQ2VPJ9 315 aa12.84□□□□□ -0.35
ARHGEF40-207ENST00000556399 DRAM1Q8N682 238 aa12.84□□□□□ -0.35
ARHGEF40-207ENST00000556399 TTTY12Q9BZ98 90 aa12.84□□□□□ -0.35
ARHGEF40-207ENST00000556399 AKIRIN1Q9H9L7 192 aaPredicted RBP12.84□□□□□ -0.35
ARHGEF40-207ENST00000556399 IL36RNQ9UBH0 155 aa12.84□□□□□ -0.35
ARHGEF40-207ENST00000556399 SERTM2A0A1B0GWG4 89 aa12.84□□□□□ -0.35
ARHGEF40-207ENST00000556399 ZNF891A8MT65 544 aaPredicted RBP12.84□□□□□ -0.35
ARHGEF40-207ENST00000556399 AGFG2O95081 481 aa12.84□□□□□ -0.35
ARHGEF40-207ENST00000556399 HIST1H1BP16401 226 aaKnown RBP12.84□□□□□ -0.35
ARHGEF40-207ENST00000556399 CYP2G1PQ6ZSU1 146 aa12.84□□□□□ -0.35
ARHGEF40-207ENST00000556399 TGIF2LXQ8IUE1 241 aa12.84□□□□□ -0.35
ARHGEF40-207ENST00000556399 LRTM2Q8N967 370 aa12.84□□□□□ -0.35
ARHGEF40-207ENST00000556399 PATE3B3GLJ2 98 aa12.84□□□□□ -0.35
ARHGEF40-207ENST00000556399 ZIC3O60481 467 aa12.84□□□□□ -0.35
ARHGEF40-207ENST00000556399 EGR1P18146 543 aa12.84□□□□□ -0.35
ARHGEF40-207ENST00000556399 RNF224P0DH78 156 aa12.83□□□□□ -0.36
ARHGEF40-207ENST00000556399 BLNKQ8WV28 456 aa12.83□□□□□ -0.36
ARHGEF40-207ENST00000556399 TMEM265A0A087WTH1 108 aa12.83□□□□□ -0.36
ARHGEF40-207ENST00000556399 IGKV1D-13A0A0B4J2D9 117 aa12.83□□□□□ -0.36
ARHGEF40-207ENST00000556399 CBY3A6NI87 242 aa12.83□□□□□ -0.36
ARHGEF40-207ENST00000556399 MPDU1O75352 247 aa12.83□□□□□ -0.36
ARHGEF40-207ENST00000556399 S1PR2O95136 353 aa12.83□□□□□ -0.36
ARHGEF40-207ENST00000556399 IGKV1-13P0DP09 117 aa12.83□□□□□ -0.36
ARHGEF40-207ENST00000556399 ADTRPQ96IZ2 230 aa12.83□□□□□ -0.36
ARHGEF40-207ENST00000556399 HEATR5AQ86XA9 2040 aa12.83□□□□□ -0.36
ARHGEF40-207ENST00000556399 HPRT1P00492 218 aa12.83□□□□□ -0.36
ARHGEF40-207ENST00000556399 NPVFQ9HCQ7 196 aa12.83□□□□□ -0.36
ARHGEF40-207ENST00000556399 C9JQL5 133 aa12.83□□□□□ -0.36
ARHGEF40-207ENST00000556399 CXCL1P09341 107 aa12.83□□□□□ -0.36
ARHGEF40-207ENST00000556399 BRS3P32247 399 aa12.83□□□□□ -0.36
ARHGEF40-207ENST00000556399 SLC35B1P78383 322 aa12.83□□□□□ -0.36
ARHGEF40-207ENST00000556399 TXNDC17Q9BRA2 123 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms