RNA–Protein interactions for RNA: ENST00000556210.1

CUX1-215, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-215ENST00000556210 KIAA1324LA8MWY0 1029 aaPredicted RBP12.62□□□□□ -0.39
CUX1-215ENST00000556210 MMP7P09237 267 aaPredicted RBP12.62□□□□□ -0.39
CUX1-215ENST00000556210 GFRA1P56159 465 aa12.62□□□□□ -0.39
CUX1-215ENST00000556210 COL10A1Q03692 680 aa12.62□□□□□ -0.39
CUX1-215ENST00000556210 SPNS3Q6ZMD2 512 aa12.62□□□□□ -0.39
CUX1-215ENST00000556210 PLPPR1Q8TBJ4 325 aa12.62□□□□□ -0.39
CUX1-215ENST00000556210 OR5P3Q8WZ94 311 aa12.62□□□□□ -0.39
CUX1-215ENST00000556210 RAB40CQ96S21 281 aa12.62□□□□□ -0.39
CUX1-215ENST00000556210 ATP5SQ99766 215 aa12.62□□□□□ -0.39
CUX1-215ENST00000556210 HIPK2Q9H2X6 1198 aa12.62□□□□□ -0.39
CUX1-215ENST00000556210 ELOA3CA0A087WX78 387 aaPredicted RBP12.61□□□□□ -0.39
CUX1-215ENST00000556210 XKRY2A2RUG3 117 aa12.61□□□□□ -0.39
CUX1-215ENST00000556210 CCL8P80075 99 aa12.61□□□□□ -0.39
CUX1-215ENST00000556210 PSG7Q13046 419 aa12.61□□□□□ -0.39
CUX1-215ENST00000556210 PYY3Q5JQD4 70 aa12.61□□□□□ -0.39
CUX1-215ENST00000556210 RNFT1Q5M7Z0 435 aa12.61□□□□□ -0.39
CUX1-215ENST00000556210 GFI1BQ5VTD9 330 aa12.61□□□□□ -0.39
CUX1-215ENST00000556210 ZNRF1Q8ND25 227 aa12.61□□□□□ -0.39
CUX1-215ENST00000556210 OR13D1Q8NGV5 346 aa12.61□□□□□ -0.39
CUX1-215ENST00000556210 SIRT7Q9NRC8 400 aa12.61□□□□□ -0.39
CUX1-215ENST00000556210 ARFGEF3Q5TH69 2177 aa12.61□□□□□ -0.39
CUX1-215ENST00000556210 CD55P08174 381 aa12.61□□□□□ -0.39
CUX1-215ENST00000556210 TMEM41BQ5BJD5 291 aa12.61□□□□□ -0.39
CUX1-215ENST00000556210 NCOR2Q9Y618 2525 aa12.61□□□□□ -0.39
CUX1-215ENST00000556210 FTH1P19P0C7X4 201 aa12.61□□□□□ -0.39
CUX1-215ENST00000556210 DDTP30046 118 aa12.61□□□□□ -0.39
CUX1-215ENST00000556210 PKIAP61925 76 aa12.61□□□□□ -0.39
CUX1-215ENST00000556210 CCL17Q92583 94 aa12.61□□□□□ -0.39
CUX1-215ENST00000556210 OR4C12Q96R67 309 aa12.61□□□□□ -0.39
CUX1-215ENST00000556210 S1PR3Q99500 378 aa12.61□□□□□ -0.39
CUX1-215ENST00000556210 ZNF737O75373 536 aa12.6□□□□□ -0.39
CUX1-215ENST00000556210 RND1Q92730 232 aa12.6□□□□□ -0.39
CUX1-215ENST00000556210 SMDT1Q9H4I9 107 aa12.6□□□□□ -0.39
CUX1-215ENST00000556210 ZDHHC8Q9ULC8 765 aa12.6□□□□□ -0.39
CUX1-215ENST00000556210 TRAV24A0A0B4J272 114 aa12.6□□□□□ -0.39
CUX1-215ENST00000556210 PIGBOS1A0A0B4J2F0 54 aa12.6□□□□□ -0.39
CUX1-215ENST00000556210 CACNA1AO00555 2505 aa12.6□□□□□ -0.39
CUX1-215ENST00000556210 TGOLN2O43493 480 aa12.6□□□□□ -0.39
CUX1-215ENST00000556210 KHDC3LQ587J8 217 aa12.6□□□□□ -0.39
CUX1-215ENST00000556210 ZCCHC24Q8N2G6 241 aaKnown RBP12.6□□□□□ -0.39
CUX1-215ENST00000556210 ABHD5Q8WTS1 349 aa12.6□□□□□ -0.39
CUX1-215ENST00000556210 ZDHHC16Q969W1 377 aa12.6□□□□□ -0.39
CUX1-215ENST00000556210 GALNT14Q96FL9 552 aa12.6□□□□□ -0.39
CUX1-215ENST00000556210 RPRMQ9NS64 109 aa12.6□□□□□ -0.39
CUX1-215ENST00000556210 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.6□□□□□ -0.39
CUX1-215ENST00000556210 RALYQ9UKM9 306 aaKnown RBP12.6□□□□□ -0.39
CUX1-215ENST00000556210 PITX3O75364 302 aa12.6□□□□□ -0.39
CUX1-215ENST00000556210 REG1BP48304 166 aa12.6□□□□□ -0.39
CUX1-215ENST00000556210 KCNIP4Q6PIL6 250 aa12.6□□□□□ -0.39
CUX1-215ENST00000556210 HEPN1Q6WQI6 88 aa12.6□□□□□ -0.39
CUX1-215ENST00000556210 DRAM1Q8N682 238 aa12.6□□□□□ -0.39
CUX1-215ENST00000556210 SPRR3Q9UBC9 169 aa12.6□□□□□ -0.39
CUX1-215ENST00000556210 DVL1O14640 695 aa12.59□□□□□ -0.39
CUX1-215ENST00000556210 LYL1P12980 280 aa12.59□□□□□ -0.39
CUX1-215ENST00000556210 RPS2P15880 293 aaKnown RBP12.59□□□□□ -0.39
CUX1-215ENST00000556210 KITLGP21583 273 aa12.59□□□□□ -0.39
CUX1-215ENST00000556210 TAS2R30P59541 319 aa12.59□□□□□ -0.39
CUX1-215ENST00000556210 WDR25Q64LD2 544 aaPredicted RBP12.59□□□□□ -0.39
CUX1-215ENST00000556210 DDA1Q9BW61 102 aa12.59□□□□□ -0.39
CUX1-215ENST00000556210 SRP19P09132 144 aaKnown RBP12.59□□□□□ -0.39
CUX1-215ENST00000556210 TNFSF4P23510 183 aa12.59□□□□□ -0.39
CUX1-215ENST00000556210 IL24Q13007 206 aa12.59□□□□□ -0.39
CUX1-215ENST00000556210 PMS2P11Q13670 270 aa12.59□□□□□ -0.39
CUX1-215ENST00000556210 OR10A7Q8NGE5 316 aa12.59□□□□□ -0.39
CUX1-215ENST00000556210 OR10G4Q8NGN3 311 aa12.59□□□□□ -0.39
CUX1-215ENST00000556210 OR10G9Q8NGN4 311 aa12.59□□□□□ -0.39
CUX1-215ENST00000556210 OR10G7Q8NGN6 311 aa12.59□□□□□ -0.39
CUX1-215ENST00000556210 DTD1Q8TEA8 209 aa12.59□□□□□ -0.39
CUX1-215ENST00000556210 OR51I2Q9H344 312 aa12.59□□□□□ -0.39
CUX1-215ENST00000556210 ZG16O60844 167 aa12.59□□□□□ -0.39
CUX1-215ENST00000556210 S1PR2O95136 353 aa12.59□□□□□ -0.39
CUX1-215ENST00000556210 CD59P13987 128 aa12.59□□□□□ -0.39
CUX1-215ENST00000556210 LYPD6Q86Y78 171 aa12.59□□□□□ -0.39
CUX1-215ENST00000556210 TMEM18Q96B42 140 aa12.59□□□□□ -0.39
CUX1-215ENST00000556210 GLRX2Q9NS18 164 aa12.59□□□□□ -0.39
CUX1-215ENST00000556210 RRP8O43159 456 aaKnown RBP12.59□□□□□ -0.39
CUX1-215ENST00000556210 HSPB1P04792 205 aaKnown RBP12.59□□□□□ -0.39
CUX1-215ENST00000556210 CXCL1P09341 107 aa12.59□□□□□ -0.39
CUX1-215ENST00000556210 FOXF2Q12947 444 aa12.59□□□□□ -0.39
CUX1-215ENST00000556210 Q8IYB0 196 aa12.59□□□□□ -0.39
CUX1-215ENST00000556210 LYRM2Q9NU23 88 aaPredicted RBP12.59□□□□□ -0.39
CUX1-215ENST00000556210 TMPRSS2O15393 492 aa12.58□□□□□ -0.4
CUX1-215ENST00000556210 HIST1H2BKO60814 126 aa12.58□□□□□ -0.4
CUX1-215ENST00000556210 HIST1H2BJP06899 126 aa12.58□□□□□ -0.4
CUX1-215ENST00000556210 IGHV1-2P23083 117 aa12.58□□□□□ -0.4
CUX1-215ENST00000556210 HIST1H2BOP23527 126 aa12.58□□□□□ -0.4
CUX1-215ENST00000556210 HIST1H2BBP33778 126 aa12.58□□□□□ -0.4
CUX1-215ENST00000556210 HIST1H2BDP58876 126 aa12.58□□□□□ -0.4
CUX1-215ENST00000556210 HIST1H2BCP62807 126 aa12.58□□□□□ -0.4
CUX1-215ENST00000556210 HIST2H2BEQ16778 126 aa12.58□□□□□ -0.4
CUX1-215ENST00000556210 TMEM241Q24JQ0 296 aa12.58□□□□□ -0.4
CUX1-215ENST00000556210 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.58□□□□□ -0.4
CUX1-215ENST00000556210 HIST1H2BHQ93079 126 aa12.58□□□□□ -0.4
CUX1-215ENST00000556210 GMPPAQ96IJ6 420 aaPredicted RBP12.58□□□□□ -0.4
CUX1-215ENST00000556210 HIST1H2BNQ99877 126 aa12.58□□□□□ -0.4
CUX1-215ENST00000556210 HIST1H2BMQ99879 126 aa12.58□□□□□ -0.4
CUX1-215ENST00000556210 IL18BPO95998 194 aa12.58□□□□□ -0.4
CUX1-215ENST00000556210 GALR1P47211 349 aa12.58□□□□□ -0.4
CUX1-215ENST00000556210 PNRC1Q12796 327 aaPredicted RBP12.58□□□□□ -0.4
CUX1-215ENST00000556210 MRPL30Q8TCC3 161 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms