RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 HCP5Q6MZN7 132 aa8.98□□□□□ -0.97
TMEM260-208ENST00000555905 SLC25A42Q86VD7 318 aa8.98□□□□□ -0.97
TMEM260-208ENST00000555905 SGPP2Q8IWX5 399 aa8.98□□□□□ -0.97
TMEM260-208ENST00000555905 PDZD9Q8IXQ8 264 aa8.98□□□□□ -0.97
TMEM260-208ENST00000555905 ADAD2Q8NCV1 583 aaKnown RBP8.98□□□□□ -0.97
TMEM260-208ENST00000555905 RTN4IP1Q8WWV3 396 aaPredicted RBP8.98□□□□□ -0.97
TMEM260-208ENST00000555905 ALX4Q9H161 411 aaPredicted RBP8.98□□□□□ -0.97
TMEM260-208ENST00000555905 SDHAF2Q9NX18 166 aa8.98□□□□□ -0.97
TMEM260-208ENST00000555905 CSMD1Q96PZ7 3565 aa8.98□□□□□ -0.97
TMEM260-208ENST00000555905 FLNBO75369 2602 aaKnown RBP8.98□□□□□ -0.97
TMEM260-208ENST00000555905 CREBBPQ92793 2442 aa8.97□□□□□ -0.97
TMEM260-208ENST00000555905 ODF3BA8MYP8 253 aa8.97□□□□□ -0.97
TMEM260-208ENST00000555905 LEUTXA8MZ59 168 aa8.97□□□□□ -0.97
TMEM260-208ENST00000555905 BUB1B-PAK6H3BSN5 160 aa8.97□□□□□ -0.97
TMEM260-208ENST00000555905 M0R1X1 148 aa8.97□□□□□ -0.97
TMEM260-208ENST00000555905 TNFSF12O43508 249 aa8.97□□□□□ -0.97
TMEM260-208ENST00000555905 PRAF2O60831 178 aa8.97□□□□□ -0.97
TMEM260-208ENST00000555905 PGLYRP1O75594 196 aaPredicted RBP8.97□□□□□ -0.97
TMEM260-208ENST00000555905 IGLV2-14P01704 120 aa8.97□□□□□ -0.97
TMEM260-208ENST00000555905 VAMP1P23763 118 aa8.97□□□□□ -0.97
TMEM260-208ENST00000555905 HTR1DP28221 377 aa8.97□□□□□ -0.97
TMEM260-208ENST00000555905 MECP2P51608 486 aaKnown RBP8.97□□□□□ -0.97
TMEM260-208ENST00000555905 CATR1Q13166 79 aa8.97□□□□□ -0.97
TMEM260-208ENST00000555905 MIDNQ504T8 468 aa8.97□□□□□ -0.97
TMEM260-208ENST00000555905 RPL39P5Q59GN2 51 aa8.97□□□□□ -0.97
TMEM260-208ENST00000555905 GPR157Q5UAW9 335 aa8.97□□□□□ -0.97
TMEM260-208ENST00000555905 FAM71F2Q6NXP2 309 aa8.97□□□□□ -0.97
TMEM260-208ENST00000555905 ZNF66Q6ZN08 573 aa8.97□□□□□ -0.97
TMEM260-208ENST00000555905 ZNF833PQ6ZTB9 187 aa8.97□□□□□ -0.97
TMEM260-208ENST00000555905 ODF3L1Q8IXM7 274 aa8.97□□□□□ -0.97
TMEM260-208ENST00000555905 OR4P4Q8NGL7 312 aa8.97□□□□□ -0.97
TMEM260-208ENST00000555905 ADTRPQ96IZ2 230 aa8.97□□□□□ -0.97
TMEM260-208ENST00000555905 HSD17B10Q99714 261 aaKnown RBP8.97□□□□□ -0.97
TMEM260-208ENST00000555905 BEX2Q9BXY8 128 aa8.97□□□□□ -0.97
TMEM260-208ENST00000555905 BEX1Q9HBH7 125 aa8.97□□□□□ -0.97
TMEM260-208ENST00000555905 GPN1Q9HCN4 374 aaPredicted RBP8.97□□□□□ -0.97
TMEM260-208ENST00000555905 ZNRD1Q9P1U0 126 aa8.97□□□□□ -0.97
TMEM260-208ENST00000555905 KCNIP3Q9Y2W7 256 aa8.97□□□□□ -0.97
TMEM260-208ENST00000555905 AKAP9Q99996 3911 aa8.97□□□□□ -0.97
TMEM260-208ENST00000555905 NOTCH2Q04721 2471 aa8.96□□□□□ -0.97
TMEM260-208ENST00000555905 IGHV1-69DA0A0B4J2H0 117 aa8.96□□□□□ -0.98
TMEM260-208ENST00000555905 CENPVL3A0A0U1RRI6 287 aa8.96□□□□□ -0.98
TMEM260-208ENST00000555905 A0A1W2PRD5 423 aa8.96□□□□□ -0.98
TMEM260-208ENST00000555905 A0A1W2PRF3 423 aa8.96□□□□□ -0.98
TMEM260-208ENST00000555905 A0A1W2PRM7 423 aa8.96□□□□□ -0.98
TMEM260-208ENST00000555905 CRYM-AS1A6NIL9 109 aa8.96□□□□□ -0.98
TMEM260-208ENST00000555905 NPFFO15130 113 aa8.96□□□□□ -0.98
TMEM260-208ENST00000555905 B3GALNT1O75752 331 aa8.96□□□□□ -0.98
TMEM260-208ENST00000555905 IFNA2P01563 188 aa8.96□□□□□ -0.98
TMEM260-208ENST00000555905 IGHV1-69P01742 117 aa8.96□□□□□ -0.98
TMEM260-208ENST00000555905 IL5P05113 134 aa8.96□□□□□ -0.98
TMEM260-208ENST00000555905 OR4E1P0C645 316 aa8.96□□□□□ -0.98
TMEM260-208ENST00000555905 VSIG10L2P0DP72 767 aa8.96□□□□□ -0.98
TMEM260-208ENST00000555905 ANXA3P12429 323 aa8.96□□□□□ -0.98
TMEM260-208ENST00000555905 EPHA1P21709 976 aa8.96□□□□□ -0.98
TMEM260-208ENST00000555905 ZNF137PP52743 207 aa8.96□□□□□ -0.98
TMEM260-208ENST00000555905 TATDN3Q17R31 274 aa8.96□□□□□ -0.98
TMEM260-208ENST00000555905 MINOS1Q5TGZ0 78 aa8.96□□□□□ -0.98
TMEM260-208ENST00000555905 KCTD9Q7L273 389 aa8.96□□□□□ -0.98
TMEM260-208ENST00000555905 TBC1D26Q86UD7 250 aa8.96□□□□□ -0.98
TMEM260-208ENST00000555905 TGIF2LXQ8IUE1 241 aa8.96□□□□□ -0.98
TMEM260-208ENST00000555905 TEX29Q8N6K0 151 aa8.96□□□□□ -0.98
TMEM260-208ENST00000555905 OR51H1Q8NH63 302 aa8.96□□□□□ -0.98
TMEM260-208ENST00000555905 TCTEX1D2Q8WW35 142 aa8.96□□□□□ -0.98
TMEM260-208ENST00000555905 TMEM230Q96A57 120 aa8.96□□□□□ -0.98
TMEM260-208ENST00000555905 RPEQ96AT9 228 aa8.96□□□□□ -0.98
TMEM260-208ENST00000555905 C18orf12Q96KH6 178 aa8.96□□□□□ -0.98
TMEM260-208ENST00000555905 NAA60Q9H7X0 242 aa8.96□□□□□ -0.98
TMEM260-208ENST00000555905 LIN7CQ9NUP9 197 aaKnown RBP8.96□□□□□ -0.98
TMEM260-208ENST00000555905 DPM3Q9P2X0 92 aa8.96□□□□□ -0.98
TMEM260-208ENST00000555905 TBL2Q9Y4P3 447 aaKnown RBP8.96□□□□□ -0.98
TMEM260-208ENST00000555905 MINOS1-NBL1R4GNA1 71 aa8.96□□□□□ -0.98
TMEM260-208ENST00000555905 MYO9AB2RTY4 2548 aa8.96□□□□□ -0.98
TMEM260-208ENST00000555905 FLNAP21333 2647 aaKnown RBP8.95□□□□□ -0.98
TMEM260-208ENST00000555905 TRAV40A0A0B4J280 105 aa8.95□□□□□ -0.98
TMEM260-208ENST00000555905 C3orf85A0A1B0GTC6 90 aa8.95□□□□□ -0.98
TMEM260-208ENST00000555905 LY6LH3BQJ8 138 aa8.95□□□□□ -0.98
TMEM260-208ENST00000555905 TXNL1O43396 289 aa8.95□□□□□ -0.98
TMEM260-208ENST00000555905 CD5LO43866 347 aa8.95□□□□□ -0.98
TMEM260-208ENST00000555905 HLA-AP01891 365 aaKnown RBP8.95□□□□□ -0.98
TMEM260-208ENST00000555905 GAPDHP04406 335 aaKnown RBP8.95□□□□□ -0.98
TMEM260-208ENST00000555905 F2RP25116 425 aa8.95□□□□□ -0.98
TMEM260-208ENST00000555905 THBS3P49746 956 aa8.95□□□□□ -0.98
TMEM260-208ENST00000555905 DHODHQ02127 395 aa8.95□□□□□ -0.98
TMEM260-208ENST00000555905 PPP1R1AQ13522 171 aa8.95□□□□□ -0.98
TMEM260-208ENST00000555905 EIF4EBP1Q13541 118 aaPredicted RBP8.95□□□□□ -0.98
TMEM260-208ENST00000555905 TPTE2P1Q5T6R2 138 aa8.95□□□□□ -0.98
TMEM260-208ENST00000555905 CCDC144NLQ6NUI1 221 aa8.95□□□□□ -0.98
TMEM260-208ENST00000555905 SPNS3Q6ZMD2 512 aa8.95□□□□□ -0.98
TMEM260-208ENST00000555905 GLDNQ6ZMI3 551 aaPredicted RBP8.95□□□□□ -0.98
TMEM260-208ENST00000555905 Q6ZNX1 250 aa8.95□□□□□ -0.98
TMEM260-208ENST00000555905 LYG2Q86SG7 212 aa8.95□□□□□ -0.98
TMEM260-208ENST00000555905 DRAXINQ8NBI3 349 aaPredicted RBP8.95□□□□□ -0.98
TMEM260-208ENST00000555905 CAPSLQ8WWF8 208 aa8.95□□□□□ -0.98
TMEM260-208ENST00000555905 ST6GALNAC6Q969X2 333 aa8.95□□□□□ -0.98
TMEM260-208ENST00000555905 C5orf30Q96GV9 206 aa8.95□□□□□ -0.98
TMEM260-208ENST00000555905 GPHA2Q96T91 129 aa8.95□□□□□ -0.98
TMEM260-208ENST00000555905 ZNF251Q9BRH9 671 aa8.95□□□□□ -0.98
TMEM260-208ENST00000555905 PRELID3BQ9Y3B1 194 aa8.95□□□□□ -0.98
TMEM260-208ENST00000555905 IGHV3OR16-10A0A075B7F0 116 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms