RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 NHEJ1Q9H9Q4 299 aaPredicted RBP2.36□□□□□ -2.03
SRP54-209ENST00000555746 WFDC1Q9HC57 220 aa2.36□□□□□ -2.03
SRP54-209ENST00000555746 FGF20Q9NP95 211 aaPredicted RBP2.36□□□□□ -2.03
SRP54-209ENST00000555746 FAM206AQ9NX38 181 aa2.36□□□□□ -2.03
SRP54-209ENST00000555746 B3GNT2Q9NY97 397 aa2.36□□□□□ -2.03
SRP54-209ENST00000555746 SLC25A37Q9NYZ2 338 aa2.36□□□□□ -2.03
SRP54-209ENST00000555746 IL17CQ9P0M4 197 aa2.36□□□□□ -2.03
SRP54-209ENST00000555746 VPS29Q9UBQ0 182 aa2.36□□□□□ -2.03
SRP54-209ENST00000555746 OR12D3Q9UGF7 316 aa2.36□□□□□ -2.03
SRP54-209ENST00000555746 LGALS13Q9UHV8 139 aa2.36□□□□□ -2.03
SRP54-209ENST00000555746 NEU3Q9UQ49 428 aa2.36□□□□□ -2.03
SRP54-209ENST00000555746 BAIAP2Q9UQB8 552 aa2.36□□□□□ -2.03
SRP54-209ENST00000555746 LSM5Q9Y4Y9 91 aaKnown RBP2.36□□□□□ -2.03
SRP54-209ENST00000555746 SNX10Q9Y5X0 201 aa2.36□□□□□ -2.03
SRP54-209ENST00000555746 NCOA6Q14686 2063 aaPredicted RBP2.36□□□□□ -2.03
SRP54-209ENST00000555746 UBR4Q5T4S7 5183 aa2.36□□□□□ -2.03
SRP54-209ENST00000555746 IGHV1OR15-1A0A075B7D0 117 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 IGHV7-81A0A0B4J1V7 117 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 TSPAN11A1L157 253 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 ZNF705EA8MWA4 302 aaPredicted RBP2.35□□□□□ -2.03
SRP54-209ENST00000555746 ANKRD65E5RJM6 399 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 H3BMQ9 156 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 K7EM74 188 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 FAAHO00519 579 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 MRASO14807 208 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 FOXH1O75593 365 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 CA1P00915 261 aaPredicted RBP2.35□□□□□ -2.03
SRP54-209ENST00000555746 IGF2P01344 180 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 IFNA17P01571 189 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 CATP04040 527 aaKnown RBP2.35□□□□□ -2.03
SRP54-209ENST00000555746 CSF3P09919 207 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 OR8U8P0C7N1 319 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 ZNF17P17021 662 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 GPX2P18283 190 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 GABRG2P18507 467 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 PSMB1P20618 241 aaKnown RBP2.35□□□□□ -2.03
SRP54-209ENST00000555746 ZBTB25P24278 435 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 HTR1DP28221 377 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 DDTP30046 118 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 GRPRP30550 384 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 PYCR1P32322 319 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 IFNGR2P38484 337 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 GLP1RP43220 463 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 DIO3P55073 304 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 BIDP55957 195 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 TPI1P60174 286 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 NCALDP61601 193 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 PKIAP61925 76 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 RRAS2P62070 204 aaPredicted RBP2.35□□□□□ -2.03
SRP54-209ENST00000555746 TBPL1P62380 186 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 RAP1AP62834 184 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 RPL31P62899 125 aaKnown RBP2.35□□□□□ -2.03
SRP54-209ENST00000555746 PAFAH1B2P68402 229 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 ARG2P78540 354 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 EGFEM1PQ0D2K5 195 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 RSU1Q15404 277 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 SNRNP35Q16560 246 aaKnown RBP2.35□□□□□ -2.03
SRP54-209ENST00000555746 TAF9Q16594 264 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 CPTPQ5TA50 214 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 XKRXQ6PP77 449 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 TOMM20LQ6UXN7 152 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 C16orf47Q6ZP98 133 aaPredicted RBP2.35□□□□□ -2.03
SRP54-209ENST00000555746 TMPPEQ6ZT21 453 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 ZNF767PQ75MW2 155 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 FAM19A5Q7Z5A7 132 aaPredicted RBP2.35□□□□□ -2.03
SRP54-209ENST00000555746 RAB43Q86YS6 212 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 CPNE9Q8IYJ1 553 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 PRR22Q8IZ63 422 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 MS4A15Q8N5U1 240 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 KIR3DL3Q8N743 410 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 C14orf178Q8N769 122 aaPredicted RBP2.35□□□□□ -2.03
SRP54-209ENST00000555746 TPRX1Q8N7U7 411 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 GDPD1Q8N9F7 314 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 ST6GALNAC3Q8NDV1 305 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 DUSP18Q8NEJ0 188 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 GPR32P1Q8NGA4 272 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 OR8U1Q8NH10 309 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 OR5J2Q8NH18 312 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 OR4C6Q8NH72 309 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 OR4S2Q8NH73 311 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 HAVCR2Q8TDQ0 301 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 DOK4Q8TEW6 326 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 NAT14Q8WUY8 206 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 SFT2D1Q8WV19 159 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 IL22RA2Q969J5 263 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 RCN3Q96D15 328 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 NARS2Q96I59 477 aaKnown RBP2.35□□□□□ -2.03
SRP54-209ENST00000555746 ADTRPQ96IZ2 230 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 NIPSNAP3BQ9BS92 247 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 RIOK2Q9BVS4 552 aaKnown RBP2.35□□□□□ -2.03
SRP54-209ENST00000555746 LRTM1Q9HBL6 345 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 ENY2Q9NPA8 101 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 ACP6Q9NPH0 428 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 HRASLS2Q9NWW9 162 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 SPANXCQ9NY87 97 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 SIGLEC8Q9NYZ4 499 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 CALML5Q9NZT1 146 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 OPTCQ9UBM4 332 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 SS18L2Q9UHA2 77 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 GNPTGQ9UJJ9 305 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms