RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 SPPL2BQ8TCT7 592 aa2.79□□□□□ -1.96
VRK1-205ENST00000555402 TMBIM1Q969X1 311 aa2.79□□□□□ -1.96
VRK1-205ENST00000555402 TMEM109Q9BVC6 243 aa2.79□□□□□ -1.96
VRK1-205ENST00000555402 ABCG5Q9H222 651 aa2.79□□□□□ -1.96
VRK1-205ENST00000555402 PARVAQ9NVD7 372 aa2.79□□□□□ -1.96
VRK1-205ENST00000555402 ZNF391Q9UJN7 358 aa2.79□□□□□ -1.96
VRK1-205ENST00000555402 DKKL1Q9UK85 242 aa2.79□□□□□ -1.96
VRK1-205ENST00000555402 FBXO5Q9UKT4 447 aa2.79□□□□□ -1.96
VRK1-205ENST00000555402 PEG3Q9GZU2 1588 aa2.78□□□□□ -1.96
VRK1-205ENST00000555402 SEC16AO15027 2179 aa2.78□□□□□ -1.96
VRK1-205ENST00000555402 ATRNO75882 1429 aa2.78□□□□□ -1.96
VRK1-205ENST00000555402 NCOA1Q15788 1441 aa2.78□□□□□ -1.96
VRK1-205ENST00000555402 SSH2Q76I76 1423 aa2.78□□□□□ -1.96
VRK1-205ENST00000555402 LOC105371267A0A1B0GV96 52 aa2.78□□□□□ -1.96
VRK1-205ENST00000555402 C4orf51C9J302 202 aa2.78□□□□□ -1.96
VRK1-205ENST00000555402 C15orf65H3BRN8 121 aa2.78□□□□□ -1.96
VRK1-205ENST00000555402 CHP2O43745 196 aa2.78□□□□□ -1.96
VRK1-205ENST00000555402 GPR75O95800 540 aa2.78□□□□□ -1.96
VRK1-205ENST00000555402 IGLV6-57P01721 117 aa2.78□□□□□ -1.96
VRK1-205ENST00000555402 CXCL2P19875 107 aa2.78□□□□□ -1.96
VRK1-205ENST00000555402 AGTR1P30556 359 aa2.78□□□□□ -1.96
VRK1-205ENST00000555402 MP68P56378 58 aa2.78□□□□□ -1.96
VRK1-205ENST00000555402 H2BFSP57053 126 aa2.78□□□□□ -1.96
VRK1-205ENST00000555402 IFITM2Q01629 132 aa2.78□□□□□ -1.96
VRK1-205ENST00000555402 ZNF141Q15928 474 aa2.78□□□□□ -1.96
VRK1-205ENST00000555402 SCGB1D4Q6XE38 83 aa2.78□□□□□ -1.96
VRK1-205ENST00000555402 Q6ZQT7 251 aa2.78□□□□□ -1.96
VRK1-205ENST00000555402 FAM19A3Q7Z5A8 133 aa2.78□□□□□ -1.96
VRK1-205ENST00000555402 FER1L6-AS1Q8NA97 138 aa2.78□□□□□ -1.96
VRK1-205ENST00000555402 BPIFB6Q8NFQ5 453 aa2.78□□□□□ -1.96
VRK1-205ENST00000555402 TMA16Q96EY4 203 aaKnown RBP2.78□□□□□ -1.96
VRK1-205ENST00000555402 PYURFQ96I23 114 aa2.78□□□□□ -1.96
VRK1-205ENST00000555402 PRSS27Q9BQR3 290 aa2.78□□□□□ -1.96
VRK1-205ENST00000555402 TSSK6Q9BXA6 273 aa2.78□□□□□ -1.96
VRK1-205ENST00000555402 R4GN34 69 aa2.78□□□□□ -1.96
VRK1-205ENST00000555402 OR5H14A6NHG9 310 aa2.77□□□□□ -1.97
VRK1-205ENST00000555402 D6RAR5 112 aa2.77□□□□□ -1.97
VRK1-205ENST00000555402 H3BMM0 161 aa2.77□□□□□ -1.97
VRK1-205ENST00000555402 K7EQS6 105 aa2.77□□□□□ -1.97
VRK1-205ENST00000555402 M0QYV0 167 aa2.77□□□□□ -1.97
VRK1-205ENST00000555402 ARL6IP5O75915 188 aa2.77□□□□□ -1.97
VRK1-205ENST00000555402 EPPINO95925 133 aa2.77□□□□□ -1.97
VRK1-205ENST00000555402 PDYNP01213 254 aa2.77□□□□□ -1.97
VRK1-205ENST00000555402 IGHV3-53P01767 116 aa2.77□□□□□ -1.97
VRK1-205ENST00000555402 GUSBP08236 651 aa2.77□□□□□ -1.97
VRK1-205ENST00000555402 CST2P09228 141 aa2.77□□□□□ -1.97
VRK1-205ENST00000555402 HRES1P13985 223 aa2.77□□□□□ -1.97
VRK1-205ENST00000555402 REG1BP48304 166 aa2.77□□□□□ -1.97
VRK1-205ENST00000555402 EDDM3AQ14507 147 aa2.77□□□□□ -1.97
VRK1-205ENST00000555402 IHHQ14623 411 aa2.77□□□□□ -1.97
VRK1-205ENST00000555402 POU6F1Q14863 301 aa2.77□□□□□ -1.97
VRK1-205ENST00000555402 PAFAH1B3Q15102 231 aaKnown RBP2.77□□□□□ -1.97
VRK1-205ENST00000555402 LIN52Q52LA3 116 aa2.77□□□□□ -1.97
VRK1-205ENST00000555402 PYDC2Q56P42 97 aa2.77□□□□□ -1.97
VRK1-205ENST00000555402 TMEM97Q5BJF2 176 aa2.77□□□□□ -1.97
VRK1-205ENST00000555402 HIST2H3PS2Q5TEC6 136 aa2.77□□□□□ -1.97
VRK1-205ENST00000555402 TRIQKQ629K1 86 aa2.77□□□□□ -1.97
VRK1-205ENST00000555402 AMMECR1LQ6DCA0 310 aa2.77□□□□□ -1.97
VRK1-205ENST00000555402 SFXN4Q6P4A7 337 aa2.77□□□□□ -1.97
VRK1-205ENST00000555402 TCF23Q7RTU1 214 aa2.77□□□□□ -1.97
VRK1-205ENST00000555402 C3orf22Q8N5N4 141 aa2.77□□□□□ -1.97
VRK1-205ENST00000555402 NATD1Q8N6N6 113 aa2.77□□□□□ -1.97
VRK1-205ENST00000555402 OR1L8Q8NGR8 309 aa2.77□□□□□ -1.97
VRK1-205ENST00000555402 OR10D3Q8NH80 312 aa2.77□□□□□ -1.97
VRK1-205ENST00000555402 OR4A5Q8NH83 315 aa2.77□□□□□ -1.97
VRK1-205ENST00000555402 OR2V1Q8NHB1 315 aa2.77□□□□□ -1.97
VRK1-205ENST00000555402 UBE2WQ96B02 151 aa2.77□□□□□ -1.97
VRK1-205ENST00000555402 NIPSNAP1Q9BPW8 284 aa2.77□□□□□ -1.97
VRK1-205ENST00000555402 KCNIP2Q9NS61 270 aa2.77□□□□□ -1.97
VRK1-205ENST00000555402 GLS2Q9UI32 602 aa2.77□□□□□ -1.97
VRK1-205ENST00000555402 TEX50A0A1B0GTY4 177 aa2.76□□□□□ -1.97
VRK1-205ENST00000555402 A0A1B0GV72 72 aa2.76□□□□□ -1.97
VRK1-205ENST00000555402 KLRC4O43908 158 aa2.76□□□□□ -1.97
VRK1-205ENST00000555402 HAND1O96004 215 aa2.76□□□□□ -1.97
VRK1-205ENST00000555402 GYPCP04921 128 aa2.76□□□□□ -1.97
VRK1-205ENST00000555402 REG1AP05451 166 aa2.76□□□□□ -1.97
VRK1-205ENST00000555402 ATP5G1P05496 136 aa2.76□□□□□ -1.97
VRK1-205ENST00000555402 IGKV4-1P06312 121 aa2.76□□□□□ -1.97
VRK1-205ENST00000555402 IL3P08700 152 aa2.76□□□□□ -1.97
VRK1-205ENST00000555402 CGB3P0DN86 165 aa2.76□□□□□ -1.97
VRK1-205ENST00000555402 CGB7P0DN87 165 aa2.76□□□□□ -1.97
VRK1-205ENST00000555402 ZNF708P17019 499 aa2.76□□□□□ -1.97
VRK1-205ENST00000555402 CDK9P50750 372 aaKnown RBP2.76□□□□□ -1.97
VRK1-205ENST00000555402 C1QTNF8P60827 252 aa2.76□□□□□ -1.97
VRK1-205ENST00000555402 RAB5BP61020 215 aa2.76□□□□□ -1.97
VRK1-205ENST00000555402 RPRMLQ8N4K4 120 aa2.76□□□□□ -1.97
VRK1-205ENST00000555402 TMEM86BQ8N661 226 aa2.76□□□□□ -1.97
VRK1-205ENST00000555402 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.76□□□□□ -1.97
VRK1-205ENST00000555402 OR2D3Q8NGH3 330 aa2.76□□□□□ -1.97
VRK1-205ENST00000555402 APOBEC3DQ96AK3 386 aaPredicted RBP2.76□□□□□ -1.97
VRK1-205ENST00000555402 TVP23CQ96ET8 276 aa2.76□□□□□ -1.97
VRK1-205ENST00000555402 CMSS1Q9BQ75 279 aaKnown RBP2.76□□□□□ -1.97
VRK1-205ENST00000555402 MED18Q9BUE0 208 aa2.76□□□□□ -1.97
VRK1-205ENST00000555402 VPREB3Q9UKI3 123 aa2.76□□□□□ -1.97
VRK1-205ENST00000555402 TIMM22Q9Y584 194 aa2.76□□□□□ -1.97
VRK1-205ENST00000555402 GRIN2BQ13224 1484 aa2.76□□□□□ -1.97
VRK1-205ENST00000555402 DISC1C4P0D8 188 aa2.75□□□□□ -1.97
VRK1-205ENST00000555402 ZNF878C9JN71 531 aa2.75□□□□□ -1.97
VRK1-205ENST00000555402 TMEM250H0YL14 139 aa2.75□□□□□ -1.97
VRK1-205ENST00000555402 COPEO14579 308 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms