RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 PHF21AQ96BD5 680 aa9.79□□□□□ -0.84
SYNE2-214ENST00000554928 PIPOXQ9P0Z9 390 aa9.79□□□□□ -0.84
SYNE2-214ENST00000554928 LINC00527Q9UJ94 153 aa9.79□□□□□ -0.84
SYNE2-214ENST00000554928 NCBP2LA6PVI3 153 aaKnown RBP9.78□□□□□ -0.84
SYNE2-214ENST00000554928 H0YJW9 148 aa9.78□□□□□ -0.84
SYNE2-214ENST00000554928 GPR12P47775 334 aa9.78□□□□□ -0.84
SYNE2-214ENST00000554928 PITPNAQ00169 270 aa9.78□□□□□ -0.84
SYNE2-214ENST00000554928 TMEM69Q5SWH9 247 aa9.78□□□□□ -0.84
SYNE2-214ENST00000554928 HOGA1Q86XE5 327 aa9.78□□□□□ -0.84
SYNE2-214ENST00000554928 EDARADDQ8WWZ3 215 aa9.78□□□□□ -0.84
SYNE2-214ENST00000554928 S100A16Q96FQ6 103 aaKnown RBP9.78□□□□□ -0.84
SYNE2-214ENST00000554928 AKR1E2Q96JD6 320 aa9.78□□□□□ -0.84
SYNE2-214ENST00000554928 NOL4LQ96MY1 436 aaPredicted RBP9.78□□□□□ -0.84
SYNE2-214ENST00000554928 S1PR3Q99500 378 aa9.78□□□□□ -0.84
SYNE2-214ENST00000554928 HSPB9Q9BQS6 159 aa9.78□□□□□ -0.84
SYNE2-214ENST00000554928 GINS4Q9BRT9 223 aa9.78□□□□□ -0.84
SYNE2-214ENST00000554928 OR2D2Q9H210 308 aa9.78□□□□□ -0.84
SYNE2-214ENST00000554928 MIXL1Q9H2W2 232 aa9.78□□□□□ -0.84
SYNE2-214ENST00000554928 SDHAF2Q9NX18 166 aa9.78□□□□□ -0.84
SYNE2-214ENST00000554928 ANXA10Q9UJ72 324 aa9.78□□□□□ -0.84
SYNE2-214ENST00000554928 CEPT1Q9Y6K0 416 aa9.78□□□□□ -0.84
SYNE2-214ENST00000554928 H3BMQ9 156 aa9.77□□□□□ -0.85
SYNE2-214ENST00000554928 M0R1X1 148 aa9.77□□□□□ -0.85
SYNE2-214ENST00000554928 FGF16O43320 207 aa9.77□□□□□ -0.85
SYNE2-214ENST00000554928 APOA1P02647 267 aa9.77□□□□□ -0.85
SYNE2-214ENST00000554928 ZNF182P17025 639 aaPredicted RBP9.77□□□□□ -0.85
SYNE2-214ENST00000554928 ACTBP60709 375 aa9.77□□□□□ -0.85
SYNE2-214ENST00000554928 ARSJQ5FYB0 599 aaPredicted RBP9.77□□□□□ -0.85
SYNE2-214ENST00000554928 TCTEX1D4Q5JR98 221 aa9.77□□□□□ -0.85
SYNE2-214ENST00000554928 FAM71F2Q6NXP2 309 aa9.77□□□□□ -0.85
SYNE2-214ENST00000554928 CNIH2Q6PI25 160 aa9.77□□□□□ -0.85
SYNE2-214ENST00000554928 FAM71E2Q8N5Q1 922 aa9.77□□□□□ -0.85
SYNE2-214ENST00000554928 BEST4Q8NFU0 473 aa9.77□□□□□ -0.85
SYNE2-214ENST00000554928 DYNC2LI1Q8TCX1 351 aa9.77□□□□□ -0.85
SYNE2-214ENST00000554928 ISOC1Q96CN7 298 aa9.77□□□□□ -0.85
SYNE2-214ENST00000554928 ZNF221Q9UK13 617 aa9.77□□□□□ -0.85
SYNE2-214ENST00000554928 ANAPC10Q9UM13 185 aa9.77□□□□□ -0.85
SYNE2-214ENST00000554928 MRPS7Q9Y2R9 242 aaKnown RBP9.77□□□□□ -0.85
SYNE2-214ENST00000554928 ADARB2-AS1A8MUL3 147 aa9.76□□□□□ -0.85
SYNE2-214ENST00000554928 M0QZK8 103 aa9.76□□□□□ -0.85
SYNE2-214ENST00000554928 CTDSP2O14595 271 aa9.76□□□□□ -0.85
SYNE2-214ENST00000554928 PEX14O75381 377 aa9.76□□□□□ -0.85
SYNE2-214ENST00000554928 TUSC2O75896 110 aa9.76□□□□□ -0.85
SYNE2-214ENST00000554928 DIRAS3O95661 229 aa9.76□□□□□ -0.85
SYNE2-214ENST00000554928 TSPAN15O95858 294 aa9.76□□□□□ -0.85
SYNE2-214ENST00000554928 IGLV2-14P01704 120 aa9.76□□□□□ -0.85
SYNE2-214ENST00000554928 IGKV1-16P04430 117 aa9.76□□□□□ -0.85
SYNE2-214ENST00000554928 TMBIM6P55061 237 aa9.76□□□□□ -0.85
SYNE2-214ENST00000554928 MMDQ15546 238 aa9.76□□□□□ -0.85
SYNE2-214ENST00000554928 RNASE12Q5GAN4 147 aaKnown RBP9.76□□□□□ -0.85
SYNE2-214ENST00000554928 ZNF329Q86UD4 541 aa9.76□□□□□ -0.85
SYNE2-214ENST00000554928 SNX29P2Q8IUI4 249 aa9.76□□□□□ -0.85
SYNE2-214ENST00000554928 OR5AN1Q8NGI8 311 aa9.76□□□□□ -0.85
SYNE2-214ENST00000554928 RAB2BQ8WUD1 216 aa9.76□□□□□ -0.85
SYNE2-214ENST00000554928 ACOT12Q8WYK0 555 aa9.76□□□□□ -0.85
SYNE2-214ENST00000554928 GPHA2Q96T91 129 aa9.76□□□□□ -0.85
SYNE2-214ENST00000554928 FAM25AB3EWG3 89 aa9.75□□□□□ -0.85
SYNE2-214ENST00000554928 FAM25CB3EWG5 89 aa9.75□□□□□ -0.85
SYNE2-214ENST00000554928 FAM25GB3EWG6 89 aa9.75□□□□□ -0.85
SYNE2-214ENST00000554928 AADACP22760 399 aa9.75□□□□□ -0.85
SYNE2-214ENST00000554928 LAX1Q8IWV1 398 aa9.75□□□□□ -0.85
SYNE2-214ENST00000554928 CITED2Q99967 270 aaPredicted RBP9.75□□□□□ -0.85
SYNE2-214ENST00000554928 RBM38Q9H0Z9 239 aaKnown RBP9.75□□□□□ -0.85
SYNE2-214ENST00000554928 ZNF107Q9UII5 783 aaPredicted RBP9.75□□□□□ -0.85
SYNE2-214ENST00000554928 SCOCQ9UIL1 159 aa9.75□□□□□ -0.85
SYNE2-214ENST00000554928 OR2W1Q9Y3N9 320 aa9.75□□□□□ -0.85
SYNE2-214ENST00000554928 LINC00473A8K010 186 aa9.74□□□□□ -0.85
SYNE2-214ENST00000554928 H7C2Y5 167 aa9.74□□□□□ -0.85
SYNE2-214ENST00000554928 FCN1O00602 326 aa9.74□□□□□ -0.85
SYNE2-214ENST00000554928 NBR2O15453 112 aa9.74□□□□□ -0.85
SYNE2-214ENST00000554928 FBXO24O75426 580 aa9.74□□□□□ -0.85
SYNE2-214ENST00000554928 IGHG2P01859 326 aa9.74□□□□□ -0.85
SYNE2-214ENST00000554928 FCGR2CP31995 323 aa9.74□□□□□ -0.85
SYNE2-214ENST00000554928 ARPC4P59998 168 aa9.74□□□□□ -0.85
SYNE2-214ENST00000554928 RPL30P62888 115 aaKnown RBP9.74□□□□□ -0.85
SYNE2-214ENST00000554928 NDPQ00604 133 aa9.74□□□□□ -0.85
SYNE2-214ENST00000554928 PRR31Q5SQ13 230 aa9.74□□□□□ -0.85
SYNE2-214ENST00000554928 SLC35E3Q7Z769 313 aa9.74□□□□□ -0.85
SYNE2-214ENST00000554928 LYSMD2Q8IV50 215 aa9.74□□□□□ -0.85
SYNE2-214ENST00000554928 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.74□□□□□ -0.85
SYNE2-214ENST00000554928 OR5AU1Q8NGC0 362 aa9.74□□□□□ -0.85
SYNE2-214ENST00000554928 SGMS2Q8NHU3 365 aa9.74□□□□□ -0.85
SYNE2-214ENST00000554928 GPX8Q8TED1 209 aa9.74□□□□□ -0.85
SYNE2-214ENST00000554928 CMTM3Q96MX0 182 aa9.74□□□□□ -0.85
SYNE2-214ENST00000554928 FBXL15Q9H469 300 aa9.74□□□□□ -0.85
SYNE2-214ENST00000554928 TPSG1Q9NRR2 321 aa9.74□□□□□ -0.85
SYNE2-214ENST00000554928 LIN7CQ9NUP9 197 aaKnown RBP9.74□□□□□ -0.85
SYNE2-214ENST00000554928 EXTL2Q9UBQ6 330 aa9.74□□□□□ -0.85
SYNE2-214ENST00000554928 GAB2Q9UQC2 676 aa9.74□□□□□ -0.85
SYNE2-214ENST00000554928 WASHC3Q9Y3C0 194 aa9.74□□□□□ -0.85
SYNE2-214ENST00000554928 RBM7Q9Y580 266 aaKnown RBP9.74□□□□□ -0.85
SYNE2-214ENST00000554928 VWFP04275 2813 aa9.74□□□□□ -0.85
SYNE2-214ENST00000554928 FBN3Q75N90 2809 aa9.74□□□□□ -0.85
SYNE2-214ENST00000554928 OR5H14A6NHG9 310 aa9.73□□□□□ -0.85
SYNE2-214ENST00000554928 NDUFA3O95167 84 aa9.73□□□□□ -0.85
SYNE2-214ENST00000554928 PMP2P02689 132 aa9.73□□□□□ -0.85
SYNE2-214ENST00000554928 CTXN2P0C2S0 81 aa9.73□□□□□ -0.85
SYNE2-214ENST00000554928 OR5H8P0DN80 308 aa9.73□□□□□ -0.85
SYNE2-214ENST00000554928 NAT1P18440 290 aa9.73□□□□□ -0.85
SYNE2-214ENST00000554928 DUTP33316 252 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms