RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 OR10G9Q8NGN4 311 aa10.05□□□□□ -0.8
XRCC3-208ENST00000554811 OR10G7Q8NGN6 311 aa10.05□□□□□ -0.8
XRCC3-208ENST00000554811 POM121L2Q96KW2 1035 aa10.05□□□□□ -0.8
XRCC3-208ENST00000554811 ELOVL1Q9BW60 279 aa10.05□□□□□ -0.8
XRCC3-208ENST00000554811 SPG11Q96JI7 2443 aa10.05□□□□□ -0.8
XRCC3-208ENST00000554811 C9orf172C9J069 976 aa10.04□□□□□ -0.8
XRCC3-208ENST00000554811 PPP5D1E7EU14 171 aa10.04□□□□□ -0.8
XRCC3-208ENST00000554811 NAPSAO96009 420 aa10.04□□□□□ -0.8
XRCC3-208ENST00000554811 SOD3P08294 240 aa10.04□□□□□ -0.8
XRCC3-208ENST00000554811 GFRA1P56159 465 aa10.04□□□□□ -0.8
XRCC3-208ENST00000554811 TFF3Q07654 80 aa10.04□□□□□ -0.8
XRCC3-208ENST00000554811 GCSAMLQ5JQS6 135 aa10.04□□□□□ -0.8
XRCC3-208ENST00000554811 C16orf82Q7Z2V1 217 aa10.04□□□□□ -0.8
XRCC3-208ENST00000554811 LURAP1LQ8IV03 231 aa10.04□□□□□ -0.8
XRCC3-208ENST00000554811 SSMEM1Q8WWF3 244 aa10.04□□□□□ -0.8
XRCC3-208ENST00000554811 TAAR9Q96RI9 348 aa10.04□□□□□ -0.8
XRCC3-208ENST00000554811 DNPH1O43598 174 aa10.04□□□□□ -0.8
XRCC3-208ENST00000554811 IGKV1-5P01602 117 aa10.04□□□□□ -0.8
XRCC3-208ENST00000554811 PAX9P55771 341 aa10.04□□□□□ -0.8
XRCC3-208ENST00000554811 TRA2AQ13595 282 aaKnown RBP eCLIP10.04□□□□□ -0.8
XRCC3-208ENST00000554811 KHDC3LQ587J8 217 aa10.04□□□□□ -0.8
XRCC3-208ENST00000554811 PRAMEF5Q5TYX0 476 aa10.04□□□□□ -0.8
XRCC3-208ENST00000554811 OR51G1Q8NGK1 321 aa10.04□□□□□ -0.8
XRCC3-208ENST00000554811 WDYHV1Q96HA8 205 aa10.04□□□□□ -0.8
XRCC3-208ENST00000554811 TECTBQ96PL2 329 aa10.04□□□□□ -0.8
XRCC3-208ENST00000554811 PCGF1Q9BSM1 259 aa10.04□□□□□ -0.8
XRCC3-208ENST00000554811 J3QT63 122 aa10.04□□□□□ -0.8
XRCC3-208ENST00000554811 ACTL6BO94805 426 aa10.04□□□□□ -0.8
XRCC3-208ENST00000554811 HAND1O96004 215 aa10.04□□□□□ -0.8
XRCC3-208ENST00000554811 SLC25A6P12236 298 aa10.04□□□□□ -0.8
XRCC3-208ENST00000554811 GLIPR1P48060 266 aa10.04□□□□□ -0.8
XRCC3-208ENST00000554811 MSMO1Q15800 293 aa10.04□□□□□ -0.8
XRCC3-208ENST00000554811 SNIP1Q8TAD8 396 aaKnown RBP10.04□□□□□ -0.8
XRCC3-208ENST00000554811 OR51M1Q9H341 326 aa10.04□□□□□ -0.8
XRCC3-208ENST00000554811 GCM1Q9NP62 436 aa10.04□□□□□ -0.8
XRCC3-208ENST00000554811 FUT9Q9Y231 359 aa10.04□□□□□ -0.8
XRCC3-208ENST00000554811 SOX8P57073 446 aa10.03□□□□□ -0.8
XRCC3-208ENST00000554811 PDLIM3Q53GG5 364 aaPredicted RBP10.03□□□□□ -0.8
XRCC3-208ENST00000554811 OR2Z1Q8NG97 314 aa10.03□□□□□ -0.8
XRCC3-208ENST00000554811 PACRGQ96M98 296 aaPredicted RBP10.03□□□□□ -0.8
XRCC3-208ENST00000554811 ARV1Q9H2C2 271 aa10.03□□□□□ -0.8
XRCC3-208ENST00000554811 POLDIP2Q9Y2S7 368 aa10.03□□□□□ -0.8
XRCC3-208ENST00000554811 BTBD17A6NE02 478 aa10.03□□□□□ -0.8
XRCC3-208ENST00000554811 NTN3O00634 580 aaPredicted RBP10.03□□□□□ -0.8
XRCC3-208ENST00000554811 GCH1P30793 250 aa10.03□□□□□ -0.8
XRCC3-208ENST00000554811 SRSF6Q13247 344 aaKnown RBP10.03□□□□□ -0.8
XRCC3-208ENST00000554811 PCSK4Q6UW60 755 aa10.03□□□□□ -0.8
XRCC3-208ENST00000554811 KLF2Q9Y5W3 355 aaPredicted RBP10.03□□□□□ -0.8
XRCC3-208ENST00000554811 CEP295Q9C0D2 2601 aa10.03□□□□□ -0.8
XRCC3-208ENST00000554811 A0A1B0GU03 582 aa10.03□□□□□ -0.8
XRCC3-208ENST00000554811 LOC102723971A0A1B0GUV8 181 aa10.03□□□□□ -0.8
XRCC3-208ENST00000554811 OR5B21A6NL26 309 aa10.03□□□□□ -0.8
XRCC3-208ENST00000554811 C17orf98A8MV24 154 aa10.03□□□□□ -0.8
XRCC3-208ENST00000554811 PSPNO60542 156 aa10.03□□□□□ -0.8
XRCC3-208ENST00000554811 IGKV1-39P01597 117 aa10.03□□□□□ -0.8
XRCC3-208ENST00000554811 IGKV1D-39P04432 117 aa10.03□□□□□ -0.8
XRCC3-208ENST00000554811 GALR1P47211 349 aa10.03□□□□□ -0.8
XRCC3-208ENST00000554811 S100A12P80511 92 aa10.03□□□□□ -0.8
XRCC3-208ENST00000554811 CATR1Q13166 79 aa10.03□□□□□ -0.8
XRCC3-208ENST00000554811 TAF15Q92804 592 aaKnown RBP eCLIP10.03□□□□□ -0.8
XRCC3-208ENST00000554811 OR51I2Q9H344 312 aa10.03□□□□□ -0.8
XRCC3-208ENST00000554811 DECR2Q9NUI1 292 aa10.03□□□□□ -0.8
XRCC3-208ENST00000554811 IL36GQ9NZH8 169 aa10.03□□□□□ -0.8
XRCC3-208ENST00000554811 CFAP47Q6ZTR5 3102 aa10.02□□□□□ -0.8
XRCC3-208ENST00000554811 LNP1A1A4G5 178 aa10.02□□□□□ -0.8
XRCC3-208ENST00000554811 XKRY2A2RUG3 117 aa10.02□□□□□ -0.8
XRCC3-208ENST00000554811 M0R1X1 148 aa10.02□□□□□ -0.8
XRCC3-208ENST00000554811 DVL1O14640 695 aa10.02□□□□□ -0.8
XRCC3-208ENST00000554811 HSPB1P04792 205 aaKnown RBP10.02□□□□□ -0.8
XRCC3-208ENST00000554811 MPV17P39210 176 aa10.02□□□□□ -0.8
XRCC3-208ENST00000554811 TMEM241Q24JQ0 296 aa10.02□□□□□ -0.8
XRCC3-208ENST00000554811 BSXQ3C1V8 233 aa10.02□□□□□ -0.8
XRCC3-208ENST00000554811 FAM201AQ5SY85 155 aa10.02□□□□□ -0.8
XRCC3-208ENST00000554811 ZNF324BQ6AW86 544 aaPredicted RBP10.02□□□□□ -0.8
XRCC3-208ENST00000554811 DTD1Q8TEA8 209 aa10.02□□□□□ -0.8
XRCC3-208ENST00000554811 RIMS4Q9H426 269 aaPredicted RBP10.02□□□□□ -0.8
XRCC3-208ENST00000554811 MPC1Q9Y5U8 109 aa10.02□□□□□ -0.8
XRCC3-208ENST00000554811 ZNF705FA8MVS1 300 aaPredicted RBP10.02□□□□□ -0.81
XRCC3-208ENST00000554811 GALR2O43603 387 aaPredicted RBP10.02□□□□□ -0.81
XRCC3-208ENST00000554811 SCGB1D1O95968 90 aa10.02□□□□□ -0.81
XRCC3-208ENST00000554811 HBZP02008 142 aa10.02□□□□□ -0.81
XRCC3-208ENST00000554811 ZNF705DP0CH99 300 aaPredicted RBP10.02□□□□□ -0.81
XRCC3-208ENST00000554811 ZNF705BP0CI00 300 aaPredicted RBP10.02□□□□□ -0.81
XRCC3-208ENST00000554811 RAB4BP61018 213 aa10.02□□□□□ -0.81
XRCC3-208ENST00000554811 BATFQ16520 125 aa10.02□□□□□ -0.81
XRCC3-208ENST00000554811 ZNF766Q5HY98 468 aa10.02□□□□□ -0.81
XRCC3-208ENST00000554811 FAM78BQ5VT40 261 aa10.02□□□□□ -0.81
XRCC3-208ENST00000554811 FBXW9Q5XUX1 488 aa10.02□□□□□ -0.81
XRCC3-208ENST00000554811 ETFRF1Q6IPR1 90 aa10.02□□□□□ -0.81
XRCC3-208ENST00000554811 ZNF525Q8N782 197 aa10.02□□□□□ -0.81
XRCC3-208ENST00000554811 PLXNB1O43157 2135 aa10.02□□□□□ -0.81
XRCC3-208ENST00000554811 C1QTNF9BB2RNN3 333 aa10.02□□□□□ -0.81
XRCC3-208ENST00000554811 WISP2O76076 250 aa10.02□□□□□ -0.81
XRCC3-208ENST00000554811 SP1P08047 785 aa10.02□□□□□ -0.81
XRCC3-208ENST00000554811 THBS3P49746 956 aa10.02□□□□□ -0.81
XRCC3-208ENST00000554811 RPL30P62888 115 aaKnown RBP10.02□□□□□ -0.81
XRCC3-208ENST00000554811 ZNF506Q5JVG8 444 aa10.02□□□□□ -0.81
XRCC3-208ENST00000554811 METRNQ9UJH8 293 aa10.02□□□□□ -0.81
XRCC3-208ENST00000554811 KLF13Q9Y2Y9 288 aaPredicted RBP10.02□□□□□ -0.81
XRCC3-208ENST00000554811 ZNF320A2RRD8 509 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms