RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 FAM58AQ8N1B3 248 aa3.69□□□□□ -1.82
ATXN3-228ENST00000554592 Q8N6K4 173 aa3.69□□□□□ -1.82
ATXN3-228ENST00000554592 Q8N9W7 124 aa3.69□□□□□ -1.82
ATXN3-228ENST00000554592 DMBX1Q8NFW5 382 aa3.69□□□□□ -1.82
ATXN3-228ENST00000554592 OR11H4Q8NGC9 324 aa3.69□□□□□ -1.82
ATXN3-228ENST00000554592 CCDC107Q8WV48 283 aa3.69□□□□□ -1.82
ATXN3-228ENST00000554592 NRBF2Q96F24 287 aa3.69□□□□□ -1.82
ATXN3-228ENST00000554592 CENPNQ96H22 339 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-228ENST00000554592 OR5B12Q96R08 314 aa3.69□□□□□ -1.82
ATXN3-228ENST00000554592 S1PR3Q99500 378 aa3.69□□□□□ -1.82
ATXN3-228ENST00000554592 BCL7BQ9BQE9 202 aa3.69□□□□□ -1.82
ATXN3-228ENST00000554592 GORASP2Q9H8Y8 452 aa3.69□□□□□ -1.82
ATXN3-228ENST00000554592 MED20Q9H944 212 aa3.69□□□□□ -1.82
ATXN3-228ENST00000554592 PLGRKTQ9HBL7 147 aa3.69□□□□□ -1.82
ATXN3-228ENST00000554592 PLSCR3Q9NRY6 295 aa3.69□□□□□ -1.82
ATXN3-228ENST00000554592 NUFIP1Q9UHK0 495 aaKnown RBP3.69□□□□□ -1.82
ATXN3-228ENST00000554592 LAMP5Q9UJQ1 280 aa3.69□□□□□ -1.82
ATXN3-228ENST00000554592 KLHDC2Q9Y2U9 406 aa3.69□□□□□ -1.82
ATXN3-228ENST00000554592 TMED3Q9Y3Q3 217 aa3.69□□□□□ -1.82
ATXN3-228ENST00000554592 U3KQV3 271 aa3.69□□□□□ -1.82
ATXN3-228ENST00000554592 V9GYS6 101 aa3.69□□□□□ -1.82
ATXN3-228ENST00000554592 PCLOQ9Y6V0 5065 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 RYR1P21817 5038 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 IGKV1-27A0A075B6S5 117 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 IGHV1-3A0A0C4DH29 117 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 TRBV2A0A0J9YWF9 115 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 A0A1B0GTI1 187 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 A6NIN4 97 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 IFITM10A6NMD0 228 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 H0Y980 276 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 SIRPB1O00241 398 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 TNFRSF11BO00300 401 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 MRPS14O60783 128 aaKnown RBP3.68□□□□□ -1.82
ATXN3-228ENST00000554592 ENTPD6O75354 484 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 CCNB2O95067 398 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 OR2H2O95918 312 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 MOSP00540 346 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 SERPINA3P01011 423 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 IGLV1-51P01701 117 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 TTRP02766 147 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 SEMG1P04279 462 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 FABP3P05413 133 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 CSN2P05814 226 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 PRKACAP17612 351 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 CD1BP29016 333 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 NPBWR2P48146 333 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 RIDAP52758 137 aaKnown RBP3.68□□□□□ -1.82
ATXN3-228ENST00000554592 HCCSP53701 268 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 ATP1B3P54709 279 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 PITPNAQ00169 270 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 MFGE8Q08431 387 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-228ENST00000554592 ZNF816Q0VGE8 651 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-228ENST00000554592 UBE2V2Q15819 145 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 LRRC36Q1X8D7 754 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 SLC35D3Q5M8T2 416 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 UTF1Q5T230 341 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 RNLSQ5VYX0 342 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 FAM53AQ6NSI3 398 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-228ENST00000554592 GPR141Q7Z602 305 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 ZNF554Q86TJ5 538 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 CATSPERDQ86XM0 798 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 ZNF679Q8IYX0 411 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 ELMOD2Q8IZ81 293 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 MAPKAPK5-AS1Q8N8E1 139 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 OR10A7Q8NGE5 316 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 OR9Q2Q8NGE9 314 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 OR10X1Q8NGY0 326 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 CANT1Q8WVQ1 401 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 ASB17Q8WXJ9 295 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 ARPC1AQ92747 370 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 FLYWCH2Q96CP2 140 aaKnown RBP3.68□□□□□ -1.82
ATXN3-228ENST00000554592 BORCS8Q96FH0 119 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 CNBD2Q96M20 576 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 ST6GALNAC5Q9BVH7 336 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 TMED9Q9BVK6 235 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 TOLLIPQ9H0E2 274 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 NCOR1P1Q9H4R4 102 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 Q9H8V8 135 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 LINC00574Q9H8X3 128 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 HMG20AQ9NP66 347 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 EXOSC4Q9NPD3 245 aaKnown RBP3.68□□□□□ -1.82
ATXN3-228ENST00000554592 RBFOX1Q9NWB1 397 aaKnown RBP3.68□□□□□ -1.82
ATXN3-228ENST00000554592 IDI2-AS1Q9NZ38 188 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 MRM2Q9UI43 246 aaKnown RBP3.68□□□□□ -1.82
ATXN3-228ENST00000554592 STUB1Q9UNE7 303 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 COPS3Q9UNS2 423 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 PSG11Q9UQ72 335 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 WDR83OSQ9Y284 106 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 MRPS28Q9Y2Q9 187 aaKnown RBP3.68□□□□□ -1.82
ATXN3-228ENST00000554592 TMEM14AQ9Y6G1 99 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 CSMD3Q7Z407 3707 aa3.68□□□□□ -1.82
ATXN3-228ENST00000554592 IGHV3-72A0A0B4J1Y9 119 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 CCDC160A6NGH7 325 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 LOC110117498-PIK3R3F6TDL0 507 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 HSD17B6O14756 317 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 DEGS1O15121 323 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 PFDN1O60925 122 aa3.67□□□□□ -1.82
ATXN3-228ENST00000554592 NOL3O60936 208 aaKnown RBP3.67□□□□□ -1.82
ATXN3-228ENST00000554592 GATBO75879 557 aaKnown RBP3.67□□□□□ -1.82
ATXN3-228ENST00000554592 SOX14O95416 240 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms