RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 LINC00527Q9UJ94 153 aa6.88□□□□□ -1.31
ACTN1-213ENST00000554508 ZNF580Q9UK33 172 aa6.88□□□□□ -1.31
ACTN1-213ENST00000554508 TRAV18A0A075B6X5 111 aa6.87□□□□□ -1.31
ACTN1-213ENST00000554508 SAA2-SAA4A0A096LPE2 208 aa6.87□□□□□ -1.31
ACTN1-213ENST00000554508 LINC01548A6NM66 108 aa6.87□□□□□ -1.31
ACTN1-213ENST00000554508 FAM25AB3EWG3 89 aa6.87□□□□□ -1.31
ACTN1-213ENST00000554508 FAM25CB3EWG5 89 aa6.87□□□□□ -1.31
ACTN1-213ENST00000554508 FAM25GB3EWG6 89 aa6.87□□□□□ -1.31
ACTN1-213ENST00000554508 ZNF701M0R085 212 aaPredicted RBP6.87□□□□□ -1.31
ACTN1-213ENST00000554508 RAB29O14966 203 aa6.87□□□□□ -1.31
ACTN1-213ENST00000554508 RGS5O15539 181 aa6.87□□□□□ -1.31
ACTN1-213ENST00000554508 HPGDSO60760 199 aa6.87□□□□□ -1.31
ACTN1-213ENST00000554508 ELANEP08246 267 aa6.87□□□□□ -1.31
ACTN1-213ENST00000554508 CD3GP09693 182 aa6.87□□□□□ -1.31
ACTN1-213ENST00000554508 SAA2P0DJI9 122 aaPredicted RBP6.87□□□□□ -1.31
ACTN1-213ENST00000554508 OR5H8P0DN80 308 aa6.87□□□□□ -1.31
ACTN1-213ENST00000554508 HIST1H1DP16402 221 aaKnown RBP6.87□□□□□ -1.31
ACTN1-213ENST00000554508 ZBTB25P24278 435 aa6.87□□□□□ -1.31
ACTN1-213ENST00000554508 F2RL1P55085 397 aa6.87□□□□□ -1.31
ACTN1-213ENST00000554508 HLA-DRB3P79483 266 aa6.87□□□□□ -1.31
ACTN1-213ENST00000554508 ARFRP1Q13795 201 aa6.87□□□□□ -1.31
ACTN1-213ENST00000554508 ARL6IP1Q15041 203 aa6.87□□□□□ -1.31
ACTN1-213ENST00000554508 MMDQ15546 238 aa6.87□□□□□ -1.31
ACTN1-213ENST00000554508 CDNFQ49AH0 187 aa6.87□□□□□ -1.31
ACTN1-213ENST00000554508 CMSS1Q9BQ75 279 aaKnown RBP6.87□□□□□ -1.31
ACTN1-213ENST00000554508 ZNF251Q9BRH9 671 aa6.87□□□□□ -1.31
ACTN1-213ENST00000554508 HDHD3Q9BSH5 251 aaPredicted RBP6.87□□□□□ -1.31
ACTN1-213ENST00000554508 DCUN1D5Q9BTE7 237 aa6.87□□□□□ -1.31
ACTN1-213ENST00000554508 MRPL20Q9BYC9 149 aaKnown RBP6.87□□□□□ -1.31
ACTN1-213ENST00000554508 GPR61Q9BZJ8 451 aa6.87□□□□□ -1.31
ACTN1-213ENST00000554508 Q9N2K0 584 aa6.87□□□□□ -1.31
ACTN1-213ENST00000554508 C12orf4Q9NQ89 552 aa6.87□□□□□ -1.31
ACTN1-213ENST00000554508 NECAP2Q9NVZ3 263 aa6.87□□□□□ -1.31
ACTN1-213ENST00000554508 CCDC59Q9P031 241 aaKnown RBP6.87□□□□□ -1.31
ACTN1-213ENST00000554508 SLC23A1Q9UHI7 598 aa6.87□□□□□ -1.31
ACTN1-213ENST00000554508 A0A0A6YYH2 397 aa6.86□□□□□ -1.31
ACTN1-213ENST00000554508 OR5H14A6NHG9 310 aa6.86□□□□□ -1.31
ACTN1-213ENST00000554508 A6NJ64 397 aa6.86□□□□□ -1.31
ACTN1-213ENST00000554508 NUDT19A8MXV4 375 aa6.86□□□□□ -1.31
ACTN1-213ENST00000554508 MFNGO00587 321 aa6.86□□□□□ -1.31
ACTN1-213ENST00000554508 HSPA12AO43301 675 aa6.86□□□□□ -1.31
ACTN1-213ENST00000554508 APOA1P02647 267 aa6.86□□□□□ -1.31
ACTN1-213ENST00000554508 IGF1P05019 195 aa6.86□□□□□ -1.31
ACTN1-213ENST00000554508 EIF4EP06730 217 aaKnown RBP6.86□□□□□ -1.31
ACTN1-213ENST00000554508 IGLL1P15814 213 aa6.86□□□□□ -1.31
ACTN1-213ENST00000554508 ELK1P19419 428 aa6.86□□□□□ -1.31
ACTN1-213ENST00000554508 VDAC1P21796 283 aa6.86□□□□□ -1.31
ACTN1-213ENST00000554508 MC5RP33032 325 aa6.86□□□□□ -1.31
ACTN1-213ENST00000554508 TALDO1P37837 337 aa6.86□□□□□ -1.31
ACTN1-213ENST00000554508 CEACAM6P40199 344 aa6.86□□□□□ -1.31
ACTN1-213ENST00000554508 MYCNOSP40205 109 aa6.86□□□□□ -1.31
ACTN1-213ENST00000554508 OR3A3P47888 321 aa6.86□□□□□ -1.31
ACTN1-213ENST00000554508 THBS3P49746 956 aa6.86□□□□□ -1.31
ACTN1-213ENST00000554508 ACTBP60709 375 aa6.86□□□□□ -1.31
ACTN1-213ENST00000554508 FOXE3Q13461 319 aa6.86□□□□□ -1.31
ACTN1-213ENST00000554508 CXorf66Q5JRM2 361 aaPredicted RBP6.86□□□□□ -1.31
ACTN1-213ENST00000554508 TMEM69Q5SWH9 247 aa6.86□□□□□ -1.31
ACTN1-213ENST00000554508 FOXB2Q5VYV0 432 aa6.86□□□□□ -1.31
ACTN1-213ENST00000554508 Q6ZPA2 131 aa6.86□□□□□ -1.31
ACTN1-213ENST00000554508 ZNF695Q8IW36 515 aa6.86□□□□□ -1.31
ACTN1-213ENST00000554508 LINC00482Q8N8I6 264 aa6.86□□□□□ -1.31
ACTN1-213ENST00000554508 RNF152Q8N8N0 203 aa6.86□□□□□ -1.31
ACTN1-213ENST00000554508 NPBQ8NG41 125 aa6.86□□□□□ -1.31
ACTN1-213ENST00000554508 MCFD2Q8NI22 146 aa6.86□□□□□ -1.31
ACTN1-213ENST00000554508 DGCR14Q96DF8 476 aaKnown RBP6.86□□□□□ -1.31
ACTN1-213ENST00000554508 AGMATQ9BSE5 352 aa6.86□□□□□ -1.31
ACTN1-213ENST00000554508 MCRIP2Q9BUT9 160 aaKnown RBP6.86□□□□□ -1.31
ACTN1-213ENST00000554508 C6orf62Q9GZU0 229 aaPredicted RBP6.86□□□□□ -1.31
ACTN1-213ENST00000554508 C11orf54Q9H0W9 315 aaPredicted RBP6.86□□□□□ -1.31
ACTN1-213ENST00000554508 IFI27L2Q9H2X8 130 aa6.86□□□□□ -1.31
ACTN1-213ENST00000554508 KIAA1456Q9P272 454 aa6.86□□□□□ -1.31
ACTN1-213ENST00000554508 ZNF107Q9UII5 783 aaPredicted RBP6.86□□□□□ -1.31
ACTN1-213ENST00000554508 KCNK7Q9Y2U2 307 aa6.86□□□□□ -1.31
ACTN1-213ENST00000554508 TMEM235A6NFC5 223 aa6.85□□□□□ -1.31
ACTN1-213ENST00000554508 TRDCB7Z8K6 153 aa6.85□□□□□ -1.31
ACTN1-213ENST00000554508 NBR2O15453 112 aa6.85□□□□□ -1.31
ACTN1-213ENST00000554508 ST8SIA5O15466 376 aa6.85□□□□□ -1.31
ACTN1-213ENST00000554508 XRCC3O43542 346 aa6.85□□□□□ -1.31
ACTN1-213ENST00000554508 RBBP9O75884 186 aa6.85□□□□□ -1.31
ACTN1-213ENST00000554508 IGHG4P01861 327 aa6.85□□□□□ -1.31
ACTN1-213ENST00000554508 HLA-DRB1P01911 266 aa6.85□□□□□ -1.31
ACTN1-213ENST00000554508 GSTP1P09211 210 aaKnown RBP6.85□□□□□ -1.31
ACTN1-213ENST00000554508 SCTP09683 121 aa6.85□□□□□ -1.31
ACTN1-213ENST00000554508 CT45A6P0DMU7 189 aa6.85□□□□□ -1.31
ACTN1-213ENST00000554508 CT45A5P0DMU8 189 aa6.85□□□□□ -1.31
ACTN1-213ENST00000554508 CT45A7P0DMV0 189 aa6.85□□□□□ -1.31
ACTN1-213ENST00000554508 CDX1P47902 265 aaPredicted RBP6.85□□□□□ -1.31
ACTN1-213ENST00000554508 GNG2P59768 71 aa6.85□□□□□ -1.31
ACTN1-213ENST00000554508 CFHR3Q02985 330 aa6.85□□□□□ -1.31
ACTN1-213ENST00000554508 C5orf64Q2M2E5 130 aa6.85□□□□□ -1.31
ACTN1-213ENST00000554508 ZNF260Q3ZCT1 412 aa6.85□□□□□ -1.31
ACTN1-213ENST00000554508 HACD4Q5VWC8 232 aa6.85□□□□□ -1.31
ACTN1-213ENST00000554508 LIN54Q6MZP7 749 aa6.85□□□□□ -1.31
ACTN1-213ENST00000554508 C8orf86Q6ZUL3 223 aa6.85□□□□□ -1.31
ACTN1-213ENST00000554508 LAX1Q8IWV1 398 aa6.85□□□□□ -1.31
ACTN1-213ENST00000554508 MRPL41Q8IXM3 137 aaKnown RBP6.85□□□□□ -1.31
ACTN1-213ENST00000554508 KLHL30-AS1Q8NEE0 82 aa6.85□□□□□ -1.31
ACTN1-213ENST00000554508 OR4A4PQ8NGN8 299 aa6.85□□□□□ -1.31
ACTN1-213ENST00000554508 ABHD14BQ96IU4 210 aa6.85□□□□□ -1.31
ACTN1-213ENST00000554508 RITA1Q96K30 269 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms