RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 LPLP06858 475 aa10.44□□□□□ -0.74
SHMT2-211ENST00000554310 VSIG10L2P0DP72 767 aa10.44□□□□□ -0.74
SHMT2-211ENST00000554310 RCC1P18754 421 aaPredicted RBP10.44□□□□□ -0.74
SHMT2-211ENST00000554310 VDAC2P45880 294 aaPredicted RBP10.44□□□□□ -0.74
SHMT2-211ENST00000554310 ZNF816Q0VGE8 651 aaPredicted RBP10.44□□□□□ -0.74
SHMT2-211ENST00000554310 HABP2Q14520 560 aaPredicted RBP10.44□□□□□ -0.74
SHMT2-211ENST00000554310 ZFP69Q49AA0 526 aa10.44□□□□□ -0.74
SHMT2-211ENST00000554310 MOB1BQ7L9L4 216 aa10.44□□□□□ -0.74
SHMT2-211ENST00000554310 DRAM1Q8N682 238 aa10.44□□□□□ -0.74
SHMT2-211ENST00000554310 TMEM229BQ8NBD8 167 aa10.44□□□□□ -0.74
SHMT2-211ENST00000554310 SULT4A1Q9BR01 284 aa10.44□□□□□ -0.74
SHMT2-211ENST00000554310 NICN1Q9BSH3 213 aa10.44□□□□□ -0.74
SHMT2-211ENST00000554310 C20orf85Q9H1P6 137 aa10.44□□□□□ -0.74
SHMT2-211ENST00000554310 TAF9BQ9HBM6 251 aa10.44□□□□□ -0.74
SHMT2-211ENST00000554310 MOB4Q9Y3A3 225 aa10.44□□□□□ -0.74
SHMT2-211ENST00000554310 IGHV3-43A0A0B4J1X8 118 aa10.43□□□□□ -0.74
SHMT2-211ENST00000554310 A0A1W2PPE3 182 aa10.43□□□□□ -0.74
SHMT2-211ENST00000554310 FAM90A9PA6NNJ1 464 aa10.43□□□□□ -0.74
SHMT2-211ENST00000554310 RAB27BO00194 218 aa10.43□□□□□ -0.74
SHMT2-211ENST00000554310 TXNL1O43396 289 aa10.43□□□□□ -0.74
SHMT2-211ENST00000554310 FBXO24O75426 580 aa10.43□□□□□ -0.74
SHMT2-211ENST00000554310 NDUFB6O95139 128 aa10.43□□□□□ -0.74
SHMT2-211ENST00000554310 GAPDHP04406 335 aaKnown RBP10.43□□□□□ -0.74
SHMT2-211ENST00000554310 SNRNP70P08621 437 aaKnown RBP10.43□□□□□ -0.74
SHMT2-211ENST00000554310 AKAIN1P0CW23 69 aa10.43□□□□□ -0.74
SHMT2-211ENST00000554310 IGHV3-43DP0DP04 118 aa10.43□□□□□ -0.74
SHMT2-211ENST00000554310 BLVRBP30043 206 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-211ENST00000554310 MECP2P51608 486 aaKnown RBP10.43□□□□□ -0.74
SHMT2-211ENST00000554310 BLCAPP62952 87 aa10.43□□□□□ -0.74
SHMT2-211ENST00000554310 CBX3Q13185 183 aa10.43□□□□□ -0.74
SHMT2-211ENST00000554310 DIAPH2-AS1Q14236 149 aa10.43□□□□□ -0.74
SHMT2-211ENST00000554310 ZNF260Q3ZCT1 412 aa10.43□□□□□ -0.74
SHMT2-211ENST00000554310 SLC25A48Q6ZT89 311 aaKnown RBP10.43□□□□□ -0.74
SHMT2-211ENST00000554310 C6orf201Q7Z4U5 140 aa10.43□□□□□ -0.74
SHMT2-211ENST00000554310 PRR18Q8N4B5 295 aa10.43□□□□□ -0.74
SHMT2-211ENST00000554310 ZNF439Q8NDP4 499 aa10.43□□□□□ -0.74
SHMT2-211ENST00000554310 OR1L1Q8NH94 360 aa10.43□□□□□ -0.74
SHMT2-211ENST00000554310 WNT10AQ9GZT5 417 aa10.43□□□□□ -0.74
SHMT2-211ENST00000554310 LPAR5Q9H1C0 372 aa10.43□□□□□ -0.74
SHMT2-211ENST00000554310 RANGRFQ9HD47 186 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-211ENST00000554310 JPT1Q9UK76 154 aa10.43□□□□□ -0.74
SHMT2-211ENST00000554310 IGHV1-3A0A0C4DH29 117 aa10.42□□□□□ -0.74
SHMT2-211ENST00000554310 NAPSAO96009 420 aa10.42□□□□□ -0.74
SHMT2-211ENST00000554310 ZNF137PP52743 207 aa10.42□□□□□ -0.74
SHMT2-211ENST00000554310 TAS2R19P59542 299 aa10.42□□□□□ -0.74
SHMT2-211ENST00000554310 HTD2P86397 168 aa10.42□□□□□ -0.74
SHMT2-211ENST00000554310 MOGAT2Q3SYC2 334 aa10.42□□□□□ -0.74
SHMT2-211ENST00000554310 FBLN7Q53RD9 439 aa10.42□□□□□ -0.74
SHMT2-211ENST00000554310 FAM89BQ8N5H3 189 aa10.42□□□□□ -0.74
SHMT2-211ENST00000554310 OR10V1Q8NGI7 309 aa10.42□□□□□ -0.74
SHMT2-211ENST00000554310 OR4C16Q8NGL9 310 aa10.42□□□□□ -0.74
SHMT2-211ENST00000554310 WIPF2Q8TF74 440 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-211ENST00000554310 GIMAP1Q8WWP7 306 aa10.42□□□□□ -0.74
SHMT2-211ENST00000554310 ST6GALNAC6Q969X2 333 aa10.42□□□□□ -0.74
SHMT2-211ENST00000554310 ZNF486Q96H40 463 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-211ENST00000554310 CYYR1Q96J86 154 aa10.42□□□□□ -0.74
SHMT2-211ENST00000554310 FAAP24Q9BTP7 215 aa10.42□□□□□ -0.74
SHMT2-211ENST00000554310 MED28Q9H204 178 aa10.42□□□□□ -0.74
SHMT2-211ENST00000554310 OR51J1Q9H342 316 aa10.42□□□□□ -0.74
SHMT2-211ENST00000554310 RIMS4Q9H426 269 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-211ENST00000554310 OR2S2Q9NQN1 319 aa10.42□□□□□ -0.74
SHMT2-211ENST00000554310 PLEKHJ1Q9NW61 149 aa10.42□□□□□ -0.74
SHMT2-211ENST00000554310 MCUBQ9NWR8 336 aa10.42□□□□□ -0.74
SHMT2-211ENST00000554310 HSF4Q9ULV5 492 aa10.42□□□□□ -0.74
SHMT2-211ENST00000554310 A0A0A6YYD4 124 aa10.41□□□□□ -0.74
SHMT2-211ENST00000554310 FOXI3A8MTJ6 420 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-211ENST00000554310 SLC31A2O15432 143 aa10.41□□□□□ -0.74
SHMT2-211ENST00000554310 FGF16O43320 207 aa10.41□□□□□ -0.74
SHMT2-211ENST00000554310 RGS11O94810 467 aa10.41□□□□□ -0.74
SHMT2-211ENST00000554310 TSPAN15O95858 294 aa10.41□□□□□ -0.74
SHMT2-211ENST00000554310 IGKV1D-33P01593 117 aa10.41□□□□□ -0.74
SHMT2-211ENST00000554310 IGKV1-33P01594 117 aa10.41□□□□□ -0.74
SHMT2-211ENST00000554310 IL5P05113 134 aa10.41□□□□□ -0.74
SHMT2-211ENST00000554310 TMEM11P17152 192 aa10.41□□□□□ -0.74
SHMT2-211ENST00000554310 RCVRNP35243 200 aa10.41□□□□□ -0.74
SHMT2-211ENST00000554310 REG1BP48304 166 aa10.41□□□□□ -0.74
SHMT2-211ENST00000554310 CD83Q01151 205 aa10.41□□□□□ -0.74
SHMT2-211ENST00000554310 HES1Q14469 280 aa10.41□□□□□ -0.74
SHMT2-211ENST00000554310 RBMS2Q15434 407 aaKnown RBP10.41□□□□□ -0.74
SHMT2-211ENST00000554310 HMGN3Q15651 99 aa10.41□□□□□ -0.74
SHMT2-211ENST00000554310 TMEM95Q3KNT9 176 aa10.41□□□□□ -0.74
SHMT2-211ENST00000554310 ABCA11PQ4W5N1 156 aa10.41□□□□□ -0.74
SHMT2-211ENST00000554310 FAM53AQ6NSI3 398 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-211ENST00000554310 STEAP1BQ6NZ63 245 aa10.41□□□□□ -0.74
SHMT2-211ENST00000554310 Q6ZS46 218 aa10.41□□□□□ -0.74
SHMT2-211ENST00000554310 NOXA1Q86UR1 476 aa10.41□□□□□ -0.74
SHMT2-211ENST00000554310 OR56B1Q8NGI3 324 aa10.41□□□□□ -0.74
SHMT2-211ENST00000554310 OR10R2Q8NGX6 335 aa10.41□□□□□ -0.74
SHMT2-211ENST00000554310 RTN4IP1Q8WWV3 396 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-211ENST00000554310 GALMQ96C23 342 aa10.41□□□□□ -0.74
SHMT2-211ENST00000554310 ABHD14AQ9BUJ0 271 aa10.41□□□□□ -0.74
SHMT2-211ENST00000554310 CHMP1AQ9HD42 196 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-211ENST00000554310 C12orf4Q9NQ89 552 aa10.41□□□□□ -0.74
SHMT2-211ENST00000554310 TRBV6-6A0A0A6YYG2 114 aa10.4□□□□□ -0.74
SHMT2-211ENST00000554310 SOCS1O15524 211 aa10.4□□□□□ -0.74
SHMT2-211ENST00000554310 C1QBP02746 253 aa10.4□□□□□ -0.74
SHMT2-211ENST00000554310 CD74P04233 296 aa10.4□□□□□ -0.74
SHMT2-211ENST00000554310 AMY1AP04745 511 aa10.4□□□□□ -0.74
SHMT2-211ENST00000554310 AMY2AP04746 511 aa10.4□□□□□ -0.74
SHMT2-211ENST00000554310 GSTP1P09211 210 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms