RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 PAX8Q06710 450 aa9.59□□□□□ -0.87
NEK9-202ENST00000553823 SLC9A3R2Q15599 337 aa9.59□□□□□ -0.87
NEK9-202ENST00000553823 ZNF66Q6ZN08 573 aa9.59□□□□□ -0.87
NEK9-202ENST00000553823 C12orf45Q8N5I9 185 aaPredicted RBP9.59□□□□□ -0.87
NEK9-202ENST00000553823 OR10X1Q8NGY0 326 aa9.59□□□□□ -0.87
NEK9-202ENST00000553823 MITD1Q8WV92 249 aa9.59□□□□□ -0.87
NEK9-202ENST00000553823 GPHA2Q96T91 129 aa9.59□□□□□ -0.87
NEK9-202ENST00000553823 MED28Q9H204 178 aa9.59□□□□□ -0.87
NEK9-202ENST00000553823 ZNRD1Q9P1U0 126 aa9.59□□□□□ -0.87
NEK9-202ENST00000553823 ITPR3Q14573 2671 aa9.59□□□□□ -0.87
NEK9-202ENST00000553823 SAA2-SAA4A0A096LPE2 208 aa9.58□□□□□ -0.88
NEK9-202ENST00000553823 TRAV20A0A0B4J274 112 aa9.58□□□□□ -0.88
NEK9-202ENST00000553823 A0A0B4J2A0 478 aa9.58□□□□□ -0.88
NEK9-202ENST00000553823 HMX3A6NHT5 357 aa9.58□□□□□ -0.88
NEK9-202ENST00000553823 M0R1X1 148 aa9.58□□□□□ -0.88
NEK9-202ENST00000553823 PROP1O75360 226 aa9.58□□□□□ -0.88
NEK9-202ENST00000553823 B3GALNT1O75752 331 aa9.58□□□□□ -0.88
NEK9-202ENST00000553823 TOX4O94842 621 aa9.58□□□□□ -0.88
NEK9-202ENST00000553823 OR5AC1P0C628 307 aa9.58□□□□□ -0.88
NEK9-202ENST00000553823 SAA2P0DJI9 122 aaPredicted RBP9.58□□□□□ -0.88
NEK9-202ENST00000553823 MMP9P14780 707 aa9.58□□□□□ -0.88
NEK9-202ENST00000553823 F2RP25116 425 aa9.58□□□□□ -0.88
NEK9-202ENST00000553823 IL3RAP26951 378 aa9.58□□□□□ -0.88
NEK9-202ENST00000553823 PRB3Q04118 309 aaPredicted RBP9.58□□□□□ -0.88
NEK9-202ENST00000553823 CATR1Q13166 79 aa9.58□□□□□ -0.88
NEK9-202ENST00000553823 EIF4EBP1Q13541 118 aaPredicted RBP9.58□□□□□ -0.88
NEK9-202ENST00000553823 TMEM187Q14656 261 aa9.58□□□□□ -0.88
NEK9-202ENST00000553823 SP6Q3SY56 376 aa9.58□□□□□ -0.88
NEK9-202ENST00000553823 RPL39P5Q59GN2 51 aa9.58□□□□□ -0.88
NEK9-202ENST00000553823 NCR3LG1Q68D85 454 aa9.58□□□□□ -0.88
NEK9-202ENST00000553823 VMO1Q7Z5L0 202 aa9.58□□□□□ -0.88
NEK9-202ENST00000553823 ODF3L1Q8IXM7 274 aa9.58□□□□□ -0.88
NEK9-202ENST00000553823 PNKDQ8N490 385 aa9.58□□□□□ -0.88
NEK9-202ENST00000553823 LINC01356Q8N9X3 169 aa9.58□□□□□ -0.88
NEK9-202ENST00000553823 UXS1Q8NBZ7 420 aa9.58□□□□□ -0.88
NEK9-202ENST00000553823 BEND2Q8NDZ0 799 aa9.58□□□□□ -0.88
NEK9-202ENST00000553823 OR11H6Q8NGC7 330 aa9.58□□□□□ -0.88
NEK9-202ENST00000553823 OR51H1Q8NH63 302 aa9.58□□□□□ -0.88
NEK9-202ENST00000553823 COQ8AQ8NI60 647 aa9.58□□□□□ -0.88
NEK9-202ENST00000553823 S1PR3Q99500 378 aa9.58□□□□□ -0.88
NEK9-202ENST00000553823 PHB2Q99623 299 aa9.58□□□□□ -0.88
NEK9-202ENST00000553823 HSD17B10Q99714 261 aaKnown RBP9.58□□□□□ -0.88
NEK9-202ENST00000553823 PCGF1Q9BSM1 259 aa9.58□□□□□ -0.88
NEK9-202ENST00000553823 LIN7CQ9NUP9 197 aaKnown RBP9.58□□□□□ -0.88
NEK9-202ENST00000553823 SHPKQ9UHJ6 478 aa9.58□□□□□ -0.88
NEK9-202ENST00000553823 FLNBO75369 2602 aaKnown RBP9.58□□□□□ -0.88
NEK9-202ENST00000553823 H0Y980 276 aa9.57□□□□□ -0.88
NEK9-202ENST00000553823 IGLV1-47P01700 117 aa9.57□□□□□ -0.88
NEK9-202ENST00000553823 TRAPPC2P0DI81 140 aa9.57□□□□□ -0.88
NEK9-202ENST00000553823 TRAPPC2BP0DI82 140 aa9.57□□□□□ -0.88
NEK9-202ENST00000553823 ZNF16P17020 682 aaPredicted RBP9.57□□□□□ -0.88
NEK9-202ENST00000553823 GATA3P23771 443 aa9.57□□□□□ -0.88
NEK9-202ENST00000553823 DUTP33316 252 aaKnown RBP9.57□□□□□ -0.88
NEK9-202ENST00000553823 ZNF137PP52743 207 aa9.57□□□□□ -0.88
NEK9-202ENST00000553823 RPL30P62888 115 aaKnown RBP9.57□□□□□ -0.88
NEK9-202ENST00000553823 KLRD1Q13241 179 aa9.57□□□□□ -0.88
NEK9-202ENST00000553823 FCN2Q15485 313 aa9.57□□□□□ -0.88
NEK9-202ENST00000553823 HLA-DRB5Q30154 266 aa9.57□□□□□ -0.88
NEK9-202ENST00000553823 ANKRD55Q3KP44 614 aa9.57□□□□□ -0.88
NEK9-202ENST00000553823 DCAF12L2Q5VW00 463 aa9.57□□□□□ -0.88
NEK9-202ENST00000553823 LIAT1Q6ZQX7 453 aa9.57□□□□□ -0.88
NEK9-202ENST00000553823 ZNF833PQ6ZTB9 187 aa9.57□□□□□ -0.88
NEK9-202ENST00000553823 MAPK1IP1LQ8NDC0 245 aa9.57□□□□□ -0.88
NEK9-202ENST00000553823 WFDC11Q8NEX6 87 aa9.57□□□□□ -0.88
NEK9-202ENST00000553823 GLYATL2Q8WU03 294 aa9.57□□□□□ -0.88
NEK9-202ENST00000553823 CHAC2Q8WUX2 184 aa9.57□□□□□ -0.88
NEK9-202ENST00000553823 TMEM186Q96B77 213 aa9.57□□□□□ -0.88
NEK9-202ENST00000553823 TP53RKQ96S44 253 aa9.57□□□□□ -0.88
NEK9-202ENST00000553823 TBX15Q96SF7 602 aa9.57□□□□□ -0.88
NEK9-202ENST00000553823 ZNF251Q9BRH9 671 aa9.57□□□□□ -0.88
NEK9-202ENST00000553823 TMEM222Q9H0R3 208 aa9.57□□□□□ -0.88
NEK9-202ENST00000553823 PRR13Q9NZ81 148 aa9.57□□□□□ -0.88
NEK9-202ENST00000553823 AMMECR1Q9Y4X0 333 aaPredicted RBP9.57□□□□□ -0.88
NEK9-202ENST00000553823 TLN2Q9Y4G6 2542 aa9.56□□□□□ -0.88
NEK9-202ENST00000553823 LINC00473A8K010 186 aa9.56□□□□□ -0.88
NEK9-202ENST00000553823 RNASEK-C17orf49H0YIS7 233 aa9.56□□□□□ -0.88
NEK9-202ENST00000553823 ARG1P05089 322 aa9.56□□□□□ -0.88
NEK9-202ENST00000553823 SULT1A3P0DMM9 295 aa9.56□□□□□ -0.88
NEK9-202ENST00000553823 SULT1A4P0DMN0 295 aa9.56□□□□□ -0.88
NEK9-202ENST00000553823 HOXB4P17483 251 aaPredicted RBP9.56□□□□□ -0.88
NEK9-202ENST00000553823 UCP1P25874 307 aa9.56□□□□□ -0.88
NEK9-202ENST00000553823 GZMKP49863 264 aa9.56□□□□□ -0.88
NEK9-202ENST00000553823 SRPXP78539 464 aa9.56□□□□□ -0.88
NEK9-202ENST00000553823 TMEM249Q2WGJ8 235 aa9.56□□□□□ -0.88
NEK9-202ENST00000553823 HCP5Q6MZN7 132 aa9.56□□□□□ -0.88
NEK9-202ENST00000553823 LIN54Q6MZP7 749 aa9.56□□□□□ -0.88
NEK9-202ENST00000553823 FAM71F2Q6NXP2 309 aa9.56□□□□□ -0.88
NEK9-202ENST00000553823 C1orf229Q6ZS94 237 aaPredicted RBP9.56□□□□□ -0.88
NEK9-202ENST00000553823 LGI3Q8N145 548 aa9.56□□□□□ -0.88
NEK9-202ENST00000553823 TCTEX1D1Q8N7M0 179 aa9.56□□□□□ -0.88
NEK9-202ENST00000553823 OR4P4Q8NGL7 312 aa9.56□□□□□ -0.88
NEK9-202ENST00000553823 TCTEX1D2Q8WW35 142 aa9.56□□□□□ -0.88
NEK9-202ENST00000553823 ST6GALNAC6Q969X2 333 aa9.56□□□□□ -0.88
NEK9-202ENST00000553823 MSI2Q96DH6 328 aaKnown RBP9.56□□□□□ -0.88
NEK9-202ENST00000553823 ADTRPQ96IZ2 230 aa9.56□□□□□ -0.88
NEK9-202ENST00000553823 HIF1ANQ9NWT6 349 aa9.56□□□□□ -0.88
NEK9-202ENST00000553823 MGAT4CQ9UBM8 478 aa9.56□□□□□ -0.88
NEK9-202ENST00000553823 BAHCC1Q9P281 2608 aa9.56□□□□□ -0.88
NEK9-202ENST00000553823 VPS13CQ709C8 3753 aa9.56□□□□□ -0.88
NEK9-202ENST00000553823 FLNAP21333 2647 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms