RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 NDUFAF3Q9BU61 184 aa4.22□□□□□ -1.73
ATXN3-223ENST00000553686 ABHD6Q9BV23 337 aa4.22□□□□□ -1.73
ATXN3-223ENST00000553686 OSBPL10Q9BXB5 764 aa4.22□□□□□ -1.73
ATXN3-223ENST00000553686 ANKRD60Q9BZ19 345 aa4.22□□□□□ -1.73
ATXN3-223ENST00000553686 HRH4Q9H3N8 390 aa4.22□□□□□ -1.73
ATXN3-223ENST00000553686 LINC00574Q9H8X3 128 aa4.22□□□□□ -1.73
ATXN3-223ENST00000553686 CALYQ9NYX4 217 aa4.22□□□□□ -1.73
ATXN3-223ENST00000553686 KLHDC2Q9Y2U9 406 aa4.22□□□□□ -1.73
ATXN3-223ENST00000553686 V9GYY5 206 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-223ENST00000553686 A0A087X002 238 aa4.21□□□□□ -1.74
ATXN3-223ENST00000553686 ZNF736B4DX44 427 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-223ENST00000553686 F8VVB4 439 aa4.21□□□□□ -1.74
ATXN3-223ENST00000553686 F8VWA3 439 aa4.21□□□□□ -1.74
ATXN3-223ENST00000553686 H3BUA1 57 aa4.21□□□□□ -1.74
ATXN3-223ENST00000553686 SIRPB1O00241 398 aa4.21□□□□□ -1.74
ATXN3-223ENST00000553686 FFAR1O14842 300 aa4.21□□□□□ -1.74
ATXN3-223ENST00000553686 CGB3P0DN86 165 aa4.21□□□□□ -1.74
ATXN3-223ENST00000553686 CGB7P0DN87 165 aa4.21□□□□□ -1.74
ATXN3-223ENST00000553686 OMPP47874 163 aa4.21□□□□□ -1.74
ATXN3-223ENST00000553686 MRPL19P49406 292 aaKnown RBP4.21□□□□□ -1.74
ATXN3-223ENST00000553686 SLC18A1P54219 525 aa4.21□□□□□ -1.74
ATXN3-223ENST00000553686 MTPNP58546 118 aa4.21□□□□□ -1.74
ATXN3-223ENST00000553686 ACTBP60709 375 aa4.21□□□□□ -1.74
ATXN3-223ENST00000553686 SNRPEP62304 92 aaKnown RBP4.21□□□□□ -1.74
ATXN3-223ENST00000553686 SELENOWP63302 87 aa4.21□□□□□ -1.74
ATXN3-223ENST00000553686 CX3CL1P78423 397 aa4.21□□□□□ -1.74
ATXN3-223ENST00000553686 PLA2G7Q13093 441 aa4.21□□□□□ -1.74
ATXN3-223ENST00000553686 LRRC36Q1X8D7 754 aa4.21□□□□□ -1.74
ATXN3-223ENST00000553686 ZFP69Q49AA0 526 aa4.21□□□□□ -1.74
ATXN3-223ENST00000553686 CYBRD1Q53TN4 286 aa4.21□□□□□ -1.74
ATXN3-223ENST00000553686 PPP1R27Q86WC6 154 aa4.21□□□□□ -1.74
ATXN3-223ENST00000553686 FUNDC1Q8IVP5 155 aa4.21□□□□□ -1.74
ATXN3-223ENST00000553686 IFT20Q8IY31 132 aa4.21□□□□□ -1.74
ATXN3-223ENST00000553686 SLC38A6Q8IZM9 456 aa4.21□□□□□ -1.74
ATXN3-223ENST00000553686 FAM58AQ8N1B3 248 aa4.21□□□□□ -1.74
ATXN3-223ENST00000553686 LINC00311Q8N616 119 aa4.21□□□□□ -1.74
ATXN3-223ENST00000553686 CHST4Q8NCG5 386 aa4.21□□□□□ -1.74
ATXN3-223ENST00000553686 OR51L1Q8NGJ5 315 aa4.21□□□□□ -1.74
ATXN3-223ENST00000553686 OR4A5Q8NH83 315 aa4.21□□□□□ -1.74
ATXN3-223ENST00000553686 RFESDQ8TAC1 157 aa4.21□□□□□ -1.74
ATXN3-223ENST00000553686 FANK1Q8TC84 345 aa4.21□□□□□ -1.74
ATXN3-223ENST00000553686 UBLCP1Q8WVY7 318 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-223ENST00000553686 SLAMF9Q96A28 289 aa4.21□□□□□ -1.74
ATXN3-223ENST00000553686 ASB9Q96DX5 294 aa4.21□□□□□ -1.74
ATXN3-223ENST00000553686 SH3GL1Q99961 368 aa4.21□□□□□ -1.74
ATXN3-223ENST00000553686 OR52D1Q9H346 318 aa4.21□□□□□ -1.74
ATXN3-223ENST00000553686 NCOR1P1Q9H4R4 102 aa4.21□□□□□ -1.74
ATXN3-223ENST00000553686 EXOSC4Q9NPD3 245 aaKnown RBP4.21□□□□□ -1.74
ATXN3-223ENST00000553686 GPR173Q9NS66 373 aa4.21□□□□□ -1.74
ATXN3-223ENST00000553686 CCDC167Q9P0B6 97 aa4.21□□□□□ -1.74
ATXN3-223ENST00000553686 MEIKINA0A087WXM9 373 aa4.2□□□□□ -1.74
ATXN3-223ENST00000553686 TRBV2A0A0J9YWF9 115 aa4.2□□□□□ -1.74
ATXN3-223ENST00000553686 A0A1W2PPE3 182 aa4.2□□□□□ -1.74
ATXN3-223ENST00000553686 FAM230AA0A1W2PPH8 454 aa4.2□□□□□ -1.74
ATXN3-223ENST00000553686 A0A1W2PRQ8 180 aa4.2□□□□□ -1.74
ATXN3-223ENST00000553686 PTGES3LE9PB15 166 aa4.2□□□□□ -1.74
ATXN3-223ENST00000553686 LOC110117498-PIK3R3F6TDL0 507 aa4.2□□□□□ -1.74
ATXN3-223ENST00000553686 NBR2O15453 112 aa4.2□□□□□ -1.74
ATXN3-223ENST00000553686 DHRS3O75911 302 aa4.2□□□□□ -1.74
ATXN3-223ENST00000553686 OR2H2O95918 312 aa4.2□□□□□ -1.74
ATXN3-223ENST00000553686 PSKH1P11801 424 aa4.2□□□□□ -1.74
ATXN3-223ENST00000553686 FOLR2P14207 255 aa4.2□□□□□ -1.74
ATXN3-223ENST00000553686 GZMHP20718 246 aa4.2□□□□□ -1.74
ATXN3-223ENST00000553686 KDELR2P33947 212 aa4.2□□□□□ -1.74
ATXN3-223ENST00000553686 GLP1RP43220 463 aa4.2□□□□□ -1.74
ATXN3-223ENST00000553686 DGCR6Q14129 220 aa4.2□□□□□ -1.74
ATXN3-223ENST00000553686 LTC4SQ16873 150 aa4.2□□□□□ -1.74
ATXN3-223ENST00000553686 ZNF57Q68EA5 555 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-223ENST00000553686 TMEM42Q69YG0 159 aa4.2□□□□□ -1.74
ATXN3-223ENST00000553686 ERICH5Q6P6B1 374 aa4.2□□□□□ -1.74
ATXN3-223ENST00000553686 SLC25A26Q70HW3 274 aa4.2□□□□□ -1.74
ATXN3-223ENST00000553686 C5orf24Q7Z6I8 188 aa4.2□□□□□ -1.74
ATXN3-223ENST00000553686 LINC00596Q86U02 117 aa4.2□□□□□ -1.74
ATXN3-223ENST00000553686 C8orf31Q8N9H6 132 aa4.2□□□□□ -1.74
ATXN3-223ENST00000553686 MNS1Q8NEH6 495 aa4.2□□□□□ -1.74
ATXN3-223ENST00000553686 OR6K6Q8NGW6 343 aa4.2□□□□□ -1.74
ATXN3-223ENST00000553686 OR6N2Q8NGY6 317 aa4.2□□□□□ -1.74
ATXN3-223ENST00000553686 OR11H2Q8NH07 326 aa4.2□□□□□ -1.74
ATXN3-223ENST00000553686 OR51E1Q8TCB6 317 aa4.2□□□□□ -1.74
ATXN3-223ENST00000553686 THRSPQ92748 146 aa4.2□□□□□ -1.74
ATXN3-223ENST00000553686 USMG5Q96IX5 58 aa4.2□□□□□ -1.74
ATXN3-223ENST00000553686 INTS14Q96SY0 518 aa4.2□□□□□ -1.74
ATXN3-223ENST00000553686 TXLNGYQ9BZA5 131 aa4.2□□□□□ -1.74
ATXN3-223ENST00000553686 C6orf62Q9GZU0 229 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-223ENST00000553686 RNF167Q9H6Y7 350 aa4.2□□□□□ -1.74
ATXN3-223ENST00000553686 RNF213Q63HN8 5207 aa4.19□□□□□ -1.74
ATXN3-223ENST00000553686 IGLV9-49A0A0B4J1Y8 123 aa4.19□□□□□ -1.74
ATXN3-223ENST00000553686 TRAV25A0A0B4J276 109 aa4.19□□□□□ -1.74
ATXN3-223ENST00000553686 TMEM269A0A1B0GVZ9 245 aa4.19□□□□□ -1.74
ATXN3-223ENST00000553686 MPTX1A8MV57 137 aa4.19□□□□□ -1.74
ATXN3-223ENST00000553686 ENTPD6O75354 484 aa4.19□□□□□ -1.74
ATXN3-223ENST00000553686 LYNP07948 512 aa4.19□□□□□ -1.74
ATXN3-223ENST00000553686 ZNF44P15621 663 aa4.19□□□□□ -1.74
ATXN3-223ENST00000553686 PRKACAP17612 351 aa4.19□□□□□ -1.74
ATXN3-223ENST00000553686 HLA-DMBP28068 263 aa4.19□□□□□ -1.74
ATXN3-223ENST00000553686 ALDH3A2P51648 485 aa4.19□□□□□ -1.74
ATXN3-223ENST00000553686 SCN1BQ07699 218 aa4.19□□□□□ -1.74
ATXN3-223ENST00000553686 PLGLAQ15195 96 aa4.19□□□□□ -1.74
ATXN3-223ENST00000553686 RNF212Q495C1 297 aa4.19□□□□□ -1.74
ATXN3-223ENST00000553686 LRRC23Q53EV4 343 aaPredicted RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms