RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 OR2V2Q96R30 315 aa13.16□□□□□ -0.3
ACTN1-209ENST00000553659 SSBP3Q9BWW4 388 aaPredicted RBP13.16□□□□□ -0.3
ACTN1-209ENST00000553659 GCM1Q9NP62 436 aa13.16□□□□□ -0.3
ACTN1-209ENST00000553659 OR2W1Q9Y3N9 320 aa13.16□□□□□ -0.3
ACTN1-209ENST00000553659 TMED3Q9Y3Q3 217 aa13.16□□□□□ -0.3
ACTN1-209ENST00000553659 OOEPA6NGQ2 149 aa13.15□□□□□ -0.3
ACTN1-209ENST00000553659 MPPED1O15442 326 aa13.15□□□□□ -0.3
ACTN1-209ENST00000553659 RLN2P04090 185 aa13.15□□□□□ -0.3
ACTN1-209ENST00000553659 IGHV4-38-2P0DP08 117 aa13.15□□□□□ -0.3
ACTN1-209ENST00000553659 AP2S1P53680 142 aaPredicted RBP13.15□□□□□ -0.3
ACTN1-209ENST00000553659 HERPUD1Q15011 391 aa13.15□□□□□ -0.3
ACTN1-209ENST00000553659 BTNL3Q6UXE8 466 aa13.15□□□□□ -0.3
ACTN1-209ENST00000553659 H1FOOQ8IZA3 346 aaPredicted RBP13.15□□□□□ -0.3
ACTN1-209ENST00000553659 LRRC29Q8WV35 223 aa13.15□□□□□ -0.3
ACTN1-209ENST00000553659 IL22RA2Q969J5 263 aa13.15□□□□□ -0.3
ACTN1-209ENST00000553659 SPIN2AQ99865 258 aa13.15□□□□□ -0.3
ACTN1-209ENST00000553659 SPIN2BQ9BPZ2 258 aa13.15□□□□□ -0.3
ACTN1-209ENST00000553659 SLC5A7Q9GZV3 580 aa13.15□□□□□ -0.3
ACTN1-209ENST00000553659 RDH8Q9NYR8 311 aa13.15□□□□□ -0.3
ACTN1-209ENST00000553659 DNAJB11Q9UBS4 358 aa13.15□□□□□ -0.3
ACTN1-209ENST00000553659 OR14J1Q9UGF5 321 aa13.15□□□□□ -0.3
ACTN1-209ENST00000553659 C3orf85A0A1B0GTC6 90 aa13.14□□□□□ -0.31
ACTN1-209ENST00000553659 BCL2L11O43521 198 aa13.14□□□□□ -0.31
ACTN1-209ENST00000553659 ADAP1O75689 374 aa13.14□□□□□ -0.31
ACTN1-209ENST00000553659 OR5AC1P0C628 307 aa13.14□□□□□ -0.31
ACTN1-209ENST00000553659 MSMO1Q15800 293 aa13.14□□□□□ -0.31
ACTN1-209ENST00000553659 LRRC37A5PQ49AS3 106 aa13.14□□□□□ -0.31
ACTN1-209ENST00000553659 PHLDA2Q53GA4 152 aa13.14□□□□□ -0.31
ACTN1-209ENST00000553659 CLLU1Q5K131 121 aa13.14□□□□□ -0.31
ACTN1-209ENST00000553659 LDLRAD3Q86YD5 345 aa13.14□□□□□ -0.31
ACTN1-209ENST00000553659 PLPPR1Q8TBJ4 325 aa13.14□□□□□ -0.31
ACTN1-209ENST00000553659 TAF15Q92804 592 aaKnown RBP eCLIP13.14□□□□□ -0.31
ACTN1-209ENST00000553659 RAB9BQ9NP90 201 aa13.14□□□□□ -0.31
ACTN1-209ENST00000553659 MIOXQ9UGB7 285 aa13.14□□□□□ -0.31
ACTN1-209ENST00000553659 SOX21Q9Y651 276 aaPredicted RBP13.14□□□□□ -0.31
ACTN1-209ENST00000553659 IGHV3OR16-10A0A075B7F0 116 aa13.13□□□□□ -0.31
ACTN1-209ENST00000553659 IGHV2-70DA0A0C4DH43 119 aa13.13□□□□□ -0.31
ACTN1-209ENST00000553659 IGKV1-6A0A0C4DH72 117 aa13.13□□□□□ -0.31
ACTN1-209ENST00000553659 A0A1B0GW55 424 aa13.13□□□□□ -0.31
ACTN1-209ENST00000553659 HOXB5P09067 269 aa13.13□□□□□ -0.31
ACTN1-209ENST00000553659 DUX4L2P0CJ85 424 aa13.13□□□□□ -0.31
ACTN1-209ENST00000553659 DUX4L3P0CJ86 424 aa13.13□□□□□ -0.31
ACTN1-209ENST00000553659 DUX4L4P0CJ87 422 aa13.13□□□□□ -0.31
ACTN1-209ENST00000553659 DUX4L5P0CJ88 424 aa13.13□□□□□ -0.31
ACTN1-209ENST00000553659 DUX4L6P0CJ89 424 aa13.13□□□□□ -0.31
ACTN1-209ENST00000553659 DUX4L7P0CJ90 424 aa13.13□□□□□ -0.31
ACTN1-209ENST00000553659 MDKP21741 143 aaPredicted RBP13.13□□□□□ -0.31
ACTN1-209ENST00000553659 GNRHRP30968 328 aa13.13□□□□□ -0.31
ACTN1-209ENST00000553659 LUMP51884 338 aaPredicted RBP13.13□□□□□ -0.31
ACTN1-209ENST00000553659 GNB2P62879 340 aa13.13□□□□□ -0.31
ACTN1-209ENST00000553659 EXOSC2Q13868 293 aaKnown RBP13.13□□□□□ -0.31
ACTN1-209ENST00000553659 IAH1Q2TAA2 248 aaPredicted RBP13.13□□□□□ -0.31
ACTN1-209ENST00000553659 ZBTB34Q8NCN2 500 aa13.13□□□□□ -0.31
ACTN1-209ENST00000553659 BVESQ8NE79 360 aa13.13□□□□□ -0.31
ACTN1-209ENST00000553659 OR10V1Q8NGI7 309 aa13.13□□□□□ -0.31
ACTN1-209ENST00000553659 OR11L1Q8NGX0 322 aa13.13□□□□□ -0.31
ACTN1-209ENST00000553659 Q8TCH9 128 aa13.13□□□□□ -0.31
ACTN1-209ENST00000553659 SECTM1Q8WVN6 248 aa13.13□□□□□ -0.31
ACTN1-209ENST00000553659 TOLLIPQ9H0E2 274 aa13.13□□□□□ -0.31
ACTN1-209ENST00000553659 DNTTIP1Q9H147 329 aa13.13□□□□□ -0.31
ACTN1-209ENST00000553659 NCOR1P1Q9H4R4 102 aa13.13□□□□□ -0.31
ACTN1-209ENST00000553659 UFSP2Q9NUQ7 469 aa13.13□□□□□ -0.31
ACTN1-209ENST00000553659 MBD2Q9UBB5 411 aa13.13□□□□□ -0.31
ACTN1-209ENST00000553659 DUX4Q9UBX2 424 aa13.13□□□□□ -0.31
ACTN1-209ENST00000553659 MMP24Q9Y5R2 645 aa13.13□□□□□ -0.31
ACTN1-209ENST00000553659 H0Y980 276 aa13.12□□□□□ -0.31
ACTN1-209ENST00000553659 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.12□□□□□ -0.31
ACTN1-209ENST00000553659 HSPA12AO43301 675 aa13.12□□□□□ -0.31
ACTN1-209ENST00000553659 ZNF205O95201 554 aa13.12□□□□□ -0.31
ACTN1-209ENST00000553659 FSTL3O95633 263 aa13.12□□□□□ -0.31
ACTN1-209ENST00000553659 CDS2O95674 445 aa13.12□□□□□ -0.31
ACTN1-209ENST00000553659 IL15RAQ13261 267 aa13.12□□□□□ -0.31
ACTN1-209ENST00000553659 ATXN7L3Q14CW9 347 aaPredicted RBP13.12□□□□□ -0.31
ACTN1-209ENST00000553659 GGNBP1Q5YKI7 109 aa13.12□□□□□ -0.31
ACTN1-209ENST00000553659 ZNF826PQ6ZT77 177 aa13.12□□□□□ -0.31
ACTN1-209ENST00000553659 TBC1D26Q86UD7 250 aa13.12□□□□□ -0.31
ACTN1-209ENST00000553659 SCARB1Q8WTV0 552 aa13.12□□□□□ -0.31
ACTN1-209ENST00000553659 DCUN1D4Q92564 292 aa13.12□□□□□ -0.31
ACTN1-209ENST00000553659 PHYHIPLQ96FC7 376 aa13.12□□□□□ -0.31
ACTN1-209ENST00000553659 NEIL1Q96FI4 390 aaPredicted RBP13.12□□□□□ -0.31
ACTN1-209ENST00000553659 ABHD14BQ96IU4 210 aa13.12□□□□□ -0.31
ACTN1-209ENST00000553659 SNX22Q96L94 193 aa13.12□□□□□ -0.31
ACTN1-209ENST00000553659 TMEM56Q96MV1 263 aa13.12□□□□□ -0.31
ACTN1-209ENST00000553659 TMEM222Q9H0R3 208 aa13.12□□□□□ -0.31
ACTN1-209ENST00000553659 PRDM13Q9H4Q3 707 aa13.12□□□□□ -0.31
ACTN1-209ENST00000553659 KIF25Q9UIL4 384 aa13.12□□□□□ -0.31
ACTN1-209ENST00000553659 UBE2J1Q9Y385 318 aaPredicted RBP13.12□□□□□ -0.31
ACTN1-209ENST00000553659 TMEM56-RWDD3S4R434 201 aa13.12□□□□□ -0.31
ACTN1-209ENST00000553659 TRRAPQ9Y4A5 3859 aa13.12□□□□□ -0.31
ACTN1-209ENST00000553659 TRAV40A0A0B4J280 105 aa13.11□□□□□ -0.31
ACTN1-209ENST00000553659 CYB5R3P00387 301 aaPredicted RBP13.11□□□□□ -0.31
ACTN1-209ENST00000553659 RCC1P18754 421 aaPredicted RBP13.11□□□□□ -0.31
ACTN1-209ENST00000553659 OMGP23515 440 aa13.11□□□□□ -0.31
ACTN1-209ENST00000553659 PRDX2P32119 198 aa13.11□□□□□ -0.31
ACTN1-209ENST00000553659 EIF5AP63241 154 aaKnown RBP13.11□□□□□ -0.31
ACTN1-209ENST00000553659 COL10A1Q03692 680 aa13.11□□□□□ -0.31
ACTN1-209ENST00000553659 OR8H3Q8N146 312 aa13.11□□□□□ -0.31
ACTN1-209ENST00000553659 GALMQ96C23 342 aa13.11□□□□□ -0.31
ACTN1-209ENST00000553659 OR10C1Q96KK4 312 aa13.11□□□□□ -0.31
ACTN1-209ENST00000553659 AQP10Q96PS8 301 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms