RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 STPG2Q8N412 459 aa6.06□□□□□ -1.44
ATXN3-221ENST00000553498 FGFRL1Q8N441 504 aa6.06□□□□□ -1.44
ATXN3-221ENST00000553498 C8orf31Q8N9H6 132 aa6.06□□□□□ -1.44
ATXN3-221ENST00000553498 BOLLQ8N9W6 283 aaKnown RBP6.06□□□□□ -1.44
ATXN3-221ENST00000553498 DMBX1Q8NFW5 382 aa6.06□□□□□ -1.44
ATXN3-221ENST00000553498 OR52L2PQ8NGH6 319 aa6.06□□□□□ -1.44
ATXN3-221ENST00000553498 GPR146Q96CH1 333 aa6.06□□□□□ -1.44
ATXN3-221ENST00000553498 GNPNAT1Q96EK6 184 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-221ENST00000553498 GAFA1Q96PS6 74 aa6.06□□□□□ -1.44
ATXN3-221ENST00000553498 CIB3Q96Q77 187 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-221ENST00000553498 AIFM2Q9BRQ8 373 aa6.06□□□□□ -1.44
ATXN3-221ENST00000553498 GINS3Q9BRX5 216 aa6.06□□□□□ -1.44
ATXN3-221ENST00000553498 TMEM204Q9BSN7 226 aa6.06□□□□□ -1.44
ATXN3-221ENST00000553498 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-221ENST00000553498 TMEM106BQ9NUM4 274 aa6.06□□□□□ -1.44
ATXN3-221ENST00000553498 GFOD1Q9NXC2 390 aa6.06□□□□□ -1.44
ATXN3-221ENST00000553498 FBXL17Q9UF56 701 aa6.06□□□□□ -1.44
ATXN3-221ENST00000553498 RCL1Q9Y2P8 373 aaKnown RBP6.06□□□□□ -1.44
ATXN3-221ENST00000553498 PRELID3BQ9Y3B1 194 aa6.06□□□□□ -1.44
ATXN3-221ENST00000553498 STRAPQ9Y3F4 350 aaKnown RBP6.06□□□□□ -1.44
ATXN3-221ENST00000553498 ASPMQ8IZT6 3477 aa6.06□□□□□ -1.44
ATXN3-221ENST00000553498 FRYQ5TBA9 3013 aa6.06□□□□□ -1.44
ATXN3-221ENST00000553498 IGHV3OR15-7A0A075B7D8 119 aa6.05□□□□□ -1.44
ATXN3-221ENST00000553498 TRBV23-1A0A0A0MS06 115 aa6.05□□□□□ -1.44
ATXN3-221ENST00000553498 TRAV39A0A0B4J263 110 aa6.05□□□□□ -1.44
ATXN3-221ENST00000553498 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-221ENST00000553498 UMAD1C9J7I0 102 aa6.05□□□□□ -1.44
ATXN3-221ENST00000553498 E7EQL1 145 aa6.05□□□□□ -1.44
ATXN3-221ENST00000553498 TRIM77I1YAP6 450 aa6.05□□□□□ -1.44
ATXN3-221ENST00000553498 RAB29O14966 203 aa6.05□□□□□ -1.44
ATXN3-221ENST00000553498 SHOXO15266 292 aa6.05□□□□□ -1.44
ATXN3-221ENST00000553498 SYNGR2O43760 224 aa6.05□□□□□ -1.44
ATXN3-221ENST00000553498 ZG16O60844 167 aa6.05□□□□□ -1.44
ATXN3-221ENST00000553498 GOSR1O95249 250 aa6.05□□□□□ -1.44
ATXN3-221ENST00000553498 CYB5R3P00387 301 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-221ENST00000553498 HPRT1P00492 218 aa6.05□□□□□ -1.44
ATXN3-221ENST00000553498 C1QTNF9P0C862 333 aa6.05□□□□□ -1.44
ATXN3-221ENST00000553498 ZP3P21754 424 aa6.05□□□□□ -1.44
ATXN3-221ENST00000553498 CD80P33681 288 aa6.05□□□□□ -1.44
ATXN3-221ENST00000553498 PPP1CCP36873 323 aaKnown RBP6.05□□□□□ -1.44
ATXN3-221ENST00000553498 LPAR6P43657 344 aa6.05□□□□□ -1.44
ATXN3-221ENST00000553498 GPR12P47775 334 aa6.05□□□□□ -1.44
ATXN3-221ENST00000553498 SULT1A2P50226 295 aa6.05□□□□□ -1.44
ATXN3-221ENST00000553498 PPOXP50336 477 aa6.05□□□□□ -1.44
ATXN3-221ENST00000553498 CAV2P51636 162 aa6.05□□□□□ -1.44
ATXN3-221ENST00000553498 LOXL3P58215 753 aa6.05□□□□□ -1.44
ATXN3-221ENST00000553498 POLR2GP62487 172 aaKnown RBP eCLIP6.05□□□□□ -1.44
ATXN3-221ENST00000553498 CCL8P80075 99 aa6.05□□□□□ -1.44
ATXN3-221ENST00000553498 ZNF672Q499Z4 452 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-221ENST00000553498 AARDQ4LEZ3 155 aa6.05□□□□□ -1.44
ATXN3-221ENST00000553498 LRRC10Q5BKY1 277 aa6.05□□□□□ -1.44
ATXN3-221ENST00000553498 CCDC28AQ8IWP9 274 aa6.05□□□□□ -1.44
ATXN3-221ENST00000553498 SPAG16Q8N0X2 631 aa6.05□□□□□ -1.44
ATXN3-221ENST00000553498 COMMD1Q8N668 190 aa6.05□□□□□ -1.44
ATXN3-221ENST00000553498 TMEM252Q8N6L7 170 aa6.05□□□□□ -1.44
ATXN3-221ENST00000553498 ZNRF1Q8ND25 227 aa6.05□□□□□ -1.44
ATXN3-221ENST00000553498 TCTEX1D2Q8WW35 142 aa6.05□□□□□ -1.44
ATXN3-221ENST00000553498 MARC2Q969Z3 335 aa6.05□□□□□ -1.44
ATXN3-221ENST00000553498 SMIM8Q96KF7 97 aa6.05□□□□□ -1.44
ATXN3-221ENST00000553498 BARX1Q9HBU1 254 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-221ENST00000553498 PARP11Q9NR21 331 aa6.05□□□□□ -1.44
ATXN3-221ENST00000553498 IDI2-AS1Q9NZ38 188 aa6.05□□□□□ -1.44
ATXN3-221ENST00000553498 IGHV1-69-2A0A0G2JMI3 117 aa6.04□□□□□ -1.44
ATXN3-221ENST00000553498 A0A1W2PPH5 198 aa6.04□□□□□ -1.44
ATXN3-221ENST00000553498 FAM90A27PA6NNH2 459 aa6.04□□□□□ -1.44
ATXN3-221ENST00000553498 I3L521 148 aa6.04□□□□□ -1.44
ATXN3-221ENST00000553498 TNFRSF13BO14836 293 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-221ENST00000553498 NDUFB3O43676 98 aa6.04□□□□□ -1.44
ATXN3-221ENST00000553498 CHST1O43916 411 aa6.04□□□□□ -1.44
ATXN3-221ENST00000553498 SSSCA1O60232 199 aa6.04□□□□□ -1.44
ATXN3-221ENST00000553498 SOX15O60248 233 aa6.04□□□□□ -1.44
ATXN3-221ENST00000553498 IGKV1-39P01597 117 aa6.04□□□□□ -1.44
ATXN3-221ENST00000553498 IGKV1-5P01602 117 aa6.04□□□□□ -1.44
ATXN3-221ENST00000553498 IGKV1D-39P04432 117 aa6.04□□□□□ -1.44
ATXN3-221ENST00000553498 P0C879 139 aa6.04□□□□□ -1.44
ATXN3-221ENST00000553498 FAM157CP0CG43 387 aa6.04□□□□□ -1.44
ATXN3-221ENST00000553498 SPP1P10451 314 aa6.04□□□□□ -1.44
ATXN3-221ENST00000553498 DAOP14920 347 aa6.04□□□□□ -1.44
ATXN3-221ENST00000553498 DUTP33316 252 aaKnown RBP6.04□□□□□ -1.44
ATXN3-221ENST00000553498 THBS3P49746 956 aa6.04□□□□□ -1.44
ATXN3-221ENST00000553498 SULT1A1P50225 295 aa6.04□□□□□ -1.44
ATXN3-221ENST00000553498 F2RL1P55085 397 aa6.04□□□□□ -1.44
ATXN3-221ENST00000553498 HBG1P69891 147 aa6.04□□□□□ -1.44
ATXN3-221ENST00000553498 HBG2P69892 147 aa6.04□□□□□ -1.44
ATXN3-221ENST00000553498 ADORA2A-AS1P86434 159 aa6.04□□□□□ -1.44
ATXN3-221ENST00000553498 C17orf58Q2M2W7 97 aa6.04□□□□□ -1.44
ATXN3-221ENST00000553498 HFEQ30201 348 aa6.04□□□□□ -1.44
ATXN3-221ENST00000553498 PDLIM3Q53GG5 364 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-221ENST00000553498 CXorf66Q5JRM2 361 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-221ENST00000553498 TOR2AQ5JU69 321 aa6.04□□□□□ -1.44
ATXN3-221ENST00000553498 RPL7L1Q6DKI1 246 aaKnown RBP6.04□□□□□ -1.44
ATXN3-221ENST00000553498 DHRS7BQ6IAN0 325 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-221ENST00000553498 FAM71F2Q6NXP2 309 aa6.04□□□□□ -1.44
ATXN3-221ENST00000553498 DPPA3Q6W0C5 159 aa6.04□□□□□ -1.44
ATXN3-221ENST00000553498 C5orf24Q7Z6I8 188 aa6.04□□□□□ -1.44
ATXN3-221ENST00000553498 MUC15Q8N387 334 aa6.04□□□□□ -1.44
ATXN3-221ENST00000553498 TMED6Q8WW62 240 aa6.04□□□□□ -1.44
ATXN3-221ENST00000553498 CCL13Q99616 98 aa6.04□□□□□ -1.44
ATXN3-221ENST00000553498 ABHD14AQ9BUJ0 271 aa6.04□□□□□ -1.44
ATXN3-221ENST00000553498 PARD6GQ9BYG4 376 aaPredicted RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms