RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 IGKV3-11P04433 115 aa9.94□□□□□ -0.82
SYNE2-208ENST00000553289 HOXA4Q00056 320 aaPredicted RBP9.94□□□□□ -0.82
SYNE2-208ENST00000553289 FGFRL1Q8N441 504 aa9.94□□□□□ -0.82
SYNE2-208ENST00000553289 OPN3Q9H1Y3 402 aaPredicted RBP9.94□□□□□ -0.82
SYNE2-208ENST00000553289 ZNF430Q9H8G1 570 aaPredicted RBP9.94□□□□□ -0.82
SYNE2-208ENST00000553289 ASCC3Q8N3C0 2202 aaKnown RBP9.94□□□□□ -0.82
SYNE2-208ENST00000553289 TRIP12Q14669 1992 aaPredicted RBP9.93□□□□□ -0.82
SYNE2-208ENST00000553289 CCL8P80075 99 aa9.93□□□□□ -0.82
SYNE2-208ENST00000553289 ZNF273Q14593 569 aa9.93□□□□□ -0.82
SYNE2-208ENST00000553289 PCOLCEQ15113 449 aa9.93□□□□□ -0.82
SYNE2-208ENST00000553289 ZNF658BQ4V348 819 aaPredicted RBP9.93□□□□□ -0.82
SYNE2-208ENST00000553289 STPG1Q5TH74 334 aa9.93□□□□□ -0.82
SYNE2-208ENST00000553289 STPG3Q8N7X2 389 aa9.93□□□□□ -0.82
SYNE2-208ENST00000553289 PRR7Q8TB68 274 aa9.93□□□□□ -0.82
SYNE2-208ENST00000553289 ITLN1Q8WWA0 313 aa9.93□□□□□ -0.82
SYNE2-208ENST00000553289 MARVELD3Q96A59 401 aa9.93□□□□□ -0.82
SYNE2-208ENST00000553289 GPR146Q96CH1 333 aa9.93□□□□□ -0.82
SYNE2-208ENST00000553289 LINC00470Q9BZP3 86 aa9.93□□□□□ -0.82
SYNE2-208ENST00000553289 AP5S1Q9NUS5 200 aa9.93□□□□□ -0.82
SYNE2-208ENST00000553289 RGPD3A6NKT7 1758 aaPredicted RBP9.93□□□□□ -0.82
SYNE2-208ENST00000553289 HLA-DQA1P01909 254 aa9.93□□□□□ -0.82
SYNE2-208ENST00000553289 RPLP1P05386 114 aaKnown RBP9.93□□□□□ -0.82
SYNE2-208ENST00000553289 FAM106CPP0CH98 169 aa9.93□□□□□ -0.82
SYNE2-208ENST00000553289 ECSCRQ19T08 205 aa9.93□□□□□ -0.82
SYNE2-208ENST00000553289 OR4A5Q8NH83 315 aa9.93□□□□□ -0.82
SYNE2-208ENST00000553289 RSG1Q9BU20 258 aa9.93□□□□□ -0.82
SYNE2-208ENST00000553289 CISD1Q9NZ45 108 aaKnown RBP9.93□□□□□ -0.82
SYNE2-208ENST00000553289 SCN4AP35499 1836 aa9.93□□□□□ -0.82
SYNE2-208ENST00000553289 LINC00869P0C866 280 aa9.93□□□□□ -0.82
SYNE2-208ENST00000553289 PSMB2P49721 201 aa9.93□□□□□ -0.82
SYNE2-208ENST00000553289 MFAP2P55001 183 aa9.93□□□□□ -0.82
SYNE2-208ENST00000553289 HSPE1P61604 102 aaKnown RBP9.93□□□□□ -0.82
SYNE2-208ENST00000553289 SNAI3Q3KNW1 292 aa9.93□□□□□ -0.82
SYNE2-208ENST00000553289 TEX29Q8N6K0 151 aa9.93□□□□□ -0.82
SYNE2-208ENST00000553289 CALYQ9NYX4 217 aa9.93□□□□□ -0.82
SYNE2-208ENST00000553289 SCN3AQ9NY46 2000 aa9.93□□□□□ -0.82
SYNE2-208ENST00000553289 TRAV30A0A087WSZ9 112 aa9.93□□□□□ -0.82
SYNE2-208ENST00000553289 A0A1W2PPE3 182 aa9.93□□□□□ -0.82
SYNE2-208ENST00000553289 A0A1W2PS18 150 aa9.93□□□□□ -0.82
SYNE2-208ENST00000553289 DLX1P56177 255 aa9.93□□□□□ -0.82
SYNE2-208ENST00000553289 SPANXN1Q5VSR9 72 aa9.93□□□□□ -0.82
SYNE2-208ENST00000553289 SMIM8Q96KF7 97 aa9.93□□□□□ -0.82
SYNE2-208ENST00000553289 C5orf66Q9H5L9 145 aa9.93□□□□□ -0.82
SYNE2-208ENST00000553289 WNK3Q9BYP7 1800 aa9.93□□□□□ -0.82
SYNE2-208ENST00000553289 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.92□□□□□ -0.82
SYNE2-208ENST00000553289 KLF4O43474 513 aa9.92□□□□□ -0.82
SYNE2-208ENST00000553289 FTH1P19P0C7X4 201 aa9.92□□□□□ -0.82
SYNE2-208ENST00000553289 REG1BP48304 166 aa9.92□□□□□ -0.82
SYNE2-208ENST00000553289 PRNTQ86SH4 94 aa9.92□□□□□ -0.82
SYNE2-208ENST00000553289 RBM14Q96PK6 669 aaKnown RBP9.92□□□□□ -0.82
SYNE2-208ENST00000553289 TMEM189A5PLL7 270 aa9.92□□□□□ -0.82
SYNE2-208ENST00000553289 IFITM10A6NMD0 228 aa9.92□□□□□ -0.82
SYNE2-208ENST00000553289 DIRC3C9JPN6 131 aa9.92□□□□□ -0.82
SYNE2-208ENST00000553289 RHBDL1O75783 438 aa9.92□□□□□ -0.82
SYNE2-208ENST00000553289 OR2A4O95047 310 aa9.92□□□□□ -0.82
SYNE2-208ENST00000553289 CD40P25942 277 aa9.92□□□□□ -0.82
SYNE2-208ENST00000553289 GUCA2BQ16661 112 aa9.92□□□□□ -0.82
SYNE2-208ENST00000553289 IBA57Q5T440 356 aaKnown RBP9.92□□□□□ -0.82
SYNE2-208ENST00000553289 TMEM45BQ96B21 275 aa9.92□□□□□ -0.82
SYNE2-208ENST00000553289 OR2A7Q96R45 310 aa9.92□□□□□ -0.82
SYNE2-208ENST00000553289 NDUFB4O95168 129 aa9.92□□□□□ -0.82
SYNE2-208ENST00000553289 ADRA2AP08913 450 aa9.92□□□□□ -0.82
SYNE2-208ENST00000553289 KIR2DL2P43627 348 aaPredicted RBP9.92□□□□□ -0.82
SYNE2-208ENST00000553289 TNFRSF9Q07011 255 aa9.92□□□□□ -0.82
SYNE2-208ENST00000553289 CXorf66Q5JRM2 361 aaPredicted RBP9.92□□□□□ -0.82
SYNE2-208ENST00000553289 LAIR2Q6ISS4 152 aa9.92□□□□□ -0.82
SYNE2-208ENST00000553289 SPRED2Q7Z698 418 aa9.92□□□□□ -0.82
SYNE2-208ENST00000553289 WNT5BQ9H1J7 359 aa9.92□□□□□ -0.82
SYNE2-208ENST00000553289 A0A1W2PR77 199 aa9.92□□□□□ -0.82
SYNE2-208ENST00000553289 GCGP01275 180 aa9.92□□□□□ -0.82
SYNE2-208ENST00000553289 MGPP08493 103 aa9.92□□□□□ -0.82
SYNE2-208ENST00000553289 SLC35E4Q6ICL7 350 aa9.92□□□□□ -0.82
SYNE2-208ENST00000553289 PUSL1Q8N0Z8 303 aaKnown RBP9.92□□□□□ -0.82
SYNE2-208ENST00000553289 DYNLRB2Q8TF09 96 aa9.92□□□□□ -0.82
SYNE2-208ENST00000553289 COL25A1Q9BXS0 654 aaPredicted RBP9.92□□□□□ -0.82
SYNE2-208ENST00000553289 C5orf52A6NGY3 159 aa9.91□□□□□ -0.82
SYNE2-208ENST00000553289 ZNF98A6NK75 572 aa9.91□□□□□ -0.82
SYNE2-208ENST00000553289 ZNF729A6NN14 1252 aaPredicted RBP9.91□□□□□ -0.82
SYNE2-208ENST00000553289 LMX1BO60663 402 aa9.91□□□□□ -0.82
SYNE2-208ENST00000553289 ACAA1P09110 424 aaPredicted RBP9.91□□□□□ -0.82
SYNE2-208ENST00000553289 ID4P47928 161 aa9.91□□□□□ -0.82
SYNE2-208ENST00000553289 SUCLG1P53597 346 aaKnown RBP9.91□□□□□ -0.82
SYNE2-208ENST00000553289 TMEM78Q5T7P6 136 aa9.91□□□□□ -0.82
SYNE2-208ENST00000553289 TPRX1Q8N7U7 411 aa9.91□□□□□ -0.82
SYNE2-208ENST00000553289 RABAC1Q9UI14 185 aa9.91□□□□□ -0.82
SYNE2-208ENST00000553289 BRWD1Q9NSI6 2320 aa9.91□□□□□ -0.82
SYNE2-208ENST00000553289 ANKRD31Q8N7Z5 1873 aa9.91□□□□□ -0.82
SYNE2-208ENST00000553289 CD8AP01732 235 aa9.91□□□□□ -0.82
SYNE2-208ENST00000553289 RPS20P60866 119 aaKnown RBP9.91□□□□□ -0.82
SYNE2-208ENST00000553289 FAM216AQ8WUB2 273 aa9.91□□□□□ -0.82
SYNE2-208ENST00000553289 METTL1Q9UBP6 276 aaKnown RBP9.91□□□□□ -0.82
SYNE2-208ENST00000553289 FOXL2P58012 376 aa9.91□□□□□ -0.82
SYNE2-208ENST00000553289 SRSF9Q13242 221 aaKnown RBP eCLIP9.91□□□□□ -0.82
SYNE2-208ENST00000553289 TMEM187Q14656 261 aa9.91□□□□□ -0.82
SYNE2-208ENST00000553289 TMEM140Q9NV12 185 aa9.91□□□□□ -0.82
SYNE2-208ENST00000553289 IL36RNQ9UBH0 155 aa9.91□□□□□ -0.82
SYNE2-208ENST00000553289 RP1L1Q8IWN7 2480 aaPredicted RBP9.91□□□□□ -0.82
SYNE2-208ENST00000553289 TNS1Q9HBL0 1735 aaKnown RBP9.91□□□□□ -0.82
SYNE2-208ENST00000553289 ZXDCQ2QGD7 858 aaPredicted RBP9.91□□□□□ -0.82
SYNE2-208ENST00000553289 OR8A1Q8NGG7 326 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms