RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 KRTAP11-1Q8IUC1 163 aa3.48□□□□□ -1.85
SCFD1-208ENST00000553278 BAP18Q8IXM2 172 aa3.48□□□□□ -1.85
SCFD1-208ENST00000553278 RPRMLQ8N4K4 120 aa3.48□□□□□ -1.85
SCFD1-208ENST00000553278 ZNF615Q8N8J6 731 aa3.48□□□□□ -1.85
SCFD1-208ENST00000553278 BPIFB6Q8NFQ5 453 aa3.48□□□□□ -1.85
SCFD1-208ENST00000553278 HIST1H2BAQ96A08 127 aa3.48□□□□□ -1.85
SCFD1-208ENST00000553278 ZNF285Q96NJ3 590 aa3.48□□□□□ -1.85
SCFD1-208ENST00000553278 TBX5Q99593 518 aa3.48□□□□□ -1.85
SCFD1-208ENST00000553278 FAM96AQ9H5X1 160 aa3.48□□□□□ -1.85
SCFD1-208ENST00000553278 TAS2R1Q9NYW7 299 aa3.48□□□□□ -1.85
SCFD1-208ENST00000553278 SAMHD1Q9Y3Z3 626 aaKnown RBP3.48□□□□□ -1.85
SCFD1-208ENST00000553278 NAV1Q8NEY1 1877 aa3.47□□□□□ -1.85
SCFD1-208ENST00000553278 TRBV24-1A0A075B6N3 115 aa3.47□□□□□ -1.85
SCFD1-208ENST00000553278 IGKV1OR2-108A0A075B7D4 117 aa3.47□□□□□ -1.85
SCFD1-208ENST00000553278 TMEM150BA6NC51 233 aa3.47□□□□□ -1.85
SCFD1-208ENST00000553278 EEF1E1-BLOC1S5C9J1V9 151 aa3.47□□□□□ -1.85
SCFD1-208ENST00000553278 H3BMM0 161 aa3.47□□□□□ -1.85
SCFD1-208ENST00000553278 FSTL3O95633 263 aa3.47□□□□□ -1.85
SCFD1-208ENST00000553278 CD7P09564 240 aa3.47□□□□□ -1.85
SCFD1-208ENST00000553278 ATP6V0CP27449 155 aa3.47□□□□□ -1.85
SCFD1-208ENST00000553278 GDI2P50395 445 aaKnown RBP3.47□□□□□ -1.85
SCFD1-208ENST00000553278 BTN3A2P78410 334 aa3.47□□□□□ -1.85
SCFD1-208ENST00000553278 EIF4EBP1Q13541 118 aaPredicted RBP3.47□□□□□ -1.85
SCFD1-208ENST00000553278 PMAIP1Q13794 54 aa3.47□□□□□ -1.85
SCFD1-208ENST00000553278 EBI3Q14213 229 aa3.47□□□□□ -1.85
SCFD1-208ENST00000553278 TMEM97Q5BJF2 176 aa3.47□□□□□ -1.85
SCFD1-208ENST00000553278 TMEM69Q5SWH9 247 aa3.47□□□□□ -1.85
SCFD1-208ENST00000553278 FAM201AQ5SY85 155 aa3.47□□□□□ -1.85
SCFD1-208ENST00000553278 Q6ZQT7 251 aa3.47□□□□□ -1.85
SCFD1-208ENST00000553278 LYZL2Q7Z4W2 148 aa3.47□□□□□ -1.85
SCFD1-208ENST00000553278 LRP11Q86VZ4 500 aa3.47□□□□□ -1.85
SCFD1-208ENST00000553278 DEFB125Q8N687 156 aa3.47□□□□□ -1.85
SCFD1-208ENST00000553278 LY6G5BQ8NDX9 201 aa3.47□□□□□ -1.85
SCFD1-208ENST00000553278 UBE2WQ96B02 151 aa3.47□□□□□ -1.85
SCFD1-208ENST00000553278 SLC25A44Q96H78 314 aaPredicted RBP3.47□□□□□ -1.85
SCFD1-208ENST00000553278 CEP19Q96LK0 163 aa3.47□□□□□ -1.85
SCFD1-208ENST00000553278 ARL5AQ9Y689 179 aa3.47□□□□□ -1.85
SCFD1-208ENST00000553278 PXMP4Q9Y6I8 212 aa3.47□□□□□ -1.85
SCFD1-208ENST00000553278 SCN4AP35499 1836 aa3.47□□□□□ -1.85
SCFD1-208ENST00000553278 YEATS2Q9ULM3 1422 aa3.46□□□□□ -1.86
SCFD1-208ENST00000553278 IGKV2-28A0A075B6P5 120 aa3.46□□□□□ -1.86
SCFD1-208ENST00000553278 TMED7-TICAM2A0A0A6YYA0 188 aa3.46□□□□□ -1.86
SCFD1-208ENST00000553278 A0A0B4J2C4 111 aa3.46□□□□□ -1.86
SCFD1-208ENST00000553278 A8MUU9 505 aa3.46□□□□□ -1.86
SCFD1-208ENST00000553278 E5RI56 91 aa3.46□□□□□ -1.86
SCFD1-208ENST00000553278 PSMD12O00232 456 aaPredicted RBP3.46□□□□□ -1.86
SCFD1-208ENST00000553278 SH2D1AO60880 128 aa3.46□□□□□ -1.86
SCFD1-208ENST00000553278 CNIH1O95406 144 aa3.46□□□□□ -1.86
SCFD1-208ENST00000553278 IGKV2D-28P01615 120 aa3.46□□□□□ -1.86
SCFD1-208ENST00000553278 HLA-DQB2P05538 268 aa3.46□□□□□ -1.86
SCFD1-208ENST00000553278 ZNF32P17041 273 aa3.46□□□□□ -1.86
SCFD1-208ENST00000553278 MAGEA12P43365 314 aa3.46□□□□□ -1.86
SCFD1-208ENST00000553278 DAPP51397 102 aa3.46□□□□□ -1.86
SCFD1-208ENST00000553278 PSME3P61289 254 aa3.46□□□□□ -1.86
SCFD1-208ENST00000553278 FGF12P61328 243 aa3.46□□□□□ -1.86
SCFD1-208ENST00000553278 PLPPR5Q32ZL2 321 aa3.46□□□□□ -1.86
SCFD1-208ENST00000553278 ACOT6Q3I5F7 207 aaPredicted RBP3.46□□□□□ -1.86
SCFD1-208ENST00000553278 C10orf91Q5T1B1 145 aa3.46□□□□□ -1.86
SCFD1-208ENST00000553278 ZFAND6Q6FIF0 208 aa3.46□□□□□ -1.86
SCFD1-208ENST00000553278 KRTAP5-4Q6L8H1 288 aa3.46□□□□□ -1.86
SCFD1-208ENST00000553278 OR6V1Q8N148 313 aa3.46□□□□□ -1.86
SCFD1-208ENST00000553278 OR2T27Q8NH04 317 aa3.46□□□□□ -1.86
SCFD1-208ENST00000553278 CPNE2Q96FN4 548 aaPredicted RBP3.46□□□□□ -1.86
SCFD1-208ENST00000553278 SCRT1Q9BWW7 348 aa3.46□□□□□ -1.86
SCFD1-208ENST00000553278 C1QTNF6Q9BXI9 259 aa3.46□□□□□ -1.86
SCFD1-208ENST00000553278 TRIM4Q9C037 500 aa3.46□□□□□ -1.86
SCFD1-208ENST00000553278 SLC23A2Q9UGH3 650 aa3.46□□□□□ -1.86
SCFD1-208ENST00000553278 ATPIF1Q9UII2 106 aa3.46□□□□□ -1.86
SCFD1-208ENST00000553278 OR51B4Q9Y5P0 310 aa3.46□□□□□ -1.86
SCFD1-208ENST00000553278 THADAQ6YHU6 1953 aa3.45□□□□□ -1.86
SCFD1-208ENST00000553278 COL16A1Q07092 1604 aaPredicted RBP3.45□□□□□ -1.86
SCFD1-208ENST00000553278 COLCA2A8K830 154 aa3.45□□□□□ -1.86
SCFD1-208ENST00000553278 H3BQ85 93 aa3.45□□□□□ -1.86
SCFD1-208ENST00000553278 RPL36A-HNRNPH2H7BZ11 118 aa3.45□□□□□ -1.86
SCFD1-208ENST00000553278 APOMO95445 188 aa3.45□□□□□ -1.86
SCFD1-208ENST00000553278 HAND1O96004 215 aa3.45□□□□□ -1.86
SCFD1-208ENST00000553278 PRPS1L1P21108 318 aa3.45□□□□□ -1.86
SCFD1-208ENST00000553278 SERPINB9P50453 376 aa3.45□□□□□ -1.86
SCFD1-208ENST00000553278 HOXC5Q00444 222 aa3.45□□□□□ -1.86
SCFD1-208ENST00000553278 BIKQ13323 160 aa3.45□□□□□ -1.86
SCFD1-208ENST00000553278 OR8G1Q15617 311 aa3.45□□□□□ -1.86
SCFD1-208ENST00000553278 LCE3CQ5T5A8 94 aa3.45□□□□□ -1.86
SCFD1-208ENST00000553278 SPINT4Q6UDR6 99 aa3.45□□□□□ -1.86
SCFD1-208ENST00000553278 ADM2Q7Z4H4 148 aa3.45□□□□□ -1.86
SCFD1-208ENST00000553278 C1orf174Q8IYL3 243 aa3.45□□□□□ -1.86
SCFD1-208ENST00000553278 OR5P3Q8WZ94 311 aa3.45□□□□□ -1.86
SCFD1-208ENST00000553278 BTF3L4Q96K17 158 aa3.45□□□□□ -1.86
SCFD1-208ENST00000553278 VCX3BQ9H321 246 aa3.45□□□□□ -1.86
SCFD1-208ENST00000553278 DOK5Q9P104 306 aa3.45□□□□□ -1.86
SCFD1-208ENST00000553278 CARHSP1Q9Y2V2 147 aaKnown RBP3.45□□□□□ -1.86
SCFD1-208ENST00000553278 LINC00588Q9Y4M8 146 aa3.45□□□□□ -1.86
SCFD1-208ENST00000553278 MMACHCQ9Y4U1 282 aa3.45□□□□□ -1.86
SCFD1-208ENST00000553278 THSD7AQ9UPZ6 1657 aa3.45□□□□□ -1.86
SCFD1-208ENST00000553278 NCOA1Q15788 1441 aa3.44□□□□□ -1.86
SCFD1-208ENST00000553278 CEP170Q5SW79 1584 aa3.44□□□□□ -1.86
SCFD1-208ENST00000553278 PQLC2LA1A4F0 135 aa3.44□□□□□ -1.86
SCFD1-208ENST00000553278 IGHV3-53P01767 116 aa3.44□□□□□ -1.86
SCFD1-208ENST00000553278 PFN1P07737 140 aaKnown RBP3.44□□□□□ -1.86
SCFD1-208ENST00000553278 CCL1P22362 96 aa3.44□□□□□ -1.86
SCFD1-208ENST00000553278 TAS2R45P59539 299 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms