RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 C1orf229Q6ZS94 237 aaPredicted RBP16.07■□□□□ 0.16
RBFOX1-215ENST00000553186 OR1S1Q8NH92 325 aa16.07■□□□□ 0.16
RBFOX1-215ENST00000553186 TRBV23-1A0A0A0MS06 115 aa16.06■□□□□ 0.16
RBFOX1-215ENST00000553186 PIGBOS1A0A0B4J2F0 54 aa16.06■□□□□ 0.16
RBFOX1-215ENST00000553186 AP2S1P53680 142 aaPredicted RBP16.06■□□□□ 0.16
RBFOX1-215ENST00000553186 CATR1Q13166 79 aa16.06■□□□□ 0.16
RBFOX1-215ENST00000553186 ESCO2Q56NI9 601 aa16.06■□□□□ 0.16
RBFOX1-215ENST00000553186 ODF3L1Q8IXM7 274 aa16.06■□□□□ 0.16
RBFOX1-215ENST00000553186 IGFBPL1Q8WX77 278 aa16.06■□□□□ 0.16
RBFOX1-215ENST00000553186 DCUN1D4Q92564 292 aa16.06■□□□□ 0.16
RBFOX1-215ENST00000553186 RRNAD1Q96FB5 475 aaKnown RBP16.06■□□□□ 0.16
RBFOX1-215ENST00000553186 ARL6Q9H0F7 186 aa16.06■□□□□ 0.16
RBFOX1-215ENST00000553186 C17orf98A8MV24 154 aa16.06■□□□□ 0.16
RBFOX1-215ENST00000553186 PET100P0DJ07 73 aa16.06■□□□□ 0.16
RBFOX1-215ENST00000553186 DUTP33316 252 aaKnown RBP16.06■□□□□ 0.16
RBFOX1-215ENST00000553186 TLE4Q04727 773 aa16.06■□□□□ 0.16
RBFOX1-215ENST00000553186 RPL39P5Q59GN2 51 aa16.06■□□□□ 0.16
RBFOX1-215ENST00000553186 ACOT7LQ6ZUV0 252 aa16.06■□□□□ 0.16
RBFOX1-215ENST00000553186 C11orf42Q8N5U0 333 aa16.06■□□□□ 0.16
RBFOX1-215ENST00000553186 TCTEX1D2Q8WW35 142 aa16.06■□□□□ 0.16
RBFOX1-215ENST00000553186 FAM212BQ9NTI7 297 aaPredicted RBP16.06■□□□□ 0.16
RBFOX1-215ENST00000553186 MIOXQ9UGB7 285 aa16.06■□□□□ 0.16
RBFOX1-215ENST00000553186 GPR37O15354 613 aa16.05■□□□□ 0.16
RBFOX1-215ENST00000553186 DEDDO75618 318 aa16.05■□□□□ 0.16
RBFOX1-215ENST00000553186 OR2F2O95006 317 aa16.05■□□□□ 0.16
RBFOX1-215ENST00000553186 IGKV1-5P01602 117 aa16.05■□□□□ 0.16
RBFOX1-215ENST00000553186 C4BPBP20851 252 aa16.05■□□□□ 0.16
RBFOX1-215ENST00000553186 EFNA4P52798 201 aa16.05■□□□□ 0.16
RBFOX1-215ENST00000553186 OR2F1Q13607 317 aa16.05■□□□□ 0.16
RBFOX1-215ENST00000553186 SLC25A48Q6ZT89 311 aaKnown RBP16.05■□□□□ 0.16
RBFOX1-215ENST00000553186 FOXRED2Q8IWF2 684 aa16.05■□□□□ 0.16
RBFOX1-215ENST00000553186 KCNRGQ8N5I3 272 aa16.05■□□□□ 0.16
RBFOX1-215ENST00000553186 SPIN2AQ99865 258 aa16.05■□□□□ 0.16
RBFOX1-215ENST00000553186 SPIN2BQ9BPZ2 258 aa16.05■□□□□ 0.16
RBFOX1-215ENST00000553186 ZNF251Q9BRH9 671 aa16.05■□□□□ 0.16
RBFOX1-215ENST00000553186 KMT2BQ9UMN6 2715 aaPredicted RBP16.05■□□□□ 0.16
RBFOX1-215ENST00000553186 MALRD1Q5VYJ5 2156 aa16.05■□□□□ 0.16
RBFOX1-215ENST00000553186 K7EPK0 472 aa16.04■□□□□ 0.16
RBFOX1-215ENST00000553186 LPAR6P43657 344 aa16.04■□□□□ 0.16
RBFOX1-215ENST00000553186 GNG10P50151 68 aa16.04■□□□□ 0.16
RBFOX1-215ENST00000553186 OR2B11Q5JQS5 317 aa16.04■□□□□ 0.16
RBFOX1-215ENST00000553186 NCR3LG1Q68D85 454 aa16.04■□□□□ 0.16
RBFOX1-215ENST00000553186 FAM71E2Q8N5Q1 922 aa16.04■□□□□ 0.16
RBFOX1-215ENST00000553186 TCTEX1D1Q8N7M0 179 aa16.04■□□□□ 0.16
RBFOX1-215ENST00000553186 LSM10Q969L4 123 aaKnown RBP16.04■□□□□ 0.16
RBFOX1-215ENST00000553186 GPR146Q96CH1 333 aa16.04■□□□□ 0.16
RBFOX1-215ENST00000553186 NEIL1Q96FI4 390 aaPredicted RBP16.04■□□□□ 0.16
RBFOX1-215ENST00000553186 A0A0D9SG52 128 aa16.04■□□□□ 0.16
RBFOX1-215ENST00000553186 SCGB1D2O95969 90 aa16.04■□□□□ 0.16
RBFOX1-215ENST00000553186 WDR25Q64LD2 544 aaPredicted RBP16.04■□□□□ 0.16
RBFOX1-215ENST00000553186 SPAG16Q8N0X2 631 aa16.04■□□□□ 0.16
RBFOX1-215ENST00000553186 INO80EQ8NBZ0 244 aaPredicted RBP16.04■□□□□ 0.16
RBFOX1-215ENST00000553186 OR8B3Q8NGG8 313 aa16.04■□□□□ 0.16
RBFOX1-215ENST00000553186 OR8B2Q96RD0 313 aa16.04■□□□□ 0.16
RBFOX1-215ENST00000553186 AKAP6Q13023 2319 aa16.04■□□□□ 0.16
RBFOX1-215ENST00000553186 SAA2-SAA4A0A096LPE2 208 aa16.03■□□□□ 0.16
RBFOX1-215ENST00000553186 RAB29O14966 203 aa16.03■□□□□ 0.16
RBFOX1-215ENST00000553186 SAA2P0DJI9 122 aaPredicted RBP16.03■□□□□ 0.16
RBFOX1-215ENST00000553186 TEX261Q6UWH6 196 aa16.03■□□□□ 0.16
RBFOX1-215ENST00000553186 Q6ZRM9 215 aa16.03■□□□□ 0.16
RBFOX1-215ENST00000553186 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.03■□□□□ 0.16
RBFOX1-215ENST00000553186 LSM5Q9Y4Y9 91 aaKnown RBP16.03■□□□□ 0.16
RBFOX1-215ENST00000553186 U3KQ87 197 aa16.03■□□□□ 0.16
RBFOX1-215ENST00000553186 MSGN1A6NI15 193 aa16.03■□□□□ 0.16
RBFOX1-215ENST00000553186 M0R1X1 148 aa16.03■□□□□ 0.16
RBFOX1-215ENST00000553186 PITX3O75364 302 aa16.03■□□□□ 0.16
RBFOX1-215ENST00000553186 SLC25A6P12236 298 aa16.03■□□□□ 0.16
RBFOX1-215ENST00000553186 IZUMO4Q1ZYL8 232 aa16.03■□□□□ 0.16
RBFOX1-215ENST00000553186 ZNRD1Q9P1U0 126 aa16.03■□□□□ 0.16
RBFOX1-215ENST00000553186 CHD6Q8TD26 2715 aa16.03■□□□□ 0.16
RBFOX1-215ENST00000553186 LRRK2Q5S007 2527 aa16.03■□□□□ 0.16
RBFOX1-215ENST00000553186 ST8SIA3O43173 380 aa16.02■□□□□ 0.16
RBFOX1-215ENST00000553186 ZNF816Q0VGE8 651 aaPredicted RBP16.02■□□□□ 0.16
RBFOX1-215ENST00000553186 LYG1Q8N1E2 194 aa16.02■□□□□ 0.16
RBFOX1-215ENST00000553186 C8orf46Q8TAG6 207 aa16.02■□□□□ 0.16
RBFOX1-215ENST00000553186 ZFP57Q9NU63 452 aa16.02■□□□□ 0.16
RBFOX1-215ENST00000553186 POMT1Q9Y6A1 747 aa16.02■□□□□ 0.16
RBFOX1-215ENST00000553186 YLPM1P49750 1951 aaKnown RBP16.02■□□□□ 0.15
RBFOX1-215ENST00000553186 A0A1B0GU03 582 aa16.02■□□□□ 0.15
RBFOX1-215ENST00000553186 ANKRD34BA5PLL1 514 aa16.02■□□□□ 0.15
RBFOX1-215ENST00000553186 S1PR2O95136 353 aa16.02■□□□□ 0.15
RBFOX1-215ENST00000553186 RLN2P04090 185 aa16.02■□□□□ 0.15
RBFOX1-215ENST00000553186 CXorf66Q5JRM2 361 aaPredicted RBP16.02■□□□□ 0.15
RBFOX1-215ENST00000553186 THOC7Q6I9Y2 204 aaKnown RBP16.02■□□□□ 0.15
RBFOX1-215ENST00000553186 OR8H1Q8NGG4 311 aa16.02■□□□□ 0.15
RBFOX1-215ENST00000553186 AQP10Q96PS8 301 aa16.02■□□□□ 0.15
RBFOX1-215ENST00000553186 PATZ1Q9HBE1 687 aaKnown RBP16.02■□□□□ 0.15
RBFOX1-215ENST00000553186 RCL1Q9Y2P8 373 aaKnown RBP16.02■□□□□ 0.15
RBFOX1-215ENST00000553186 UTP20O75691 2785 aaKnown RBP16.01■□□□□ 0.15
RBFOX1-215ENST00000553186 A0A087X0M5 115 aa16.01■□□□□ 0.15
RBFOX1-215ENST00000553186 A0A1B0GX30 115 aa16.01■□□□□ 0.15
RBFOX1-215ENST00000553186 CFDP00746 253 aaPredicted RBP16.01■□□□□ 0.15
RBFOX1-215ENST00000553186 NKX2-1P43699 371 aaPredicted RBP16.01■□□□□ 0.15
RBFOX1-215ENST00000553186 AKR1C2P52895 323 aa16.01■□□□□ 0.15
RBFOX1-215ENST00000553186 ID3Q02535 119 aa16.01■□□□□ 0.15
RBFOX1-215ENST00000553186 ZNF680Q8NEM1 530 aa16.01■□□□□ 0.15
RBFOX1-215ENST00000553186 DDB2Q92466 427 aa16.01■□□□□ 0.15
RBFOX1-215ENST00000553186 F5H0A9 414 aaPredicted RBP16■□□□□ 0.15
RBFOX1-215ENST00000553186 P0C879 139 aa16■□□□□ 0.15
RBFOX1-215ENST00000553186 IGHV1-8P0DP01 117 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms