RNA–Protein interactions for RNA: ENST00000552823.5

LIMA1-215, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-215ENST00000552823 NCR3LG1Q68D85 454 aa4.69□□□□□ -1.66
LIMA1-215ENST00000552823 ACP7Q6ZNF0 438 aa4.69□□□□□ -1.66
LIMA1-215ENST00000552823 C11orf53Q8IXP5 236 aa4.69□□□□□ -1.66
LIMA1-215ENST00000552823 H1FOOQ8IZA3 346 aaPredicted RBP4.69□□□□□ -1.66
LIMA1-215ENST00000552823 NECAP1Q8NC96 275 aa4.69□□□□□ -1.66
LIMA1-215ENST00000552823 OR4D5Q8NGN0 318 aa4.69□□□□□ -1.66
LIMA1-215ENST00000552823 PHYHIPLQ96FC7 376 aa4.69□□□□□ -1.66
LIMA1-215ENST00000552823 SLC25A31Q9H0C2 315 aa4.69□□□□□ -1.66
LIMA1-215ENST00000552823 GP6Q9HCN6 339 aa4.69□□□□□ -1.66
LIMA1-215ENST00000552823 TUBD1Q9UJT1 453 aa4.69□□□□□ -1.66
LIMA1-215ENST00000552823 EPG5Q9HCE0 2579 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 TRAV3A0A0B4J244 114 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 LINC00473A8K010 186 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 MKRN2OSH3BPM6 223 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 TAAR5O14804 337 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 TMPRSS2O15393 492 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 SLC31A2O15432 143 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 LY6HO94772 140 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 CRYBA1P05813 215 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 P2RY1P47900 373 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 IL13RA2Q14627 380 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 ZNF585BQ52M93 769 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 C4orf17Q53FE4 359 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 ZNF343Q6P1L6 599 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 H2BFWTQ7Z2G1 175 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 RBMXL3Q8N7X1 1067 aaKnown RBP4.68□□□□□ -1.66
LIMA1-215ENST00000552823 FAM122AQ96E09 287 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 OR4C12Q96R67 309 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 TMUB1Q9BVT8 246 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 MRPL37Q9BZE1 423 aaKnown RBP4.68□□□□□ -1.66
LIMA1-215ENST00000552823 WIPI2Q9Y4P8 454 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 FAM215AQ9Y5M1 114 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 LRRK2Q5S007 2527 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 USP9XQ93008 2570 aaPredicted RBP4.68□□□□□ -1.66
LIMA1-215ENST00000552823 IGHV3-72A0A0B4J1Y9 119 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 A0A0U1RQK1 487 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 C7orf77A4D0Y5 90 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 SNAPINO95295 136 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 IFNA4P05014 189 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 MMP9P14780 707 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 UCP1P25874 307 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 KLF3P57682 345 aaPredicted RBP4.68□□□□□ -1.66
LIMA1-215ENST00000552823 SELENOVP59797 346 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 TNFAIP6P98066 277 aaPredicted RBP4.68□□□□□ -1.66
LIMA1-215ENST00000552823 SMIM21Q3B7S5 101 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 GCSAMLQ5JQS6 135 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 PRAMEF5Q5TYX0 476 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 FAM122CQ6P4D5 195 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 ZNF497Q6ZNH5 498 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 Q6ZSR3 168 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 ABHD12Q8N2K0 398 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 CLRN3Q8NCR9 226 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 LINC01560Q8TB33 94 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 GATAD1Q8WUU5 269 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 ASB13Q8WXK3 278 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 RPUSD4Q96CM3 377 aaKnown RBP4.68□□□□□ -1.66
LIMA1-215ENST00000552823 HEYLQ9NQ87 328 aaPredicted RBP4.68□□□□□ -1.66
LIMA1-215ENST00000552823 RPRMQ9NS64 109 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 HCFC1P51610 2035 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 SONP18583 2426 aaKnown RBP4.68□□□□□ -1.66
LIMA1-215ENST00000552823 PKD1L2Q7Z442 2459 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 PRRG2O14669 202 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 SPINT2O43291 252 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 RPS10P46783 165 aaKnown RBP4.68□□□□□ -1.66
LIMA1-215ENST00000552823 PAX9P55771 341 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 BTNL8Q6UX41 500 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 LHFPL4Q7Z7J7 247 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 FAM185AQ8N0U4 392 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 LRFN3Q9BTN0 628 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 PKIBQ9C010 78 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 RIMS4Q9H426 269 aaPredicted RBP4.68□□□□□ -1.66
LIMA1-215ENST00000552823 OPA3Q9H6K4 179 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 PATZ1Q9HBE1 687 aaKnown RBP4.68□□□□□ -1.66
LIMA1-215ENST00000552823 MED9Q9NWA0 146 aa4.68□□□□□ -1.66
LIMA1-215ENST00000552823 ODAMA1E959 279 aa4.67□□□□□ -1.66
LIMA1-215ENST00000552823 RAB19A4D1S5 217 aa4.67□□□□□ -1.66
LIMA1-215ENST00000552823 IQCF6A8MYZ5 107 aa4.67□□□□□ -1.66
LIMA1-215ENST00000552823 H0Y980 276 aa4.67□□□□□ -1.66
LIMA1-215ENST00000552823 AQP7O14520 342 aa4.67□□□□□ -1.66
LIMA1-215ENST00000552823 SNAPC5O75971 98 aa4.67□□□□□ -1.66
LIMA1-215ENST00000552823 HSPB1P04792 205 aaKnown RBP4.67□□□□□ -1.66
LIMA1-215ENST00000552823 S100A6P06703 90 aa4.67□□□□□ -1.66
LIMA1-215ENST00000552823 RD3LP0DJH9 198 aa4.67□□□□□ -1.66
LIMA1-215ENST00000552823 SPP1P10451 314 aa4.67□□□□□ -1.66
LIMA1-215ENST00000552823 DVL1P1P54792 670 aaPredicted RBP4.67□□□□□ -1.66
LIMA1-215ENST00000552823 UCP3P55916 312 aa4.67□□□□□ -1.66
LIMA1-215ENST00000552823 RAB2AP61019 212 aa4.67□□□□□ -1.66
LIMA1-215ENST00000552823 UBE2KP61086 200 aa4.67□□□□□ -1.66
LIMA1-215ENST00000552823 ZNF266Q14584 549 aa4.67□□□□□ -1.66
LIMA1-215ENST00000552823 NRN1LQ496H8 165 aa4.67□□□□□ -1.66
LIMA1-215ENST00000552823 NMSQ5H8A3 153 aa4.67□□□□□ -1.66
LIMA1-215ENST00000552823 GCSAMQ8N6F7 178 aa4.67□□□□□ -1.66
LIMA1-215ENST00000552823 CYB561D1Q8N8Q1 229 aa4.67□□□□□ -1.66
LIMA1-215ENST00000552823 UBAC2Q8NBM4 344 aa4.67□□□□□ -1.66
LIMA1-215ENST00000552823 SSMEM1Q8WWF3 244 aa4.67□□□□□ -1.66
LIMA1-215ENST00000552823 C5orf30Q96GV9 206 aa4.67□□□□□ -1.66
LIMA1-215ENST00000552823 RBKSQ9H477 322 aa4.67□□□□□ -1.66
LIMA1-215ENST00000552823 CSMD1Q96PZ7 3565 aa4.67□□□□□ -1.66
LIMA1-215ENST00000552823 IGKV1D-17A0A075B6S4 117 aa4.67□□□□□ -1.66
LIMA1-215ENST00000552823 IGHV3-21A0A0B4J1V1 117 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms