RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 PRB4P10163 310 aaPredicted RBP6.75□□□□□ -1.33
CHPT1-208ENST00000552215 MYOD1P15172 320 aa6.75□□□□□ -1.33
CHPT1-208ENST00000552215 HERPUD1Q15011 391 aa6.75□□□□□ -1.33
CHPT1-208ENST00000552215 ANKRD55Q3KP44 614 aa6.75□□□□□ -1.33
CHPT1-208ENST00000552215 NCR3LG1Q68D85 454 aa6.75□□□□□ -1.33
CHPT1-208ENST00000552215 HCP5Q6MZN7 132 aa6.75□□□□□ -1.33
CHPT1-208ENST00000552215 ZNF497Q6ZNH5 498 aa6.75□□□□□ -1.33
CHPT1-208ENST00000552215 OR8H3Q8N146 312 aa6.75□□□□□ -1.33
CHPT1-208ENST00000552215 SLC35G3Q8N808 338 aa6.75□□□□□ -1.33
CHPT1-208ENST00000552215 CITED4Q96RK1 184 aa6.75□□□□□ -1.33
CHPT1-208ENST00000552215 COMMD5Q9GZQ3 224 aa6.75□□□□□ -1.33
CHPT1-208ENST00000552215 NAA60Q9H7X0 242 aa6.75□□□□□ -1.33
CHPT1-208ENST00000552215 IGKV1-6A0A0C4DH72 117 aa6.75□□□□□ -1.33
CHPT1-208ENST00000552215 GSTZ1O43708 216 aaPredicted RBP6.75□□□□□ -1.33
CHPT1-208ENST00000552215 USF1P22415 310 aaPredicted RBP6.75□□□□□ -1.33
CHPT1-208ENST00000552215 SCAND1P57086 179 aa6.75□□□□□ -1.33
CHPT1-208ENST00000552215 TFF3Q07654 80 aa6.75□□□□□ -1.33
CHPT1-208ENST00000552215 TMEM267Q0VDI3 215 aaPredicted RBP6.75□□□□□ -1.33
CHPT1-208ENST00000552215 ECSCRQ19T08 205 aa6.75□□□□□ -1.33
CHPT1-208ENST00000552215 MOB1BQ7L9L4 216 aa6.75□□□□□ -1.33
CHPT1-208ENST00000552215 SLC38A6Q8IZM9 456 aa6.75□□□□□ -1.33
CHPT1-208ENST00000552215 WFDC11Q8NEX6 87 aa6.75□□□□□ -1.33
CHPT1-208ENST00000552215 CMTM3Q96MX0 182 aa6.75□□□□□ -1.33
CHPT1-208ENST00000552215 MRPL20Q9BYC9 149 aaKnown RBP6.75□□□□□ -1.33
CHPT1-208ENST00000552215 SHARPINQ9H0F6 387 aa6.75□□□□□ -1.33
CHPT1-208ENST00000552215 RPUSD1Q9UJJ7 312 aaKnown RBP6.75□□□□□ -1.33
CHPT1-208ENST00000552215 SOX21Q9Y651 276 aaPredicted RBP6.75□□□□□ -1.33
CHPT1-208ENST00000552215 IGHV3OR16-8A0A075B7F1 116 aa6.74□□□□□ -1.33
CHPT1-208ENST00000552215 KIAA1324LA8MWY0 1029 aaPredicted RBP6.74□□□□□ -1.33
CHPT1-208ENST00000552215 S1PR2O95136 353 aa6.74□□□□□ -1.33
CHPT1-208ENST00000552215 PTBP1P26599 531 aaKnown RBP eCLIP6.74□□□□□ -1.331e-6■■■■□ 26
CHPT1-208ENST00000552215 NKX2-1P43699 371 aaPredicted RBP6.74□□□□□ -1.33
CHPT1-208ENST00000552215 SRSF2Q01130 221 aaKnown RBP6.74□□□□□ -1.33
CHPT1-208ENST00000552215 DEFA5Q01523 94 aa6.74□□□□□ -1.33
CHPT1-208ENST00000552215 FGL1Q08830 312 aa6.74□□□□□ -1.33
CHPT1-208ENST00000552215 RAB32Q13637 225 aa6.74□□□□□ -1.33
CHPT1-208ENST00000552215 ZNF788Q6ZQV5 615 aa6.74□□□□□ -1.33
CHPT1-208ENST00000552215 MINDY2Q8NBR6 621 aa6.74□□□□□ -1.33
CHPT1-208ENST00000552215 OR10Z1Q8NGY1 313 aa6.74□□□□□ -1.33
CHPT1-208ENST00000552215 ERGIC1Q969X5 290 aa6.74□□□□□ -1.33
CHPT1-208ENST00000552215 AUP1Q9Y679 476 aa6.74□□□□□ -1.33
CHPT1-208ENST00000552215 PGLYRP1O75594 196 aaPredicted RBP6.74□□□□□ -1.33
CHPT1-208ENST00000552215 DANCRP0C864 163 aa6.74□□□□□ -1.33
CHPT1-208ENST00000552215 ELP2Q6IA86 826 aa6.74□□□□□ -1.33
CHPT1-208ENST00000552215 SLC35E4Q6ICL7 350 aa6.74□□□□□ -1.33
CHPT1-208ENST00000552215 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.74□□□□□ -1.33
CHPT1-208ENST00000552215 OR5M8Q8NGP6 311 aa6.74□□□□□ -1.33
CHPT1-208ENST00000552215 RHOVQ96L33 236 aa6.74□□□□□ -1.33
CHPT1-208ENST00000552215 TMUB1Q9BVT8 246 aa6.74□□□□□ -1.33
CHPT1-208ENST00000552215 ZNF436Q9C0F3 470 aaPredicted RBP6.74□□□□□ -1.33
CHPT1-208ENST00000552215 KIAA1456Q9P272 454 aa6.74□□□□□ -1.33
CHPT1-208ENST00000552215 RABL2AQ9UBK7 228 aaPredicted RBP6.74□□□□□ -1.33
CHPT1-208ENST00000552215 RABL2BQ9UNT1 228 aa6.74□□□□□ -1.33
CHPT1-208ENST00000552215 ZANQ9Y493 2812 aa6.74□□□□□ -1.33
CHPT1-208ENST00000552215 KANTRA0A1W2PQU2 76 aa6.74□□□□□ -1.33
CHPT1-208ENST00000552215 BTBD17A6NE02 478 aa6.74□□□□□ -1.33
CHPT1-208ENST00000552215 MPZP25189 248 aa6.74□□□□□ -1.33
CHPT1-208ENST00000552215 HTR1DP28221 377 aa6.74□□□□□ -1.33
CHPT1-208ENST00000552215 KRTAP27-1Q3LI81 207 aa6.74□□□□□ -1.33
CHPT1-208ENST00000552215 CXorf66Q5JRM2 361 aaPredicted RBP6.74□□□□□ -1.33
CHPT1-208ENST00000552215 OR13D1Q8NGV5 346 aa6.74□□□□□ -1.33
CHPT1-208ENST00000552215 PPP1R14BQ96C90 147 aa6.74□□□□□ -1.33
CHPT1-208ENST00000552215 R3HDM4Q96D70 268 aa6.74□□□□□ -1.33
CHPT1-208ENST00000552215 MS4A10Q96PG2 267 aa6.74□□□□□ -1.33
CHPT1-208ENST00000552215 GNB4Q9HAV0 340 aa6.74□□□□□ -1.33
CHPT1-208ENST00000552215 MAST4O15021 2626 aa6.74□□□□□ -1.33
CHPT1-208ENST00000552215 RNF212BA8MTL3 300 aa6.74□□□□□ -1.33
CHPT1-208ENST00000552215 IFNL4K9M1U5 179 aa6.74□□□□□ -1.33
CHPT1-208ENST00000552215 RAB14P61106 215 aa6.74□□□□□ -1.33
CHPT1-208ENST00000552215 FBXL19-AS1Q494R0 122 aa6.74□□□□□ -1.33
CHPT1-208ENST00000552215 FAM76BQ5HYJ3 339 aa6.74□□□□□ -1.33
CHPT1-208ENST00000552215 WSB1Q9Y6I7 421 aa6.74□□□□□ -1.33
CHPT1-208ENST00000552215 SAA2-SAA4A0A096LPE2 208 aa6.73□□□□□ -1.33
CHPT1-208ENST00000552215 RAB29O14966 203 aa6.73□□□□□ -1.33
CHPT1-208ENST00000552215 CTDSPLO15194 276 aa6.73□□□□□ -1.33
CHPT1-208ENST00000552215 HMGB3O15347 200 aaKnown RBP6.73□□□□□ -1.33
CHPT1-208ENST00000552215 NDUFA2O43678 99 aa6.73□□□□□ -1.33
CHPT1-208ENST00000552215 ALX3O95076 343 aa6.73□□□□□ -1.33
CHPT1-208ENST00000552215 METTL15P1P0C7V9 234 aa6.73□□□□□ -1.33
CHPT1-208ENST00000552215 SAA2P0DJI9 122 aaPredicted RBP6.73□□□□□ -1.33
CHPT1-208ENST00000552215 KCNJ3P48549 501 aa6.73□□□□□ -1.33
CHPT1-208ENST00000552215 SWI5Q1ZZU3 235 aa6.73□□□□□ -1.33
CHPT1-208ENST00000552215 CRIP3Q6Q6R5 217 aa6.73□□□□□ -1.33
CHPT1-208ENST00000552215 ALKAL2Q6UX46 152 aa6.73□□□□□ -1.33
CHPT1-208ENST00000552215 VMO1Q7Z5L0 202 aa6.73□□□□□ -1.33
CHPT1-208ENST00000552215 OR11H7Q8NGC8 314 aa6.73□□□□□ -1.33
CHPT1-208ENST00000552215 CHAC2Q8WUX2 184 aa6.73□□□□□ -1.33
CHPT1-208ENST00000552215 CLEC7AQ9BXN2 247 aa6.73□□□□□ -1.33
CHPT1-208ENST00000552215 FBXL15Q9H469 300 aa6.73□□□□□ -1.33
CHPT1-208ENST00000552215 LIN7CQ9NUP9 197 aaKnown RBP6.73□□□□□ -1.33
CHPT1-208ENST00000552215 FAM24AA6NFZ4 105 aa6.73□□□□□ -1.33
CHPT1-208ENST00000552215 ZNF737O75373 536 aa6.73□□□□□ -1.33
CHPT1-208ENST00000552215 FOXH1O75593 365 aa6.73□□□□□ -1.33
CHPT1-208ENST00000552215 ZFP36P26651 326 aaKnown RBP6.73□□□□□ -1.33
CHPT1-208ENST00000552215 MSMO1Q15800 293 aa6.73□□□□□ -1.33
CHPT1-208ENST00000552215 CD276Q5ZPR3 534 aa6.73□□□□□ -1.33
CHPT1-208ENST00000552215 FLYWCH2Q96CP2 140 aaKnown RBP6.73□□□□□ -1.33
CHPT1-208ENST00000552215 ACY3Q96HD9 319 aa6.73□□□□□ -1.33
CHPT1-208ENST00000552215 MARVELD1Q9BSK0 173 aa6.73□□□□□ -1.33
CHPT1-208ENST00000552215 PATZ1Q9HBE1 687 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms