RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, human

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB3IP-216	ENST00000552199		F8W036	122 aa		11.64	□□□□□ -0.55
RAB3IP-216	ENST00000552199	TRIM77	I1YAP6	450 aa		11.64	□□□□□ -0.55
RAB3IP-216	ENST00000552199	C1QL1	O75973	258 aa		11.64	□□□□□ -0.55
RAB3IP-216	ENST00000552199	S1PR2	O95136	353 aa		11.64	□□□□□ -0.55
RAB3IP-216	ENST00000552199	TSPAN15	O95858	294 aa		11.64	□□□□□ -0.55
RAB3IP-216	ENST00000552199	KRAS	P01116	189 aa		11.64	□□□□□ -0.55
RAB3IP-216	ENST00000552199	PRH1	P02810	166 aa		11.64	□□□□□ -0.55
RAB3IP-216	ENST00000552199	CD5	P06127	495 aa		11.64	□□□□□ -0.55
RAB3IP-216	ENST00000552199	OR4A8	P0C604	315 aa		11.64	□□□□□ -0.55
RAB3IP-216	ENST00000552199	G6PC	P35575	357 aa		11.64	□□□□□ -0.55
RAB3IP-216	ENST00000552199	FHIT	P49789	147 aa		11.64	□□□□□ -0.55
RAB3IP-216	ENST00000552199	TAS2R30	P59541	319 aa		11.64	□□□□□ -0.55
RAB3IP-216	ENST00000552199	ZNF616	Q08AN1	781 aa		11.64	□□□□□ -0.55
RAB3IP-216	ENST00000552199	TMEM267	Q0VDI3	215 aa	Predicted RBP	11.64	□□□□□ -0.55
RAB3IP-216	ENST00000552199		Q3ZCU0	254 aa		11.64	□□□□□ -0.55
RAB3IP-216	ENST00000552199	MIDN	Q504T8	468 aa		11.64	□□□□□ -0.55
RAB3IP-216	ENST00000552199	COMMD1	Q8N668	190 aa		11.64	□□□□□ -0.55
RAB3IP-216	ENST00000552199	OR2G3	Q8NGZ4	309 aa		11.64	□□□□□ -0.55
RAB3IP-216	ENST00000552199	RND1	Q92730	232 aa		11.64	□□□□□ -0.55
RAB3IP-216	ENST00000552199	KCNJ16	Q9NPI9	418 aa		11.64	□□□□□ -0.55
RAB3IP-216	ENST00000552199	GNG12	Q9UBI6	72 aa		11.64	□□□□□ -0.55
RAB3IP-216	ENST00000552199	CARHSP1	Q9Y2V2	147 aa	Known RBP	11.64	□□□□□ -0.55
RAB3IP-216	ENST00000552199	RFNG	Q9Y644	331 aa		11.64	□□□□□ -0.55
RAB3IP-216	ENST00000552199	ICE1	Q9Y2F5	2266 aa		11.64	□□□□□ -0.55
RAB3IP-216	ENST00000552199	DYSF	O75923	2080 aa		11.64	□□□□□ -0.55
RAB3IP-216	ENST00000552199	CEP295	Q9C0D2	2601 aa		11.64	□□□□□ -0.55
RAB3IP-216	ENST00000552199	DFFB	O76075	338 aa		11.64	□□□□□ -0.55
RAB3IP-216	ENST00000552199	SELL	P14151	372 aa		11.64	□□□□□ -0.55
RAB3IP-216	ENST00000552199	GPR12	P47775	334 aa		11.64	□□□□□ -0.55
RAB3IP-216	ENST00000552199	UCN	P55089	124 aa		11.64	□□□□□ -0.55
RAB3IP-216	ENST00000552199	LOXL3	P58215	753 aa		11.64	□□□□□ -0.55
RAB3IP-216	ENST00000552199	GNPNAT1	Q96EK6	184 aa	Predicted RBP	11.64	□□□□□ -0.55
RAB3IP-216	ENST00000552199	DIRC2	Q96SL1	478 aa		11.64	□□□□□ -0.55
RAB3IP-216	ENST00000552199	VKORC1	Q9BQB6	163 aa		11.64	□□□□□ -0.55
RAB3IP-216	ENST00000552199	SEC11C	Q9BY50	192 aa		11.64	□□□□□ -0.55
RAB3IP-216	ENST00000552199	CALY	Q9NYX4	217 aa		11.64	□□□□□ -0.55
RAB3IP-216	ENST00000552199	USF3	Q68DE3	2245 aa		11.64	□□□□□ -0.55
RAB3IP-216	ENST00000552199	UMAD1	C9J7I0	102 aa		11.63	□□□□□ -0.55
RAB3IP-216	ENST00000552199	CLDN14	O95500	239 aa		11.63	□□□□□ -0.55
RAB3IP-216	ENST00000552199	CD55	P08174	381 aa		11.63	□□□□□ -0.55
RAB3IP-216	ENST00000552199	SNCA	P37840	140 aa		11.63	□□□□□ -0.55
RAB3IP-216	ENST00000552199	DVL1P1	P54792	670 aa	Predicted RBP	11.63	□□□□□ -0.55
RAB3IP-216	ENST00000552199	UBE2K	P61086	200 aa		11.63	□□□□□ -0.55
RAB3IP-216	ENST00000552199	SVBP	Q8N300	66 aa		11.63	□□□□□ -0.55
RAB3IP-216	ENST00000552199	DEFB108B	Q8NET1	73 aa		11.63	□□□□□ -0.55
RAB3IP-216	ENST00000552199	GAFA1	Q96PS6	74 aa		11.63	□□□□□ -0.55
RAB3IP-216	ENST00000552199	NKX6-2	Q9C056	277 aa	Predicted RBP	11.63	□□□□□ -0.55
RAB3IP-216	ENST00000552199	PTPRQ	Q9UMZ3	2332 aa		11.63	□□□□□ -0.55
RAB3IP-216	ENST00000552199	RAI1	Q7Z5J4	1906 aa	Predicted RBP	11.63	□□□□□ -0.55
RAB3IP-216	ENST00000552199	C17orf100	A8MU93	164 aa		11.62	□□□□□ -0.55
RAB3IP-216	ENST00000552199	RAB29	O14966	203 aa		11.62	□□□□□ -0.55
RAB3IP-216	ENST00000552199	PROP1	O75360	226 aa		11.62	□□□□□ -0.55
RAB3IP-216	ENST00000552199	IRF2	P14316	349 aa		11.62	□□□□□ -0.55
RAB3IP-216	ENST00000552199	LINC00205	P59089	165 aa		11.62	□□□□□ -0.55
RAB3IP-216	ENST00000552199	TNFRSF9	Q07011	255 aa		11.62	□□□□□ -0.55
RAB3IP-216	ENST00000552199	GUCA2B	Q16661	112 aa		11.62	□□□□□ -0.55
RAB3IP-216	ENST00000552199	C17orf58	Q2M2W7	97 aa		11.62	□□□□□ -0.55
RAB3IP-216	ENST00000552199	TEX36	Q5VZQ5	186 aa		11.62	□□□□□ -0.55
RAB3IP-216	ENST00000552199	ZNF788	Q6ZQV5	615 aa		11.62	□□□□□ -0.55
RAB3IP-216	ENST00000552199	FAM213B	Q8TBF2	198 aa		11.62	□□□□□ -0.55
RAB3IP-216	ENST00000552199	PLPPR2	Q96GM1	343 aa		11.62	□□□□□ -0.55
RAB3IP-216	ENST00000552199	WFIKKN1	Q96NZ8	548 aa		11.62	□□□□□ -0.55
RAB3IP-216	ENST00000552199	RBKS	Q9H477	322 aa		11.62	□□□□□ -0.55
RAB3IP-216	ENST00000552199	ZNF665	Q9H7R5	613 aa		11.62	□□□□□ -0.55
RAB3IP-216	ENST00000552199	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	11.62	□□□□□ -0.55
RAB3IP-216	ENST00000552199	HSPB7	Q9UBY9	170 aa		11.62	□□□□□ -0.55
RAB3IP-216	ENST00000552199	LAMP3	Q9UQV4	416 aa		11.62	□□□□□ -0.55
RAB3IP-216	ENST00000552199	RAX	Q9Y2V3	346 aa		11.62	□□□□□ -0.55
RAB3IP-216	ENST00000552199	DSCAML1	Q8TD84	2053 aa		11.62	□□□□□ -0.55
RAB3IP-216	ENST00000552199	DIDO1	Q9BTC0	2240 aa	Known RBP	11.62	□□□□□ -0.55
RAB3IP-216	ENST00000552199	LRRC30	A6NM36	301 aa		11.62	□□□□□ -0.55
RAB3IP-216	ENST00000552199	DNASE2	O00115	360 aa	Predicted RBP	11.62	□□□□□ -0.55
RAB3IP-216	ENST00000552199	TNFRSF1A	P19438	455 aa		11.62	□□□□□ -0.55
RAB3IP-216	ENST00000552199	DUT	P33316	252 aa	Known RBP	11.62	□□□□□ -0.55
RAB3IP-216	ENST00000552199	CCL8	P80075	99 aa		11.62	□□□□□ -0.55
RAB3IP-216	ENST00000552199	ZNF273	Q14593	569 aa		11.62	□□□□□ -0.55
RAB3IP-216	ENST00000552199	NCR3LG1	Q68D85	454 aa		11.62	□□□□□ -0.55
RAB3IP-216	ENST00000552199	DUX4L9	Q6RFH8	374 aa	Predicted RBP	11.62	□□□□□ -0.55
RAB3IP-216	ENST00000552199	TGIF2LY	Q8IUE0	185 aa		11.62	□□□□□ -0.55
RAB3IP-216	ENST00000552199	CD300LF	Q8TDQ1	290 aa		11.62	□□□□□ -0.55
RAB3IP-216	ENST00000552199	CCL13	Q99616	98 aa		11.62	□□□□□ -0.55
RAB3IP-216	ENST00000552199	FAM234A	Q9H0X4	552 aa		11.62	□□□□□ -0.55
RAB3IP-216	ENST00000552199	RAB9B	Q9NP90	201 aa		11.62	□□□□□ -0.55
RAB3IP-216	ENST00000552199	PIEZO1	Q92508	2521 aa		11.62	□□□□□ -0.55
RAB3IP-216	ENST00000552199	TANC2	Q9HCD6	1990 aa		11.61	□□□□□ -0.55
RAB3IP-216	ENST00000552199		C9JQL5	133 aa		11.61	□□□□□ -0.55
RAB3IP-216	ENST00000552199	ITGB1BP1	O14713	200 aa		11.61	□□□□□ -0.55
RAB3IP-216	ENST00000552199	IFNA5	P01569	189 aa		11.61	□□□□□ -0.55
RAB3IP-216	ENST00000552199	GYPA	P02724	150 aa		11.61	□□□□□ -0.55
RAB3IP-216	ENST00000552199	METTL15P1	P0C7V9	234 aa		11.61	□□□□□ -0.55
RAB3IP-216	ENST00000552199	ZNF134	P52741	427 aa		11.61	□□□□□ -0.55
RAB3IP-216	ENST00000552199	ARL16	Q0P5N6	197 aa		11.61	□□□□□ -0.55
RAB3IP-216	ENST00000552199	H2BFWT	Q7Z2G1	175 aa		11.61	□□□□□ -0.55
RAB3IP-216	ENST00000552199	HAPLN4	Q86UW8	402 aa		11.61	□□□□□ -0.55
RAB3IP-216	ENST00000552199	PUSL1	Q8N0Z8	303 aa	Known RBP	11.61	□□□□□ -0.55
RAB3IP-216	ENST00000552199	SCRT1	Q9BWW7	348 aa		11.61	□□□□□ -0.55
RAB3IP-216	ENST00000552199	NGB	Q9NPG2	151 aa		11.61	□□□□□ -0.55
RAB3IP-216	ENST00000552199	DCAF16	Q9NXF7	216 aa		11.61	□□□□□ -0.55
RAB3IP-216	ENST00000552199	TRGV10	A0A0A0MS01	117 aa		11.6	□□□□□ -0.55
RAB3IP-216	ENST00000552199	KBTBD11-OT1	A0A1B0GTJ5	212 aa		11.6	□□□□□ -0.55

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