RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 NCR3LG1Q68D85 454 aa16.22■□□□□ 0.19
SSH1-209ENST00000551165 CLEC18CQ8NCF0 446 aa16.22■□□□□ 0.19
SSH1-209ENST00000551165 ST8SIA2Q92186 375 aa16.22■□□□□ 0.19
SSH1-209ENST00000551165 CYTL1Q9NRR1 136 aa16.22■□□□□ 0.19
SSH1-209ENST00000551165 IDI2-AS1Q9NZ38 188 aa16.22■□□□□ 0.19
SSH1-209ENST00000551165 DUXBA0A1W2PPF3 345 aa16.21■□□□□ 0.19
SSH1-209ENST00000551165 ZNF729A6NN14 1252 aaPredicted RBP16.21■□□□□ 0.19
SSH1-209ENST00000551165 F5H0A9 414 aaPredicted RBP16.21■□□□□ 0.19
SSH1-209ENST00000551165 ST8SIA3O43173 380 aa16.21■□□□□ 0.19
SSH1-209ENST00000551165 SMCO1Q147U7 214 aa16.21■□□□□ 0.19
SSH1-209ENST00000551165 SPAG16Q8N0X2 631 aa16.21■□□□□ 0.19
SSH1-209ENST00000551165 ARPC5LQ9BPX5 153 aa16.21■□□□□ 0.19
SSH1-209ENST00000551165 LINC00574Q9H8X3 128 aa16.21■□□□□ 0.19
SSH1-209ENST00000551165 POMT1Q9Y6A1 747 aa16.21■□□□□ 0.19
SSH1-209ENST00000551165 LINC00312Q9Y6C7 94 aa16.21■□□□□ 0.19
SSH1-209ENST00000551165 TACC2O95359 2948 aa16.21■□□□□ 0.19
SSH1-209ENST00000551165 B3GALNT1O75752 331 aa16.21■□□□□ 0.19
SSH1-209ENST00000551165 S1PR2O95136 353 aa16.21■□□□□ 0.19
SSH1-209ENST00000551165 IGFBP2P18065 325 aa16.21■□□□□ 0.19
SSH1-209ENST00000551165 RPL12P30050 165 aaKnown RBP16.21■□□□□ 0.19
SSH1-209ENST00000551165 NKX2-1P43699 371 aaPredicted RBP16.21■□□□□ 0.19
SSH1-209ENST00000551165 KAAG1Q9UBP8 84 aa16.21■□□□□ 0.19
SSH1-209ENST00000551165 NDUFA5Q16718 116 aa16.2■□□□□ 0.18
SSH1-209ENST00000551165 LRRC10Q5BKY1 277 aa16.2■□□□□ 0.18
SSH1-209ENST00000551165 ZNF439Q8NDP4 499 aa16.2■□□□□ 0.18
SSH1-209ENST00000551165 RNASE11Q8TAA1 199 aaKnown RBP16.2■□□□□ 0.18
SSH1-209ENST00000551165 ABHD14AQ9BUJ0 271 aa16.2■□□□□ 0.18
SSH1-209ENST00000551165 ZNF462Q96JM2 2506 aa16.2■□□□□ 0.18
SSH1-209ENST00000551165 RNF212BA8MTL3 300 aa16.2■□□□□ 0.18
SSH1-209ENST00000551165 TMEM50AO95807 157 aa16.2■□□□□ 0.18
SSH1-209ENST00000551165 KRASP01116 189 aa16.2■□□□□ 0.18
SSH1-209ENST00000551165 DUTP33316 252 aaKnown RBP16.2■□□□□ 0.18
SSH1-209ENST00000551165 G6PCP35575 357 aa16.2■□□□□ 0.18
SSH1-209ENST00000551165 AKR1C2P52895 323 aa16.2■□□□□ 0.18
SSH1-209ENST00000551165 THOC7Q6I9Y2 204 aaKnown RBP16.2■□□□□ 0.18
SSH1-209ENST00000551165 ODF3L1Q8IXM7 274 aa16.2■□□□□ 0.18
SSH1-209ENST00000551165 C11orf1Q9H5F2 150 aa16.2■□□□□ 0.18
SSH1-209ENST00000551165 CACNG5Q9UF02 275 aa16.2■□□□□ 0.18
SSH1-209ENST00000551165 UTP20O75691 2785 aaKnown RBP16.2■□□□□ 0.18
SSH1-209ENST00000551165 AKAP6Q13023 2319 aa16.19■□□□□ 0.18
SSH1-209ENST00000551165 M0R1X1 148 aa16.19■□□□□ 0.18
SSH1-209ENST00000551165 SSSCA1O60232 199 aa16.19■□□□□ 0.18
SSH1-209ENST00000551165 PITX3O75364 302 aa16.19■□□□□ 0.18
SSH1-209ENST00000551165 IGHV2-70P01814 119 aa16.19■□□□□ 0.18
SSH1-209ENST00000551165 FAM74A1Q5RGS3 127 aa16.19■□□□□ 0.18
SSH1-209ENST00000551165 SPIN2AQ99865 258 aa16.19■□□□□ 0.18
SSH1-209ENST00000551165 SPIN2BQ9BPZ2 258 aa16.19■□□□□ 0.18
SSH1-209ENST00000551165 SMIM3Q9BZL3 60 aa16.19■□□□□ 0.18
SSH1-209ENST00000551165 RAB1BQ9H0U4 201 aa16.19■□□□□ 0.18
SSH1-209ENST00000551165 UBTD1Q9HAC8 227 aa16.19■□□□□ 0.18
SSH1-209ENST00000551165 RPUSD1Q9UJJ7 312 aaKnown RBP16.19■□□□□ 0.18
SSH1-209ENST00000551165 KIAA1324LA8MWY0 1029 aaPredicted RBP16.19■□□□□ 0.18
SSH1-209ENST00000551165 E5RGE8 158 aa16.19■□□□□ 0.18
SSH1-209ENST00000551165 NDUFS7O75251 213 aa16.19■□□□□ 0.18
SSH1-209ENST00000551165 NUP62P37198 522 aaPredicted RBP16.19■□□□□ 0.18
SSH1-209ENST00000551165 CDKN1AP38936 164 aa16.19■□□□□ 0.18
SSH1-209ENST00000551165 ID3Q02535 119 aa16.19■□□□□ 0.18
SSH1-209ENST00000551165 MEF2CQ06413 473 aaPredicted RBP16.19■□□□□ 0.18
SSH1-209ENST00000551165 ZC4H2Q9NQZ6 224 aa16.19■□□□□ 0.18
SSH1-209ENST00000551165 ASH1LQ9NR48 2969 aaKnown RBP16.19■□□□□ 0.18
SSH1-209ENST00000551165 NSG2Q9Y328 171 aa16.19■□□□□ 0.18
SSH1-209ENST00000551165 CATR1Q13166 79 aa16.18■□□□□ 0.18
SSH1-209ENST00000551165 MSMO1Q15800 293 aa16.18■□□□□ 0.18
SSH1-209ENST00000551165 DTX2Q86UW9 622 aa16.18■□□□□ 0.18
SSH1-209ENST00000551165 ZNF714Q96N38 554 aa16.18■□□□□ 0.18
SSH1-209ENST00000551165 MYO18BQ8IUG5 2567 aa16.18■□□□□ 0.18
SSH1-209ENST00000551165 SAA2-SAA4A0A096LPE2 208 aa16.18■□□□□ 0.18
SSH1-209ENST00000551165 SAA2P0DJI9 122 aaPredicted RBP16.18■□□□□ 0.18
SSH1-209ENST00000551165 ESCO2Q56NI9 601 aa16.18■□□□□ 0.18
SSH1-209ENST00000551165 ZNF66Q6ZN08 573 aa16.18■□□□□ 0.18
SSH1-209ENST00000551165 ZNF841Q6ZN19 808 aa16.18■□□□□ 0.18
SSH1-209ENST00000551165 LYG1Q8N1E2 194 aa16.18■□□□□ 0.18
SSH1-209ENST00000551165 LSM10Q969L4 123 aaKnown RBP16.18■□□□□ 0.18
SSH1-209ENST00000551165 HSD17B10Q99714 261 aaKnown RBP16.18■□□□□ 0.18
SSH1-209ENST00000551165 ZNF251Q9BRH9 671 aa16.18■□□□□ 0.18
SSH1-209ENST00000551165 GSX2Q9BZM3 304 aa16.18■□□□□ 0.18
SSH1-209ENST00000551165 TAS2R3Q9NYW6 316 aa16.18■□□□□ 0.18
SSH1-209ENST00000551165 UBA52P62987 128 aaKnown RBP16.17■□□□□ 0.18
SSH1-209ENST00000551165 MALRD1Q5VYJ5 2156 aa16.17■□□□□ 0.18
SSH1-209ENST00000551165 A0A1B0GU03 582 aa16.16■□□□□ 0.18
SSH1-209ENST00000551165 FAM24AA6NFZ4 105 aa16.16■□□□□ 0.18
SSH1-209ENST00000551165 DLX1P56177 255 aa16.16■□□□□ 0.18
SSH1-209ENST00000551165 TMEM33P57088 247 aa16.16■□□□□ 0.18
SSH1-209ENST00000551165 NHLH2Q02577 135 aa16.16■□□□□ 0.18
SSH1-209ENST00000551165 ZNF295-AS1Q8N0V1 137 aa16.16■□□□□ 0.18
SSH1-209ENST00000551165 SCARB1Q8WTV0 552 aa16.16■□□□□ 0.18
SSH1-209ENST00000551165 DOCK11Q5JSL3 2073 aa16.16■□□□□ 0.18
SSH1-209ENST00000551165 CHST1O43916 411 aa16.16■□□□□ 0.18
SSH1-209ENST00000551165 FCGR3BO75015 233 aa16.16■□□□□ 0.18
SSH1-209ENST00000551165 DAOP14920 347 aa16.16■□□□□ 0.18
SSH1-209ENST00000551165 RPL7L1Q6DKI1 246 aaKnown RBP16.16■□□□□ 0.18
SSH1-209ENST00000551165 FBXL17Q9UF56 701 aa16.16■□□□□ 0.18
SSH1-209ENST00000551165 NDUFA2O43678 99 aa16.15■□□□□ 0.18
SSH1-209ENST00000551165 PRB3Q04118 309 aaPredicted RBP16.15■□□□□ 0.18
SSH1-209ENST00000551165 DOPEY1Q5JWR5 2465 aa16.15■□□□□ 0.18
SSH1-209ENST00000551165 CLLU1Q5K131 121 aa16.15■□□□□ 0.18
SSH1-209ENST00000551165 HEPN1Q6WQI6 88 aa16.15■□□□□ 0.18
SSH1-209ENST00000551165 GAL3ST2Q9H3Q3 398 aa16.15■□□□□ 0.18
SSH1-209ENST00000551165 A6NNC1 897 aa16.15■□□□□ 0.18
SSH1-209ENST00000551165 C1QL1O75973 258 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms