RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 OR4C12Q96R67 309 aa16.68■□□□□ 0.26
SMARCC2-210ENST00000550519 RIMS4Q9H426 269 aaPredicted RBP16.68■□□□□ 0.26
SMARCC2-210ENST00000550519 KCNK15Q9H427 330 aa16.68■□□□□ 0.26
SMARCC2-210ENST00000550519 SLA2Q9H6Q3 261 aa16.68■□□□□ 0.26
SMARCC2-210ENST00000550519 ZMAT4Q9H898 229 aa16.68■□□□□ 0.26
SMARCC2-210ENST00000550519 CHMP1AQ9HD42 196 aaPredicted RBP16.68■□□□□ 0.26
SMARCC2-210ENST00000550519 FKBP14Q9NWM8 211 aa16.68■□□□□ 0.26
SMARCC2-210ENST00000550519 A0A0A6YYD4 124 aa16.67■□□□□ 0.26
SMARCC2-210ENST00000550519 ARPC1BO15143 372 aaKnown RBP16.67■□□□□ 0.26
SMARCC2-210ENST00000550519 SLC22A1O15245 554 aa16.67■□□□□ 0.26
SMARCC2-210ENST00000550519 SNRPBP14678 240 aaKnown RBP16.67■□□□□ 0.26
SMARCC2-210ENST00000550519 PSG5Q15238 335 aa16.67■□□□□ 0.26
SMARCC2-210ENST00000550519 RBM48Q5RL73 367 aaKnown RBP16.67■□□□□ 0.26
SMARCC2-210ENST00000550519 BPIFB6Q8NFQ5 453 aa16.67■□□□□ 0.26
SMARCC2-210ENST00000550519 SETD6Q8TBK2 473 aa16.67■□□□□ 0.26
SMARCC2-210ENST00000550519 CLCC1Q96S66 551 aa16.67■□□□□ 0.26
SMARCC2-210ENST00000550519 C11orf54Q9H0W9 315 aaPredicted RBP16.67■□□□□ 0.26
SMARCC2-210ENST00000550519 PLEKHJ1Q9NW61 149 aa16.67■□□□□ 0.26
SMARCC2-210ENST00000550519 METTL1Q9UBP6 276 aaKnown RBP16.67■□□□□ 0.26
SMARCC2-210ENST00000550519 TFAP2AP05549 437 aa16.66■□□□□ 0.26
SMARCC2-210ENST00000550519 LYL1P12980 280 aa16.66■□□□□ 0.26
SMARCC2-210ENST00000550519 CEACAM6P40199 344 aa16.66■□□□□ 0.26
SMARCC2-210ENST00000550519 TPPP2P59282 170 aa16.66■□□□□ 0.26
SMARCC2-210ENST00000550519 EDARADDQ8WWZ3 215 aa16.66■□□□□ 0.26
SMARCC2-210ENST00000550519 CITED4Q96RK1 184 aa16.66■□□□□ 0.26
SMARCC2-210ENST00000550519 TM2D3Q9BRN9 247 aa16.66■□□□□ 0.26
SMARCC2-210ENST00000550519 OR1A1Q9P1Q5 309 aa16.66■□□□□ 0.26
SMARCC2-210ENST00000550519 SPDEFO95238 335 aa16.65■□□□□ 0.26
SMARCC2-210ENST00000550519 CA2P00918 260 aa16.65■□□□□ 0.26
SMARCC2-210ENST00000550519 SRMP19623 302 aa16.65■□□□□ 0.26
SMARCC2-210ENST00000550519 ZBTB25P24278 435 aa16.65■□□□□ 0.26
SMARCC2-210ENST00000550519 CD40LGP29965 261 aa16.65■□□□□ 0.26
SMARCC2-210ENST00000550519 RNLSQ5VYX0 342 aa16.65■□□□□ 0.26
SMARCC2-210ENST00000550519 Q8N1Y9 231 aa16.65■□□□□ 0.26
SMARCC2-210ENST00000550519 DRAXINQ8NBI3 349 aaPredicted RBP16.65■□□□□ 0.26
SMARCC2-210ENST00000550519 PTX4Q96A99 478 aa16.65■□□□□ 0.26
SMARCC2-210ENST00000550519 HDHD3Q9BSH5 251 aaPredicted RBP16.65■□□□□ 0.26
SMARCC2-210ENST00000550519 TMED9Q9BVK6 235 aa16.65■□□□□ 0.26
SMARCC2-210ENST00000550519 LPAR5Q9H1C0 372 aa16.65■□□□□ 0.26
SMARCC2-210ENST00000550519 AK3Q9UIJ7 227 aa16.65■□□□□ 0.26
SMARCC2-210ENST00000550519 SOCS1O15524 211 aa16.64■□□□□ 0.25
SMARCC2-210ENST00000550519 BPNT1O95861 308 aa16.64■□□□□ 0.25
SMARCC2-210ENST00000550519 IGLV1-51P01701 117 aa16.64■□□□□ 0.25
SMARCC2-210ENST00000550519 IGKV1-16P04430 117 aa16.64■□□□□ 0.25
SMARCC2-210ENST00000550519 HLA-DRB3P79483 266 aa16.64■□□□□ 0.25
SMARCC2-210ENST00000550519 SRSF7Q16629 238 aaKnown RBP eCLIP16.64■□□□□ 0.25
SMARCC2-210ENST00000550519 FAM89BQ8N5H3 189 aa16.64■□□□□ 0.25
SMARCC2-210ENST00000550519 ZNF383Q8NA42 475 aa16.64■□□□□ 0.25
SMARCC2-210ENST00000550519 OR6M1Q8NGM8 313 aa16.64■□□□□ 0.25
SMARCC2-210ENST00000550519 TSNAXQ99598 290 aaKnown RBP16.64■□□□□ 0.25
SMARCC2-210ENST00000550519 ELOVL1Q9BW60 279 aa16.64■□□□□ 0.25
SMARCC2-210ENST00000550519 MGAT4AQ9UM21 535 aa16.64■□□□□ 0.25
SMARCC2-210ENST00000550519 STUB1Q9UNE7 303 aa16.64■□□□□ 0.25
SMARCC2-210ENST00000550519 SACSQ9NZJ4 4579 aa16.63■□□□□ 0.25
SMARCC2-210ENST00000550519 A8MZ25 164 aa16.63■□□□□ 0.25
SMARCC2-210ENST00000550519 EBAG9O00559 213 aa16.63■□□□□ 0.25
SMARCC2-210ENST00000550519 HSPA12AO43301 675 aa16.63■□□□□ 0.25
SMARCC2-210ENST00000550519 TRGV3P03979 118 aa16.63■□□□□ 0.25
SMARCC2-210ENST00000550519 UCHL1P09936 223 aa16.63■□□□□ 0.25
SMARCC2-210ENST00000550519 IGHV4-30-4P0DP06 118 aa16.63■□□□□ 0.25
SMARCC2-210ENST00000550519 CPEP16870 476 aa16.63■□□□□ 0.25
SMARCC2-210ENST00000550519 LINC00205P59089 165 aa16.63■□□□□ 0.25
SMARCC2-210ENST00000550519 HSD17B12Q53GQ0 312 aa16.63■□□□□ 0.25
SMARCC2-210ENST00000550519 CEACAM19Q7Z692 300 aa16.63■□□□□ 0.25
SMARCC2-210ENST00000550519 HAPLN4Q86UW8 402 aa16.63■□□□□ 0.25
SMARCC2-210ENST00000550519 MND1Q9BWT6 205 aa16.63■□□□□ 0.25
SMARCC2-210ENST00000550519 C19orf73Q9NVV2 129 aa16.63■□□□□ 0.25
SMARCC2-210ENST00000550519 FOXI3A8MTJ6 420 aaPredicted RBP16.62■□□□□ 0.25
SMARCC2-210ENST00000550519 CDK1P06493 297 aa16.62■□□□□ 0.25
SMARCC2-210ENST00000550519 SCTP09683 121 aa16.62■□□□□ 0.25
SMARCC2-210ENST00000550519 RPS16P62249 146 aaKnown RBP16.62■□□□□ 0.25
SMARCC2-210ENST00000550519 FXYD3Q14802 87 aa16.62■□□□□ 0.25
SMARCC2-210ENST00000550519 URM1Q9BTM9 101 aaKnown RBP16.62■□□□□ 0.25
SMARCC2-210ENST00000550519 RANGRFQ9HD47 186 aaPredicted RBP16.62■□□□□ 0.25
SMARCC2-210ENST00000550519 Q9N2K0 584 aa16.62■□□□□ 0.25
SMARCC2-210ENST00000550519 HSF4Q9ULV5 492 aa16.62■□□□□ 0.25
SMARCC2-210ENST00000550519 LSM2Q9Y333 95 aaKnown RBP16.62■□□□□ 0.25
SMARCC2-210ENST00000550519 H3BUA1 57 aa16.61■□□□□ 0.25
SMARCC2-210ENST00000550519 LDLRAD4O15165 306 aa16.61■□□□□ 0.25
SMARCC2-210ENST00000550519 TMEM50BP56557 158 aa16.61■□□□□ 0.25
SMARCC2-210ENST00000550519 SSBP2P81877 361 aaPredicted RBP16.61■□□□□ 0.25
SMARCC2-210ENST00000550519 PDPNQ86YL7 162 aa16.61■□□□□ 0.25
SMARCC2-210ENST00000550519 POC5Q8NA72 575 aa16.61■□□□□ 0.25
SMARCC2-210ENST00000550519 GRPEL2Q8TAA5 225 aa16.61■□□□□ 0.25
SMARCC2-210ENST00000550519 PALMDQ9NP74 551 aa16.61■□□□□ 0.25
SMARCC2-210ENST00000550519 C12orf4Q9NQ89 552 aa16.61■□□□□ 0.25
SMARCC2-210ENST00000550519 ZNF221Q9UK13 617 aa16.61■□□□□ 0.25
SMARCC2-210ENST00000550519 IGKV1-6A0A0C4DH72 117 aa16.6■□□□□ 0.25
SMARCC2-210ENST00000550519 SLC25A17O43808 307 aa16.6■□□□□ 0.25
SMARCC2-210ENST00000550519 ZP3P21754 424 aa16.6■□□□□ 0.25
SMARCC2-210ENST00000550519 SPHARQ15513 63 aa16.6■□□□□ 0.25
SMARCC2-210ENST00000550519 ANKRD13BQ86YJ7 626 aa16.6■□□□□ 0.25
SMARCC2-210ENST00000550519 GFI1Q99684 422 aa16.6■□□□□ 0.25
SMARCC2-210ENST00000550519 RSRP1Q9BUV0 290 aa16.6■□□□□ 0.25
SMARCC2-210ENST00000550519 EDA2RQ9HAV5 297 aa16.6■□□□□ 0.25
SMARCC2-210ENST00000550519 ZNF355PQ9NSJ1 428 aa16.6■□□□□ 0.25
SMARCC2-210ENST00000550519 LCE6AA0A183 80 aa16.59■□□□□ 0.25
SMARCC2-210ENST00000550519 APOA2P02652 100 aa16.59■□□□□ 0.25
SMARCC2-210ENST00000550519 ARSBP15848 533 aa16.59■□□□□ 0.25
SMARCC2-210ENST00000550519 KLF5Q13887 457 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms