RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 OR1L6Q8NGR2 347 aa8.75□□□□□ -1.01
SMARCC2-209ENST00000550164 LRRC29Q8WV35 223 aa8.75□□□□□ -1.01
SMARCC2-209ENST00000550164 ZNF552Q9H707 407 aaPredicted RBP8.75□□□□□ -1.01
SMARCC2-209ENST00000550164 NAGKQ9UJ70 344 aa8.75□□□□□ -1.01
SMARCC2-209ENST00000550164 FOXD3Q9UJU5 478 aaPredicted RBP8.75□□□□□ -1.01
SMARCC2-209ENST00000550164 DOCK11Q5JSL3 2073 aa8.75□□□□□ -1.01
SMARCC2-209ENST00000550164 GRIFINA4D1Z8 144 aa8.75□□□□□ -1.01
SMARCC2-209ENST00000550164 PATE3B3GLJ2 98 aa8.75□□□□□ -1.01
SMARCC2-209ENST00000550164 C3orf80F5H4A9 247 aa8.75□□□□□ -1.01
SMARCC2-209ENST00000550164 ZG16O60844 167 aa8.75□□□□□ -1.01
SMARCC2-209ENST00000550164 CFPP27918 469 aa8.75□□□□□ -1.01
SMARCC2-209ENST00000550164 CD1BP29016 333 aa8.75□□□□□ -1.01
SMARCC2-209ENST00000550164 CEBPDP49716 269 aaPredicted RBP8.75□□□□□ -1.01
SMARCC2-209ENST00000550164 CAMPP49913 170 aa8.75□□□□□ -1.01
SMARCC2-209ENST00000550164 SSPNQ14714 243 aa8.75□□□□□ -1.01
SMARCC2-209ENST00000550164 PCOLCEQ15113 449 aa8.75□□□□□ -1.01
SMARCC2-209ENST00000550164 PSG5Q15238 335 aa8.75□□□□□ -1.01
SMARCC2-209ENST00000550164 RNASEKQ6P5S7 137 aaKnown RBP8.75□□□□□ -1.01
SMARCC2-209ENST00000550164 OR8G5Q8NG78 346 aa8.75□□□□□ -1.01
SMARCC2-209ENST00000550164 RNF166Q96A37 237 aaPredicted RBP8.75□□□□□ -1.01
SMARCC2-209ENST00000550164 IGKV1-12A0A0C4DH73 117 aa8.74□□□□□ -1.01
SMARCC2-209ENST00000550164 OOEPA6NGQ2 149 aa8.74□□□□□ -1.01
SMARCC2-209ENST00000550164 SPRY3O43610 288 aa8.74□□□□□ -1.01
SMARCC2-209ENST00000550164 IGKV1D-12P01611 117 aa8.74□□□□□ -1.01
SMARCC2-209ENST00000550164 TRA2AQ13595 282 aaKnown RBP eCLIP8.74□□□□□ -1.012e-6■■■■□ 24.2
SMARCC2-209ENST00000550164 HLA-DRB5Q30154 266 aa8.74□□□□□ -1.01
SMARCC2-209ENST00000550164 MDP1Q86V88 176 aa8.74□□□□□ -1.01
SMARCC2-209ENST00000550164 SLC24A4Q8NFF2 622 aa8.74□□□□□ -1.01
SMARCC2-209ENST00000550164 OR1L1Q8NH94 360 aa8.74□□□□□ -1.01
SMARCC2-209ENST00000550164 CT55Q8WUE5 264 aa8.74□□□□□ -1.01
SMARCC2-209ENST00000550164 SH2D2AQ9NP31 389 aa8.74□□□□□ -1.01
SMARCC2-209ENST00000550164 FRMPD3Q5JV73 1810 aa8.74□□□□□ -1.01
SMARCC2-209ENST00000550164 CFHR1Q03591 330 aa8.74□□□□□ -1.01
SMARCC2-209ENST00000550164 TNFRSF9Q07011 255 aa8.74□□□□□ -1.01
SMARCC2-209ENST00000550164 RTL8BQ17RB0 113 aa8.74□□□□□ -1.01
SMARCC2-209ENST00000550164 RIPPLY2Q5TAB7 128 aa8.74□□□□□ -1.01
SMARCC2-209ENST00000550164 STARD4Q96DR4 205 aa8.74□□□□□ -1.01
SMARCC2-209ENST00000550164 POM121L2Q96KW2 1035 aa8.74□□□□□ -1.01
SMARCC2-209ENST00000550164 VPS25Q9BRG1 176 aa8.74□□□□□ -1.01
SMARCC2-209ENST00000550164 WDR61Q9GZS3 305 aaKnown RBP8.74□□□□□ -1.01
SMARCC2-209ENST00000550164 SDF2L1Q9HCN8 221 aa8.74□□□□□ -1.01
SMARCC2-209ENST00000550164 ZNF318Q5VUA4 2279 aa8.74□□□□□ -1.01
SMARCC2-209ENST00000550164 WIPF3A6NGB9 483 aa8.74□□□□□ -1.01
SMARCC2-209ENST00000550164 RPLP1P05386 114 aaKnown RBP8.74□□□□□ -1.01
SMARCC2-209ENST00000550164 ERHP84090 104 aaKnown RBP8.74□□□□□ -1.01
SMARCC2-209ENST00000550164 OR4X1Q8NH49 305 aa8.74□□□□□ -1.01
SMARCC2-209ENST00000550164 SLC25A40Q8TBP6 338 aa8.74□□□□□ -1.01
SMARCC2-209ENST00000550164 SLC45A2Q9UMX9 530 aa8.74□□□□□ -1.01
SMARCC2-209ENST00000550164 CHEK1O14757 476 aa8.73□□□□□ -1.01
SMARCC2-209ENST00000550164 COX7A2P2O60397 106 aa8.73□□□□□ -1.01
SMARCC2-209ENST00000550164 ZIC3O60481 467 aa8.73□□□□□ -1.01
SMARCC2-209ENST00000550164 SOD3P08294 240 aa8.73□□□□□ -1.01
SMARCC2-209ENST00000550164 RFPL3SP0C7P2 107 aa8.73□□□□□ -1.01
SMARCC2-209ENST00000550164 OR4D5Q8NGN0 318 aa8.73□□□□□ -1.01
SMARCC2-209ENST00000550164 SPTBN1Q01082 2364 aaKnown RBP8.73□□□□□ -1.01
SMARCC2-209ENST00000550164 PI4KAP42356 2102 aa8.73□□□□□ -1.01
SMARCC2-209ENST00000550164 AKAP6Q13023 2319 aa8.73□□□□□ -1.01
SMARCC2-209ENST00000550164 PTTG1IPP53801 180 aa8.73□□□□□ -1.01
SMARCC2-209ENST00000550164 ZNF826PQ6ZT77 177 aa8.73□□□□□ -1.01
SMARCC2-209ENST00000550164 LINC00596Q86U02 117 aa8.73□□□□□ -1.01
SMARCC2-209ENST00000550164 M0R1B8 84 aa8.73□□□□□ -1.01
SMARCC2-209ENST00000550164 LYL1P12980 280 aa8.73□□□□□ -1.01
SMARCC2-209ENST00000550164 DRAM1Q8N682 238 aa8.73□□□□□ -1.01
SMARCC2-209ENST00000550164 TCTEX1D1Q8N7M0 179 aa8.73□□□□□ -1.01
SMARCC2-209ENST00000550164 TMEM56Q96MV1 263 aa8.73□□□□□ -1.01
SMARCC2-209ENST00000550164 PSMG3Q9BT73 122 aaPredicted RBP8.73□□□□□ -1.01
SMARCC2-209ENST00000550164 PLSCR2Q9NRY7 297 aa8.73□□□□□ -1.01
SMARCC2-209ENST00000550164 TMEM56-RWDD3S4R434 201 aa8.73□□□□□ -1.01
SMARCC2-209ENST00000550164 ZNF407Q9C0G0 2248 aa8.73□□□□□ -1.01
SMARCC2-209ENST00000550164 TOX4O94842 621 aa8.73□□□□□ -1.01
SMARCC2-209ENST00000550164 HBZP02008 142 aa8.73□□□□□ -1.01
SMARCC2-209ENST00000550164 SNRPCP09234 159 aaKnown RBP8.73□□□□□ -1.01
SMARCC2-209ENST00000550164 CSRP1P21291 193 aaKnown RBP8.73□□□□□ -1.01
SMARCC2-209ENST00000550164 SRP14P37108 136 aaKnown RBP8.73□□□□□ -1.01
SMARCC2-209ENST00000550164 CYP2G1PQ6ZSU1 146 aa8.73□□□□□ -1.01
SMARCC2-209ENST00000550164 PRDM14Q9GZV8 571 aa8.73□□□□□ -1.01
SMARCC2-209ENST00000550164 ZNF835Q9Y2P0 537 aa8.73□□□□□ -1.01
SMARCC2-209ENST00000550164 IGKV1-27A0A075B6S5 117 aa8.72□□□□□ -1.01
SMARCC2-209ENST00000550164 S1PR2O95136 353 aa8.72□□□□□ -1.01
SMARCC2-209ENST00000550164 TNFSF15O95150 251 aa8.72□□□□□ -1.01
SMARCC2-209ENST00000550164 CTSSP25774 331 aa8.72□□□□□ -1.01
SMARCC2-209ENST00000550164 SUB1P53999 127 aaKnown RBP eCLIP8.72□□□□□ -1.018e-6■■■□□ 15.3
SMARCC2-209ENST00000550164 ID3Q02535 119 aa8.72□□□□□ -1.01
SMARCC2-209ENST00000550164 SLC25A53Q5H9E4 307 aa8.72□□□□□ -1.01
SMARCC2-209ENST00000550164 MIC13Q5XKP0 118 aa8.72□□□□□ -1.01
SMARCC2-209ENST00000550164 OR2M7Q8NG81 312 aa8.72□□□□□ -1.01
SMARCC2-209ENST00000550164 TMEM171Q8WVE6 324 aa8.72□□□□□ -1.01
SMARCC2-209ENST00000550164 DYNLRB1Q9NP97 96 aa8.72□□□□□ -1.01
SMARCC2-209ENST00000550164 PNRC2Q9NPJ4 139 aaKnown RBP8.72□□□□□ -1.01
SMARCC2-209ENST00000550164 LRRK1Q38SD2 2015 aa8.72□□□□□ -1.01
SMARCC2-209ENST00000550164 ABCA1O95477 2261 aa8.72□□□□□ -1.01
SMARCC2-209ENST00000550164 KIAA1671Q9BY89 1806 aa8.72□□□□□ -1.01
SMARCC2-209ENST00000550164 TRGV10A0A0A0MS01 117 aa8.72□□□□□ -1.01
SMARCC2-209ENST00000550164 HELTA6NFD8 242 aa8.72□□□□□ -1.01
SMARCC2-209ENST00000550164 CBY3A6NI87 242 aa8.72□□□□□ -1.01
SMARCC2-209ENST00000550164 E9PLN8 166 aa8.72□□□□□ -1.01
SMARCC2-209ENST00000550164 TMEM250H0YL14 139 aa8.72□□□□□ -1.01
SMARCC2-209ENST00000550164 M0QZK8 103 aa8.72□□□□□ -1.01
SMARCC2-209ENST00000550164 GGCTO75223 188 aaKnown RBP8.72□□□□□ -1.01
SMARCC2-209ENST00000550164 CXorf1O96002 111 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms