RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-223	ENST00000550160	POLQ	O75417	2590 aa		9.46	□□□□□ -0.89
CNOT2-223	ENST00000550160	LEUTX	A8MZ59	168 aa		9.46	□□□□□ -0.9
CNOT2-223	ENST00000550160	RNASEK-C17orf49	H0YIS7	233 aa		9.46	□□□□□ -0.9
CNOT2-223	ENST00000550160	BUB1B-PAK6	H3BSN5	160 aa		9.46	□□□□□ -0.9
CNOT2-223	ENST00000550160	MPPED1	O15442	326 aa		9.46	□□□□□ -0.9
CNOT2-223	ENST00000550160	TNFSF12	O43508	249 aa		9.46	□□□□□ -0.9
CNOT2-223	ENST00000550160	CREBL2	O60519	120 aa	Predicted RBP	9.46	□□□□□ -0.9
CNOT2-223	ENST00000550160	PGLYRP1	O75594	196 aa	Predicted RBP	9.46	□□□□□ -0.9
CNOT2-223	ENST00000550160	IFNA2	P01563	188 aa		9.46	□□□□□ -0.9
CNOT2-223	ENST00000550160	EPHA1	P21709	976 aa		9.46	□□□□□ -0.9
CNOT2-223	ENST00000550160	THBS3	P49746	956 aa		9.46	□□□□□ -0.9
CNOT2-223	ENST00000550160	ARHGDIB	P52566	201 aa		9.46	□□□□□ -0.9
CNOT2-223	ENST00000550160	ZNF137P	P52743	207 aa		9.46	□□□□□ -0.9
CNOT2-223	ENST00000550160	SRPX	P78539	464 aa		9.46	□□□□□ -0.9
CNOT2-223	ENST00000550160	MIDN	Q504T8	468 aa		9.46	□□□□□ -0.9
CNOT2-223	ENST00000550160	UTF1	Q5T230	341 aa		9.46	□□□□□ -0.9
CNOT2-223	ENST00000550160	MINOS1	Q5TGZ0	78 aa		9.46	□□□□□ -0.9
CNOT2-223	ENST00000550160	GLDN	Q6ZMI3	551 aa	Predicted RBP	9.46	□□□□□ -0.9
CNOT2-223	ENST00000550160		Q6ZNX1	250 aa		9.46	□□□□□ -0.9
CNOT2-223	ENST00000550160	LYG2	Q86SG7	212 aa		9.46	□□□□□ -0.9
CNOT2-223	ENST00000550160	TBC1D26	Q86UD7	250 aa		9.46	□□□□□ -0.9
CNOT2-223	ENST00000550160	TGIF2LX	Q8IUE1	241 aa		9.46	□□□□□ -0.9
CNOT2-223	ENST00000550160	TCTEX1D1	Q8N7M0	179 aa		9.46	□□□□□ -0.9
CNOT2-223	ENST00000550160	OR51H1	Q8NH63	302 aa		9.46	□□□□□ -0.9
CNOT2-223	ENST00000550160	TCTEX1D2	Q8WW35	142 aa		9.46	□□□□□ -0.9
CNOT2-223	ENST00000550160	NAA60	Q9H7X0	242 aa		9.46	□□□□□ -0.9
CNOT2-223	ENST00000550160	DPM3	Q9P2X0	92 aa		9.46	□□□□□ -0.9
CNOT2-223	ENST00000550160	TBL2	Q9Y4P3	447 aa	Known RBP	9.46	□□□□□ -0.9
CNOT2-223	ENST00000550160	MINOS1-NBL1	R4GNA1	71 aa		9.46	□□□□□ -0.9
CNOT2-223	ENST00000550160	HECTD1	Q9ULT8	2610 aa		9.46	□□□□□ -0.9
CNOT2-223	ENST00000550160	DCHS2	Q6V1P9	2916 aa		9.45	□□□□□ -0.9
CNOT2-223	ENST00000550160	UNC79	Q9P2D8	2635 aa		9.45	□□□□□ -0.9
CNOT2-223	ENST00000550160	LRBA	P50851	2863 aa		9.45	□□□□□ -0.9
CNOT2-223	ENST00000550160	TRAV40	A0A0B4J280	105 aa		9.45	□□□□□ -0.9
CNOT2-223	ENST00000550160	C3orf85	A0A1B0GTC6	90 aa		9.45	□□□□□ -0.9
CNOT2-223	ENST00000550160	SNRPGP15	A8MWD9	76 aa		9.45	□□□□□ -0.9
CNOT2-223	ENST00000550160	ODF3B	A8MYP8	253 aa		9.45	□□□□□ -0.9
CNOT2-223	ENST00000550160	OOSP1	A8MZH6	123 aa		9.45	□□□□□ -0.9
CNOT2-223	ENST00000550160	SFT2D2	O95562	160 aa		9.45	□□□□□ -0.9
CNOT2-223	ENST00000550160	IGLV2-14	P01704	120 aa		9.45	□□□□□ -0.9
CNOT2-223	ENST00000550160	APOA2	P02652	100 aa		9.45	□□□□□ -0.9
CNOT2-223	ENST00000550160	GAPDH	P04406	335 aa	Known RBP	9.45	□□□□□ -0.9
CNOT2-223	ENST00000550160	VSIG10L2	P0DP72	767 aa		9.45	□□□□□ -0.9
CNOT2-223	ENST00000550160	F2R	P25116	425 aa		9.45	□□□□□ -0.9
CNOT2-223	ENST00000550160	KIR2DS2	P43631	304 aa		9.45	□□□□□ -0.9
CNOT2-223	ENST00000550160	DLX1	P56177	255 aa		9.45	□□□□□ -0.9
CNOT2-223	ENST00000550160	TAGLN	Q01995	201 aa	Known RBP	9.45	□□□□□ -0.9
CNOT2-223	ENST00000550160	DHODH	Q02127	395 aa		9.45	□□□□□ -0.9
CNOT2-223	ENST00000550160	CBX3	Q13185	183 aa		9.45	□□□□□ -0.9
CNOT2-223	ENST00000550160	DHRS2	Q13268	280 aa		9.45	□□□□□ -0.9
CNOT2-223	ENST00000550160	PPP1R1A	Q13522	171 aa		9.45	□□□□□ -0.9
CNOT2-223	ENST00000550160	RPL39P5	Q59GN2	51 aa		9.45	□□□□□ -0.9
CNOT2-223	ENST00000550160	CCDC144NL	Q6NUI1	221 aa		9.45	□□□□□ -0.9
CNOT2-223	ENST00000550160	ZNF833P	Q6ZTB9	187 aa		9.45	□□□□□ -0.9
CNOT2-223	ENST00000550160	LDLRAD3	Q86YD5	345 aa		9.45	□□□□□ -0.9
CNOT2-223	ENST00000550160	CIART	Q8N365	385 aa	Predicted RBP	9.45	□□□□□ -0.9
CNOT2-223	ENST00000550160	OR4P4	Q8NGL7	312 aa		9.45	□□□□□ -0.9
CNOT2-223	ENST00000550160	COQ8A	Q8NI60	647 aa		9.45	□□□□□ -0.9
CNOT2-223	ENST00000550160	CD300LF	Q8TDQ1	290 aa		9.45	□□□□□ -0.9
CNOT2-223	ENST00000550160	ZNF431	Q8TF32	576 aa	Predicted RBP	9.45	□□□□□ -0.9
CNOT2-223	ENST00000550160	CAPSL	Q8WWF8	208 aa		9.45	□□□□□ -0.9
CNOT2-223	ENST00000550160	TMEM230	Q96A57	120 aa		9.45	□□□□□ -0.9
CNOT2-223	ENST00000550160	GALNT14	Q96FL9	552 aa		9.45	□□□□□ -0.9
CNOT2-223	ENST00000550160	PHB2	Q99623	299 aa		9.45	□□□□□ -0.9
CNOT2-223	ENST00000550160	UTP20	O75691	2785 aa	Known RBP	9.45	□□□□□ -0.9
CNOT2-223	ENST00000550160	ARHGAP32	A7KAX9	2087 aa		9.44	□□□□□ -0.9
CNOT2-223	ENST00000550160	MED13L	Q71F56	2210 aa		9.44	□□□□□ -0.9
CNOT2-223	ENST00000550160	IGHV1-69D	A0A0B4J2H0	117 aa		9.44	□□□□□ -0.9
CNOT2-223	ENST00000550160	CENPVL3	A0A0U1RRI6	287 aa		9.44	□□□□□ -0.9
CNOT2-223	ENST00000550160		A0A1W2PRD5	423 aa		9.44	□□□□□ -0.9
CNOT2-223	ENST00000550160		A0A1W2PRF3	423 aa		9.44	□□□□□ -0.9
CNOT2-223	ENST00000550160		A0A1W2PRM7	423 aa		9.44	□□□□□ -0.9
CNOT2-223	ENST00000550160	C9orf170	A2RU37	121 aa		9.44	□□□□□ -0.9
CNOT2-223	ENST00000550160	C7orf66	A4D0T2	115 aa		9.44	□□□□□ -0.9
CNOT2-223	ENST00000550160		H0Y980	276 aa		9.44	□□□□□ -0.9
CNOT2-223	ENST00000550160	NPFF	O15130	113 aa		9.44	□□□□□ -0.9
CNOT2-223	ENST00000550160	DUS4L	O95620	317 aa	Known RBP	9.44	□□□□□ -0.9
CNOT2-223	ENST00000550160	IGHV1-69	P01742	117 aa		9.44	□□□□□ -0.9
CNOT2-223	ENST00000550160	SERPINE2	P07093	398 aa		9.44	□□□□□ -0.9
CNOT2-223	ENST00000550160	DUT	P33316	252 aa	Known RBP	9.44	□□□□□ -0.9
CNOT2-223	ENST00000550160	BPIFB3	P59826	476 aa		9.44	□□□□□ -0.9
CNOT2-223	ENST00000550160	PRB3	Q04118	309 aa	Predicted RBP	9.44	□□□□□ -0.9
CNOT2-223	ENST00000550160	SLC9A3R2	Q15599	337 aa		9.44	□□□□□ -0.9
CNOT2-223	ENST00000550160	RTL8B	Q17RB0	113 aa		9.44	□□□□□ -0.9
CNOT2-223	ENST00000550160	TPTE2P1	Q5T6R2	138 aa		9.44	□□□□□ -0.9
CNOT2-223	ENST00000550160	HCP5	Q6MZN7	132 aa		9.44	□□□□□ -0.9
CNOT2-223	ENST00000550160	ODF3L1	Q8IXM7	274 aa		9.44	□□□□□ -0.9
CNOT2-223	ENST00000550160	PDZD9	Q8IXQ8	264 aa		9.44	□□□□□ -0.9
CNOT2-223	ENST00000550160	CASTOR1	Q8WTX7	329 aa		9.44	□□□□□ -0.9
CNOT2-223	ENST00000550160	C18orf12	Q96KH6	178 aa		9.44	□□□□□ -0.9
CNOT2-223	ENST00000550160	SEC22C	Q9BRL7	303 aa		9.44	□□□□□ -0.9
CNOT2-223	ENST00000550160	FAM212B	Q9NTI7	297 aa	Predicted RBP	9.44	□□□□□ -0.9
CNOT2-223	ENST00000550160	ZNRD1	Q9P1U0	126 aa		9.44	□□□□□ -0.9
CNOT2-223	ENST00000550160	ALG5	Q9Y673	324 aa		9.44	□□□□□ -0.9
CNOT2-223	ENST00000550160	SSNA1	O43805	119 aa		9.43	□□□□□ -0.9
CNOT2-223	ENST00000550160	CD5L	O43866	347 aa		9.43	□□□□□ -0.9
CNOT2-223	ENST00000550160	ATG12	O94817	140 aa		9.43	□□□□□ -0.9
CNOT2-223	ENST00000550160	OR5AC1	P0C628	307 aa		9.43	□□□□□ -0.9
CNOT2-223	ENST00000550160	RRAS	P10301	218 aa		9.43	□□□□□ -0.9
CNOT2-223	ENST00000550160	MC5R	P33032	325 aa		9.43	□□□□□ -0.9

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms