RNA–Protein interactions for RNA: ENST00000549341.1

DEPDC4-208, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-208ENST00000549341 DCAF12L2Q5VW00 463 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 STUMQ69YW2 141 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 ZNF660Q6AZW8 331 aaPredicted RBP5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 KCTD9Q7L273 389 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 LGI3Q8N145 548 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 PRR18Q8N4B5 295 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 CD177Q8N6Q3 437 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 OR11H7Q8NGC8 314 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 OR10V1Q8NGI7 309 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 OR52B4Q8NGK2 314 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 ANGPTL6Q8NI99 470 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 PLPPR1Q8TBJ4 325 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 SECTM1Q8WVN6 248 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 CAPSLQ8WWF8 208 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 RTN4IP1Q8WWV3 396 aaPredicted RBP5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 CCL17Q92583 94 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 ARL11Q969Q4 196 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 DMRTB1Q96MA1 342 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 RSRP1Q9BUV0 290 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 CHIAQ9BZP6 476 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 FXYD6Q9H0Q3 95 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 C5orf66Q9H5L9 145 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 NAA60Q9H7X0 242 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 METTL8Q9H825 291 aaKnown RBP5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 RAB18Q9NP72 206 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 ZFP57Q9NU63 452 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 KIF25Q9UIL4 384 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 EPPK1P58107 5090 aaKnown RBP5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 IGKV1D-17A0A075B6S4 117 aa5.84□□□□□ -1.47
DEPDC4-208ENST00000549341 A0A1W2PPH5 198 aa5.84□□□□□ -1.47
DEPDC4-208ENST00000549341 ODAMA1E959 279 aa5.84□□□□□ -1.47
DEPDC4-208ENST00000549341 CRYM-AS1A6NIL9 109 aa5.84□□□□□ -1.47
DEPDC4-208ENST00000549341 FAM25EA8MYX2 175 aa5.84□□□□□ -1.47
DEPDC4-208ENST00000549341 SIGLEC5O15389 551 aa5.84□□□□□ -1.47
DEPDC4-208ENST00000549341 PSPNO60542 156 aa5.84□□□□□ -1.47
DEPDC4-208ENST00000549341 TUSC2O75896 110 aa5.84□□□□□ -1.47
DEPDC4-208ENST00000549341 ATG12O94817 140 aa5.84□□□□□ -1.47
DEPDC4-208ENST00000549341 FSTL3O95633 263 aa5.84□□□□□ -1.47
DEPDC4-208ENST00000549341 GYPAP02724 150 aa5.84□□□□□ -1.47
DEPDC4-208ENST00000549341 PET100P0DJ07 73 aa5.84□□□□□ -1.47
DEPDC4-208ENST00000549341 HLA-GP17693 338 aa5.84□□□□□ -1.47
DEPDC4-208ENST00000549341 RCC1P18754 421 aaPredicted RBP5.84□□□□□ -1.47
DEPDC4-208ENST00000549341 NUP62P37198 522 aaPredicted RBP5.84□□□□□ -1.47
DEPDC4-208ENST00000549341 CEACAM6P40199 344 aa5.84□□□□□ -1.47
DEPDC4-208ENST00000549341 CEBPDP49716 269 aaPredicted RBP5.84□□□□□ -1.47
DEPDC4-208ENST00000549341 MRPS11P82912 194 aaKnown RBP5.84□□□□□ -1.47
DEPDC4-208ENST00000549341 HTD2P86397 168 aa5.84□□□□□ -1.47
DEPDC4-208ENST00000549341 MEF2CQ06413 473 aaPredicted RBP5.84□□□□□ -1.47
DEPDC4-208ENST00000549341 SLC9A3R2Q15599 337 aa5.84□□□□□ -1.47
DEPDC4-208ENST00000549341 MSMO1Q15800 293 aa5.84□□□□□ -1.47
DEPDC4-208ENST00000549341 IGSF11Q5DX21 431 aa5.84□□□□□ -1.47
DEPDC4-208ENST00000549341 ZNF788Q6ZQV5 615 aa5.84□□□□□ -1.47
DEPDC4-208ENST00000549341 H1FOOQ8IZA3 346 aaPredicted RBP5.84□□□□□ -1.47
DEPDC4-208ENST00000549341 DRAXINQ8NBI3 349 aaPredicted RBP5.84□□□□□ -1.47
DEPDC4-208ENST00000549341 ADAD2Q8NCV1 583 aaKnown RBP5.84□□□□□ -1.47
DEPDC4-208ENST00000549341 DEFB108BQ8NET1 73 aa5.84□□□□□ -1.47
DEPDC4-208ENST00000549341 OR5M8Q8NGP6 311 aa5.84□□□□□ -1.47
DEPDC4-208ENST00000549341 OR2T35Q8NGX2 323 aa5.84□□□□□ -1.47
DEPDC4-208ENST00000549341 MRGPRDQ8TDS7 321 aa5.84□□□□□ -1.47
DEPDC4-208ENST00000549341 RAB1CQ92928 201 aa5.84□□□□□ -1.47
DEPDC4-208ENST00000549341 GALNT14Q96FL9 552 aa5.84□□□□□ -1.47
DEPDC4-208ENST00000549341 FYTTD1Q96QD9 318 aaKnown RBP5.84□□□□□ -1.47
DEPDC4-208ENST00000549341 SPIN2AQ99865 258 aa5.84□□□□□ -1.47
DEPDC4-208ENST00000549341 SPIN2BQ9BPZ2 258 aa5.84□□□□□ -1.47
DEPDC4-208ENST00000549341 RTBDNQ9BSG5 229 aaPredicted RBP5.84□□□□□ -1.47
DEPDC4-208ENST00000549341 SLC2A9Q9NRM0 540 aa5.84□□□□□ -1.47
DEPDC4-208ENST00000549341 JPT1Q9UK76 154 aa5.84□□□□□ -1.47
DEPDC4-208ENST00000549341 UBE2J1Q9Y385 318 aaPredicted RBP5.84□□□□□ -1.47
DEPDC4-208ENST00000549341 YLPM1P49750 1951 aaKnown RBP5.84□□□□□ -1.48
DEPDC4-208ENST00000549341 DUXBA0A1W2PPF3 345 aa5.83□□□□□ -1.48
DEPDC4-208ENST00000549341 ZNF729A6NN14 1252 aaPredicted RBP5.83□□□□□ -1.48
DEPDC4-208ENST00000549341 C12orf77C9JDV5 145 aa5.83□□□□□ -1.48
DEPDC4-208ENST00000549341 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.83□□□□□ -1.48
DEPDC4-208ENST00000549341 MPPED1O15442 326 aa5.83□□□□□ -1.48
DEPDC4-208ENST00000549341 ADAM20O43506 726 aa5.83□□□□□ -1.48
DEPDC4-208ENST00000549341 ZNF737O75373 536 aa5.83□□□□□ -1.48
DEPDC4-208ENST00000549341 OR2A4O95047 310 aa5.83□□□□□ -1.48
DEPDC4-208ENST00000549341 HBZP02008 142 aa5.83□□□□□ -1.48
DEPDC4-208ENST00000549341 RLN2P04090 185 aa5.83□□□□□ -1.48
DEPDC4-208ENST00000549341 NDUFB7P17568 137 aa5.83□□□□□ -1.48
DEPDC4-208ENST00000549341 PI3P19957 117 aa5.83□□□□□ -1.48
DEPDC4-208ENST00000549341 RAB7AP51149 207 aa5.83□□□□□ -1.48
DEPDC4-208ENST00000549341 LMO4P61968 165 aa5.83□□□□□ -1.48
DEPDC4-208ENST00000549341 CATR1Q13166 79 aa5.83□□□□□ -1.48
DEPDC4-208ENST00000549341 SMCO1Q147U7 214 aa5.83□□□□□ -1.48
DEPDC4-208ENST00000549341 PHLDA2Q53GA4 152 aa5.83□□□□□ -1.48
DEPDC4-208ENST00000549341 ESCO2Q56NI9 601 aa5.83□□□□□ -1.48
DEPDC4-208ENST00000549341 NLRC3Q7RTR2 1065 aa5.83□□□□□ -1.48
DEPDC4-208ENST00000549341 ZNF695Q8IW36 515 aa5.83□□□□□ -1.48
DEPDC4-208ENST00000549341 TCTEX1D1Q8N7M0 179 aa5.83□□□□□ -1.48
DEPDC4-208ENST00000549341 OR10A7Q8NGE5 316 aa5.83□□□□□ -1.48
DEPDC4-208ENST00000549341 THAP6Q8TBB0 222 aa5.83□□□□□ -1.48
DEPDC4-208ENST00000549341 MRGPRFQ96AM1 343 aa5.83□□□□□ -1.48
DEPDC4-208ENST00000549341 COQ2Q96H96 371 aa5.83□□□□□ -1.48
DEPDC4-208ENST00000549341 OR2A7Q96R45 310 aa5.83□□□□□ -1.48
DEPDC4-208ENST00000549341 CCL13Q99616 98 aa5.83□□□□□ -1.48
DEPDC4-208ENST00000549341 GAL3ST2Q9H3Q3 398 aa5.83□□□□□ -1.48
DEPDC4-208ENST00000549341 OR2S2Q9NQN1 319 aa5.83□□□□□ -1.48
DEPDC4-208ENST00000549341 LIN7CQ9NUP9 197 aaKnown RBP5.83□□□□□ -1.48
DEPDC4-208ENST00000549341 RDH8Q9NYR8 311 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 201.3 ms