RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 ARG2P78540 354 aa10.05□□□□□ -0.8
RAPGEF3-219ENST00000549151 TBC1D28Q2M2D7 210 aa10.05□□□□□ -0.8
RAPGEF3-219ENST00000549151 ZNF497Q6ZNH5 498 aa10.05□□□□□ -0.8
RAPGEF3-219ENST00000549151 LINC00596Q86U02 117 aa10.05□□□□□ -0.8
RAPGEF3-219ENST00000549151 SLC25A40Q8TBP6 338 aa10.05□□□□□ -0.8
RAPGEF3-219ENST00000549151 ELOVL1Q9BW60 279 aa10.05□□□□□ -0.8
RAPGEF3-219ENST00000549151 B4DEV8 164 aa10.05□□□□□ -0.8
RAPGEF3-219ENST00000549151 SH2D1BO14796 132 aa10.05□□□□□ -0.8
RAPGEF3-219ENST00000549151 SS18L1O75177 396 aaPredicted RBP10.05□□□□□ -0.8
RAPGEF3-219ENST00000549151 RAC2P15153 192 aa10.05□□□□□ -0.8
RAPGEF3-219ENST00000549151 UBE2NP61088 152 aaKnown RBP10.05□□□□□ -0.8
RAPGEF3-219ENST00000549151 MEF2BQ02080 365 aaPredicted RBP10.05□□□□□ -0.8
RAPGEF3-219ENST00000549151 TNFRSF9Q07011 255 aa10.05□□□□□ -0.8
RAPGEF3-219ENST00000549151 TFF3Q07654 80 aa10.05□□□□□ -0.8
RAPGEF3-219ENST00000549151 PNRC1Q12796 327 aaPredicted RBP10.05□□□□□ -0.8
RAPGEF3-219ENST00000549151 SLC10A1Q14973 349 aa10.05□□□□□ -0.8
RAPGEF3-219ENST00000549151 MBD3L1Q8WWY6 194 aa10.05□□□□□ -0.8
RAPGEF3-219ENST00000549151 GTF3AQ92664 365 aaKnown RBP10.05□□□□□ -0.8
RAPGEF3-219ENST00000549151 PACRGQ96M98 296 aaPredicted RBP10.05□□□□□ -0.8
RAPGEF3-219ENST00000549151 ARRDC1-AS1Q9H2J1 176 aa10.05□□□□□ -0.8
RAPGEF3-219ENST00000549151 ROS1P08922 2347 aa10.05□□□□□ -0.8
RAPGEF3-219ENST00000549151 CD81P60033 236 aa10.04□□□□□ -0.8
RAPGEF3-219ENST00000549151 SERF2P84101 59 aa10.04□□□□□ -0.8
RAPGEF3-219ENST00000549151 FFAR4Q5NUL3 377 aa10.04□□□□□ -0.8
RAPGEF3-219ENST00000549151 FBXW9Q5XUX1 488 aa10.04□□□□□ -0.8
RAPGEF3-219ENST00000549151 SSX9Q7RTT3 188 aa10.04□□□□□ -0.8
RAPGEF3-219ENST00000549151 OR10G4Q8NGN3 311 aa10.04□□□□□ -0.8
RAPGEF3-219ENST00000549151 OR10G9Q8NGN4 311 aa10.04□□□□□ -0.8
RAPGEF3-219ENST00000549151 OR10G7Q8NGN6 311 aa10.04□□□□□ -0.8
RAPGEF3-219ENST00000549151 NINJ1Q92982 152 aa10.04□□□□□ -0.8
RAPGEF3-219ENST00000549151 CDX2Q99626 313 aaPredicted RBP10.04□□□□□ -0.8
RAPGEF3-219ENST00000549151 PKIBQ9C010 78 aa10.04□□□□□ -0.8
RAPGEF3-219ENST00000549151 TREM2Q9NZC2 230 aa10.04□□□□□ -0.8
RAPGEF3-219ENST00000549151 C17orf98A8MV24 154 aa10.04□□□□□ -0.8
RAPGEF3-219ENST00000549151 SOX15O60248 233 aa10.04□□□□□ -0.8
RAPGEF3-219ENST00000549151 HAND1O96004 215 aa10.04□□□□□ -0.8
RAPGEF3-219ENST00000549151 UBE2G2P60604 165 aa10.04□□□□□ -0.8
RAPGEF3-219ENST00000549151 RNPS1Q15287 305 aaKnown RBP10.04□□□□□ -0.8
RAPGEF3-219ENST00000549151 TMEM241Q24JQ0 296 aa10.04□□□□□ -0.8
RAPGEF3-219ENST00000549151 NANOS1Q8WY41 292 aaKnown RBP10.04□□□□□ -0.8
RAPGEF3-219ENST00000549151 PSMG3Q9BT73 122 aaPredicted RBP10.04□□□□□ -0.8
RAPGEF3-219ENST00000549151 OPA3Q9H6K4 179 aa10.04□□□□□ -0.8
RAPGEF3-219ENST00000549151 POLDIP2Q9Y2S7 368 aa10.04□□□□□ -0.8
RAPGEF3-219ENST00000549151 GVINP1Q7Z2Y8 2422 aa10.04□□□□□ -0.8
RAPGEF3-219ENST00000549151 TRBV6-6A0A0A6YYG2 114 aa10.04□□□□□ -0.8
RAPGEF3-219ENST00000549151 ODAMA1E959 279 aa10.04□□□□□ -0.8
RAPGEF3-219ENST00000549151 SMCO3A2RU48 225 aa10.04□□□□□ -0.8
RAPGEF3-219ENST00000549151 ZNF729A6NN14 1252 aaPredicted RBP10.04□□□□□ -0.8
RAPGEF3-219ENST00000549151 C12orf77C9JDV5 145 aa10.04□□□□□ -0.8
RAPGEF3-219ENST00000549151 H7BYZ3 331 aa10.04□□□□□ -0.8
RAPGEF3-219ENST00000549151 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.04□□□□□ -0.8
RAPGEF3-219ENST00000549151 AGFG2O95081 481 aa10.04□□□□□ -0.8
RAPGEF3-219ENST00000549151 PTBP3O95758 552 aaKnown RBP10.04□□□□□ -0.8
RAPGEF3-219ENST00000549151 CRYAAP02489 173 aa10.04□□□□□ -0.8
RAPGEF3-219ENST00000549151 SLC25A6P12236 298 aa10.04□□□□□ -0.8
RAPGEF3-219ENST00000549151 PSMB3P49720 205 aa10.04□□□□□ -0.8
RAPGEF3-219ENST00000549151 BSXQ3C1V8 233 aa10.04□□□□□ -0.8
RAPGEF3-219ENST00000549151 TMEM164Q5U3C3 297 aa10.04□□□□□ -0.8
RAPGEF3-219ENST00000549151 UBALD2Q8IYN6 164 aa10.04□□□□□ -0.8
RAPGEF3-219ENST00000549151 TMEM37Q8WXS4 190 aa10.04□□□□□ -0.8
RAPGEF3-219ENST00000549151 PINX1Q96BK5 328 aaKnown RBP10.04□□□□□ -0.8
RAPGEF3-219ENST00000549151 GALMQ96C23 342 aa10.04□□□□□ -0.8
RAPGEF3-219ENST00000549151 SDSLQ96GA7 329 aa10.04□□□□□ -0.8
RAPGEF3-219ENST00000549151 A0A1W2PNU3 283 aaPredicted RBP10.03□□□□□ -0.8
RAPGEF3-219ENST00000549151 PAGE4O60829 102 aa10.03□□□□□ -0.8
RAPGEF3-219ENST00000549151 EDDM3AQ14507 147 aa10.03□□□□□ -0.8
RAPGEF3-219ENST00000549151 C21orf62-AS1Q17RA5 79 aa10.03□□□□□ -0.8
RAPGEF3-219ENST00000549151 PRAMEF6Q5VXH4 476 aa10.03□□□□□ -0.8
RAPGEF3-219ENST00000549151 ZNF709Q8N972 641 aa10.03□□□□□ -0.8
RAPGEF3-219ENST00000549151 CNEP1R1Q8N9A8 125 aa10.03□□□□□ -0.8
RAPGEF3-219ENST00000549151 OR10A7Q8NGE5 316 aa10.03□□□□□ -0.8
RAPGEF3-219ENST00000549151 OR4X1Q8NH49 305 aa10.03□□□□□ -0.8
RAPGEF3-219ENST00000549151 BCL2L2Q92843 193 aaPredicted RBP10.03□□□□□ -0.8
RAPGEF3-219ENST00000549151 DCTN5Q9BTE1 182 aa10.03□□□□□ -0.8
RAPGEF3-219ENST00000549151 PHOX2AO14813 284 aa10.03□□□□□ -0.8
RAPGEF3-219ENST00000549151 GALR2O43603 387 aaPredicted RBP10.03□□□□□ -0.8
RAPGEF3-219ENST00000549151 OPN1MWP04001 364 aa10.03□□□□□ -0.8
RAPGEF3-219ENST00000549151 SP1P08047 785 aa10.03□□□□□ -0.8
RAPGEF3-219ENST00000549151 OPN1MW2P0DN77 364 aa10.03□□□□□ -0.8
RAPGEF3-219ENST00000549151 OPN1MW3P0DN78 364 aa10.03□□□□□ -0.8
RAPGEF3-219ENST00000549151 SSTR5P35346 364 aa10.03□□□□□ -0.8
RAPGEF3-219ENST00000549151 UNQ6494/PRO21346Q6UXR6 183 aa10.03□□□□□ -0.8
RAPGEF3-219ENST00000549151 MOB1BQ7L9L4 216 aa10.03□□□□□ -0.8
RAPGEF3-219ENST00000549151 C1orf210Q8IVY1 113 aa10.03□□□□□ -0.8
RAPGEF3-219ENST00000549151 OR5B12Q96R08 314 aa10.03□□□□□ -0.8
RAPGEF3-219ENST00000549151 PCGF1Q9BSM1 259 aa10.03□□□□□ -0.8
RAPGEF3-219ENST00000549151 PARLQ9H300 379 aa10.03□□□□□ -0.8
RAPGEF3-219ENST00000549151 NAT8Q9UHE5 227 aa10.03□□□□□ -0.8
RAPGEF3-219ENST00000549151 CFAP47Q6ZTR5 3102 aa10.03□□□□□ -0.8
RAPGEF3-219ENST00000549151 TECTAO75443 2155 aa10.03□□□□□ -0.8
RAPGEF3-219ENST00000549151 SMPD2O60906 423 aa10.02□□□□□ -0.8
RAPGEF3-219ENST00000549151 HBZP02008 142 aa10.02□□□□□ -0.8
RAPGEF3-219ENST00000549151 CHRNA7P36544 502 aa10.02□□□□□ -0.8
RAPGEF3-219ENST00000549151 GALR1P47211 349 aa10.02□□□□□ -0.8
RAPGEF3-219ENST00000549151 FABP6P51161 128 aa10.02□□□□□ -0.8
RAPGEF3-219ENST00000549151 COL10A1Q03692 680 aa10.02□□□□□ -0.8
RAPGEF3-219ENST00000549151 PSG7Q13046 419 aa10.02□□□□□ -0.8
RAPGEF3-219ENST00000549151 MSMO1Q15800 293 aa10.02□□□□□ -0.8
RAPGEF3-219ENST00000549151 RNFT1Q5M7Z0 435 aa10.02□□□□□ -0.8
RAPGEF3-219ENST00000549151 ZNF66Q6ZN08 573 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms