RNA–Protein interactions for RNA: ENST00000546893.5

SLC38A1-204, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 2,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-204ENST00000546893 ACTL10Q5JWF8 245 aa11.66□□□□□ -0.54
SLC38A1-204ENST00000546893 ZFP62Q8NB50 900 aaPredicted RBP11.66□□□□□ -0.54
SLC38A1-204ENST00000546893 PLPPR1Q8TBJ4 325 aa11.66□□□□□ -0.54
SLC38A1-204ENST00000546893 MRPL30Q8TCC3 161 aaKnown RBP11.66□□□□□ -0.54
SLC38A1-204ENST00000546893 ABHD3Q8WU67 409 aa11.66□□□□□ -0.54
SLC38A1-204ENST00000546893 TMEM171Q8WVE6 324 aa11.66□□□□□ -0.54
SLC38A1-204ENST00000546893 NANOS1Q8WY41 292 aaKnown RBP11.66□□□□□ -0.54
SLC38A1-204ENST00000546893 OR5P3Q8WZ94 311 aa11.66□□□□□ -0.54
SLC38A1-204ENST00000546893 TNRC6AQ8NDV7 1962 aaKnown RBP11.66□□□□□ -0.54
SLC38A1-204ENST00000546893 RNF212BA8MTL3 300 aa11.66□□□□□ -0.54
SLC38A1-204ENST00000546893 CHST1O43916 411 aa11.66□□□□□ -0.54
SLC38A1-204ENST00000546893 NUPR1O60356 82 aa11.66□□□□□ -0.54
SLC38A1-204ENST00000546893 NBEAP1P0C6P0 100 aa11.66□□□□□ -0.54
SLC38A1-204ENST00000546893 ACP1P24666 158 aa11.66□□□□□ -0.54
SLC38A1-204ENST00000546893 GPM6AP51674 278 aa11.66□□□□□ -0.54
SLC38A1-204ENST00000546893 ERVS71-1P61550 626 aa11.66□□□□□ -0.54
SLC38A1-204ENST00000546893 TMEM183BQ1AE95 376 aa11.66□□□□□ -0.54
SLC38A1-204ENST00000546893 CXorf66Q5JRM2 361 aaPredicted RBP11.66□□□□□ -0.54
SLC38A1-204ENST00000546893 TGIF2LYQ8IUE0 185 aa11.66□□□□□ -0.54
SLC38A1-204ENST00000546893 OR4C5Q8NGB2 326 aa11.66□□□□□ -0.54
SLC38A1-204ENST00000546893 SCGB1C1Q8TD33 95 aa11.66□□□□□ -0.54
SLC38A1-204ENST00000546893 STRADBQ9C0K7 418 aa11.66□□□□□ -0.54
SLC38A1-204ENST00000546893 MTCH1Q9NZJ7 389 aa11.66□□□□□ -0.54
SLC38A1-204ENST00000546893 COX11Q9Y6N1 276 aa11.66□□□□□ -0.54
SLC38A1-204ENST00000546893 A0A1B0GUS0 222 aa11.65□□□□□ -0.54
SLC38A1-204ENST00000546893 IFNA1P01562 189 aa11.65□□□□□ -0.54
SLC38A1-204ENST00000546893 TUBG1P23258 451 aa11.65□□□□□ -0.54
SLC38A1-204ENST00000546893 UBE2G2P60604 165 aa11.65□□□□□ -0.54
SLC38A1-204ENST00000546893 RSPO4Q2I0M5 234 aaPredicted RBP11.65□□□□□ -0.54
SLC38A1-204ENST00000546893 FBLN7Q53RD9 439 aa11.65□□□□□ -0.54
SLC38A1-204ENST00000546893 OCIAD2Q56VL3 154 aa11.65□□□□□ -0.54
SLC38A1-204ENST00000546893 ZNF324BQ6AW86 544 aaPredicted RBP11.65□□□□□ -0.54
SLC38A1-204ENST00000546893 TMEM256Q8N2U0 113 aa11.65□□□□□ -0.54
SLC38A1-204ENST00000546893 APH1AQ96BI3 265 aa11.65□□□□□ -0.54
SLC38A1-204ENST00000546893 CCL28Q9NRJ3 127 aa11.65□□□□□ -0.54
SLC38A1-204ENST00000546893 LIN7CQ9NUP9 197 aaKnown RBP11.65□□□□□ -0.54
SLC38A1-204ENST00000546893 CISD1Q9NZ45 108 aaKnown RBP11.65□□□□□ -0.54
SLC38A1-204ENST00000546893 ASCC3Q8N3C0 2202 aaKnown RBP11.65□□□□□ -0.54
SLC38A1-204ENST00000546893 EML6Q6ZMW3 1958 aa11.65□□□□□ -0.54
SLC38A1-204ENST00000546893 C5orf49A4QMS7 147 aa11.65□□□□□ -0.54
SLC38A1-204ENST00000546893 CD300LBA8K4G0 201 aa11.65□□□□□ -0.54
SLC38A1-204ENST00000546893 F6UZH7 168 aa11.65□□□□□ -0.54
SLC38A1-204ENST00000546893 ZNF205O95201 554 aa11.65□□□□□ -0.54
SLC38A1-204ENST00000546893 GLI4P10075 376 aa11.65□□□□□ -0.54
SLC38A1-204ENST00000546893 LHX2P50458 406 aa11.65□□□□□ -0.54
SLC38A1-204ENST00000546893 Q0VFX4 171 aa11.65□□□□□ -0.54
SLC38A1-204ENST00000546893 LDLRAD2Q5SZI1 272 aa11.65□□□□□ -0.54
SLC38A1-204ENST00000546893 PCSK4Q6UW60 755 aa11.65□□□□□ -0.54
SLC38A1-204ENST00000546893 UNQ5815/PRO19632Q6UWF5 114 aa11.65□□□□□ -0.54
SLC38A1-204ENST00000546893 MBD3L1Q8WWY6 194 aa11.65□□□□□ -0.54
SLC38A1-204ENST00000546893 POM121L2Q96KW2 1035 aa11.65□□□□□ -0.54
SLC38A1-204ENST00000546893 ZNF703Q9H7S9 590 aaPredicted RBP11.65□□□□□ -0.54
SLC38A1-204ENST00000546893 GP6Q9HCN6 339 aa11.65□□□□□ -0.54
SLC38A1-204ENST00000546893 SDF2L1Q9HCN8 221 aa11.65□□□□□ -0.54
SLC38A1-204ENST00000546893 LOC102723971A0A1B0GUV8 181 aa11.64□□□□□ -0.55
SLC38A1-204ENST00000546893 MSMO1Q15800 293 aa11.64□□□□□ -0.55
SLC38A1-204ENST00000546893 FAM58AQ8N1B3 248 aa11.64□□□□□ -0.55
SLC38A1-204ENST00000546893 SUMF1Q8NBK3 374 aa11.64□□□□□ -0.55
SLC38A1-204ENST00000546893 NECAP1Q8NC96 275 aa11.64□□□□□ -0.55
SLC38A1-204ENST00000546893 ZBTB34Q8NCN2 500 aa11.64□□□□□ -0.55
SLC38A1-204ENST00000546893 OR2M7Q8NG81 312 aa11.64□□□□□ -0.55
SLC38A1-204ENST00000546893 OR2D3Q8NGH3 330 aa11.64□□□□□ -0.55
SLC38A1-204ENST00000546893 OR10V1Q8NGI7 309 aa11.64□□□□□ -0.55
SLC38A1-204ENST00000546893 CTDSP1Q9GZU7 261 aa11.64□□□□□ -0.55
SLC38A1-204ENST00000546893 MAGT1Q9H0U3 335 aa11.64□□□□□ -0.55
SLC38A1-204ENST00000546893 ZNF552Q9H707 407 aaPredicted RBP11.64□□□□□ -0.55
SLC38A1-204ENST00000546893 DEPPQ9NTK1 212 aa11.64□□□□□ -0.55
SLC38A1-204ENST00000546893 TAAR3PQ9P1P4 343 aa11.64□□□□□ -0.55
SLC38A1-204ENST00000546893 IGKV1D-13A0A0B4J2D9 117 aa11.64□□□□□ -0.55
SLC38A1-204ENST00000546893 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.64□□□□□ -0.55
SLC38A1-204ENST00000546893 J3QT63 122 aa11.64□□□□□ -0.55
SLC38A1-204ENST00000546893 ZNF883P0CG24 379 aa11.64□□□□□ -0.55
SLC38A1-204ENST00000546893 IGKV1-13P0DP09 117 aa11.64□□□□□ -0.55
SLC38A1-204ENST00000546893 PAX9P55771 341 aa11.64□□□□□ -0.55
SLC38A1-204ENST00000546893 CLDN18P56856 261 aa11.64□□□□□ -0.55
SLC38A1-204ENST00000546893 RPS18P62269 152 aaKnown RBP11.64□□□□□ -0.55
SLC38A1-204ENST00000546893 RAB11AP62491 216 aa11.64□□□□□ -0.55
SLC38A1-204ENST00000546893 SLC23A3Q6PIS1 610 aa11.64□□□□□ -0.55
SLC38A1-204ENST00000546893 ZNF845Q96IR2 970 aaPredicted RBP11.64□□□□□ -0.55
SLC38A1-204ENST00000546893 VAMP8Q9BV40 100 aa11.64□□□□□ -0.55
SLC38A1-204ENST00000546893 CST9LQ9H4G1 147 aa11.64□□□□□ -0.55
SLC38A1-204ENST00000546893 TMEM106BQ9NUM4 274 aa11.64□□□□□ -0.55
SLC38A1-204ENST00000546893 POLDIP2Q9Y2S7 368 aa11.64□□□□□ -0.55
SLC38A1-204ENST00000546893 RBM7Q9Y580 266 aaKnown RBP11.64□□□□□ -0.55
SLC38A1-204ENST00000546893 TIMM9Q9Y5J7 89 aa11.64□□□□□ -0.55
SLC38A1-204ENST00000546893 IGHV2OR16-5A0A0B4J2B6 119 aa11.63□□□□□ -0.55
SLC38A1-204ENST00000546893 ZNF320A2RRD8 509 aa11.63□□□□□ -0.55
SLC38A1-204ENST00000546893 OMGP23515 440 aa11.63□□□□□ -0.55
SLC38A1-204ENST00000546893 CDC34P49427 236 aaPredicted RBP11.63□□□□□ -0.55
SLC38A1-204ENST00000546893 ASCL1P50553 236 aa11.63□□□□□ -0.55
SLC38A1-204ENST00000546893 FAM3BP58499 235 aaPredicted RBP11.63□□□□□ -0.55
SLC38A1-204ENST00000546893 Q6ZWC4 215 aa11.63□□□□□ -0.55
SLC38A1-204ENST00000546893 ZNF738Q8NE65 137 aa11.63□□□□□ -0.55
SLC38A1-204ENST00000546893 CT55Q8WUE5 264 aa11.63□□□□□ -0.55
SLC38A1-204ENST00000546893 ZNF430Q9H8G1 570 aaPredicted RBP11.63□□□□□ -0.55
SLC38A1-204ENST00000546893 HSPB7Q9UBY9 170 aa11.63□□□□□ -0.55
SLC38A1-204ENST00000546893 TRIOO75962 3097 aa11.63□□□□□ -0.55
SLC38A1-204ENST00000546893 MYO7BQ6PIF6 2116 aa11.63□□□□□ -0.55
SLC38A1-204ENST00000546893 IGKV1-6A0A0C4DH72 117 aa11.63□□□□□ -0.55
SLC38A1-204ENST00000546893 SYNGR2O43760 224 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms