RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 GPHA2Q96T91 129 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 GINS4Q9BRT9 223 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 ST6GALNAC5Q9BVH7 336 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 PARP12Q9H0J9 701 aaKnown RBP5.12□□□□□ -1.59
PRKDC-211ENST00000546304 IFI27L2Q9H2X8 130 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 RABL2AQ9UBK7 228 aaPredicted RBP5.12□□□□□ -1.59
PRKDC-211ENST00000546304 RABL2BQ9UNT1 228 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 MINOS1-NBL1R4GNA1 71 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 V9GYH0 126 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 TRBV6-7A0A0A0MS04 114 aa5.11□□□□□ -1.59
PRKDC-211ENST00000546304 A0A1W2PRX2 142 aa5.11□□□□□ -1.59
PRKDC-211ENST00000546304 FABP12A6NFH5 140 aa5.11□□□□□ -1.59
PRKDC-211ENST00000546304 BUB1B-PAK6H3BSN5 160 aa5.11□□□□□ -1.59
PRKDC-211ENST00000546304 GABARAPH6UMI1 98 aa5.11□□□□□ -1.59
PRKDC-211ENST00000546304 HSD17B6O14756 317 aa5.11□□□□□ -1.59
PRKDC-211ENST00000546304 CTDSPLO15194 276 aa5.11□□□□□ -1.59
PRKDC-211ENST00000546304 YPEL1O60688 119 aa5.11□□□□□ -1.59
PRKDC-211ENST00000546304 CTXN2P0C2S0 81 aa5.11□□□□□ -1.59
PRKDC-211ENST00000546304 IL3RAP26951 378 aa5.11□□□□□ -1.59
PRKDC-211ENST00000546304 CEACAM3P40198 252 aa5.11□□□□□ -1.59
PRKDC-211ENST00000546304 ETV6P41212 452 aa5.11□□□□□ -1.59
PRKDC-211ENST00000546304 ZNF137PP52743 207 aa5.11□□□□□ -1.59
PRKDC-211ENST00000546304 PRRX1P54821 245 aa5.11□□□□□ -1.59
PRKDC-211ENST00000546304 TAS2R46P59540 309 aa5.11□□□□□ -1.59
PRKDC-211ENST00000546304 ZNF79Q15937 498 aa5.11□□□□□ -1.59
PRKDC-211ENST00000546304 DEFB112Q30KQ8 113 aa5.11□□□□□ -1.59
PRKDC-211ENST00000546304 MORN2Q502X0 79 aa5.11□□□□□ -1.59
PRKDC-211ENST00000546304 PLA1AQ53H76 456 aa5.11□□□□□ -1.59
PRKDC-211ENST00000546304 LY6G6FQ5SQ64 297 aa5.11□□□□□ -1.59
PRKDC-211ENST00000546304 LDLRAD2Q5SZI1 272 aa5.11□□□□□ -1.59
PRKDC-211ENST00000546304 SLC25A48Q6ZT89 311 aaKnown RBP5.11□□□□□ -1.59
PRKDC-211ENST00000546304 CCDC190Q86UF4 302 aa5.11□□□□□ -1.59
PRKDC-211ENST00000546304 LDLRAD3Q86YD5 345 aa5.11□□□□□ -1.59
PRKDC-211ENST00000546304 LINC00311Q8N616 119 aa5.11□□□□□ -1.59
PRKDC-211ENST00000546304 SIGLECL1Q8N7X8 197 aa5.11□□□□□ -1.59
PRKDC-211ENST00000546304 OR52I2Q8NH67 350 aa5.11□□□□□ -1.59
PRKDC-211ENST00000546304 OR10J5Q8NHC4 309 aa5.11□□□□□ -1.59
PRKDC-211ENST00000546304 ZNF418Q8TF45 676 aaPredicted RBP5.11□□□□□ -1.59
PRKDC-211ENST00000546304 TOMM40LQ969M1 308 aa5.11□□□□□ -1.59
PRKDC-211ENST00000546304 RPEQ96AT9 228 aa5.11□□□□□ -1.59
PRKDC-211ENST00000546304 CREB3L1Q96BA8 519 aa5.11□□□□□ -1.59
PRKDC-211ENST00000546304 ZNF48Q96MX3 618 aaPredicted RBP5.11□□□□□ -1.59
PRKDC-211ENST00000546304 YPEL2Q96QA6 119 aa5.11□□□□□ -1.59
PRKDC-211ENST00000546304 NECAP2Q9NVZ3 263 aa5.11□□□□□ -1.59
PRKDC-211ENST00000546304 RDH8Q9NYR8 311 aa5.11□□□□□ -1.59
PRKDC-211ENST00000546304 FAM96BQ9Y3D0 163 aa5.11□□□□□ -1.59
PRKDC-211ENST00000546304 SOX21Q9Y651 276 aaPredicted RBP5.11□□□□□ -1.59
PRKDC-211ENST00000546304 ANK2Q01484 3957 aa5.11□□□□□ -1.59
PRKDC-211ENST00000546304 STAB1Q9NY15 2570 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 SAA2-SAA4A0A096LPE2 208 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 A0A1W2PPI3 338 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 KRTAP23-1A1A580 65 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 DNAJC9-AS1A6NH13 148 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 LEUTXA8MZ59 168 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 OOSP1A8MZH6 123 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 ITGB1BP1O14713 200 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 GSTZ1O43708 216 aaPredicted RBP5.1□□□□□ -1.59
PRKDC-211ENST00000546304 SAA2P0DJI9 122 aaPredicted RBP5.1□□□□□ -1.59
PRKDC-211ENST00000546304 OR5H8P0DN80 308 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 VSIG10L2P0DP72 767 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 TBPP20226 339 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 NFYAP23511 347 aaPredicted RBP5.1□□□□□ -1.59
PRKDC-211ENST00000546304 PAX6P26367 422 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 HLA-DMAP28067 261 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 HRH1P35367 487 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 CEACAM6P40199 344 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 RAB7AP51149 207 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 ARHGDIBP52566 201 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 ZNF134P52741 427 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 HILS1P60008 231 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 SSBP1Q04837 148 aaKnown RBP5.1□□□□□ -1.59
PRKDC-211ENST00000546304 CDK10Q15131 360 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 SSX2Q16385 188 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 LRRC75BQ2VPJ9 315 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 ACTBL2Q562R1 376 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 PYDC2Q56P42 97 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 CT45A1Q5HYN5 189 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 TPTE2P1Q5T6R2 138 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 CCDC144NLQ6NUI1 221 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 FAM71F2Q6NXP2 309 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 RBMS3Q6XE24 437 aaKnown RBP5.1□□□□□ -1.59
PRKDC-211ENST00000546304 H1FOOQ8IZA3 346 aaPredicted RBP5.1□□□□□ -1.59
PRKDC-211ENST00000546304 LYG1Q8N1E2 194 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 DYNAPQ8N1N2 210 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 OR5AP2Q8NGF4 316 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 OR5H2Q8NGV7 314 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 CT45A3Q8NHU0 189 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 IL17DQ8TAD2 202 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 FAM216AQ8WUB2 273 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 SSMEM1Q8WWF3 244 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 FCAMRQ8WWV6 532 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 SOSTQ9BQB4 213 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 SRRQ9GZT4 340 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 TOLLIPQ9H0E2 274 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 OR2D2Q9H210 308 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 EHFQ9NZC4 300 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 DPM3Q9P2X0 92 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 KLK11Q9UBX7 282 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 MTFP1Q9UDX5 166 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 ZNF107Q9UII5 783 aaPredicted RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms