RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 OR5H2Q8NGV7 314 aa16.64■□□□□ 0.25
SCARB1-211ENST00000546215 GIMAP1Q8WWP7 306 aa16.64■□□□□ 0.25
SCARB1-211ENST00000546215 EHFQ9NZC4 300 aa16.64■□□□□ 0.25
SCARB1-211ENST00000546215 V9GYH0 126 aa16.64■□□□□ 0.25
SCARB1-211ENST00000546215 IGKV1D-13A0A0B4J2D9 117 aa16.64■□□□□ 0.25
SCARB1-211ENST00000546215 CT45A6P0DMU7 189 aa16.64■□□□□ 0.25
SCARB1-211ENST00000546215 CT45A5P0DMU8 189 aa16.64■□□□□ 0.25
SCARB1-211ENST00000546215 CT45A7P0DMV0 189 aa16.64■□□□□ 0.25
SCARB1-211ENST00000546215 IGKV1-13P0DP09 117 aa16.64■□□□□ 0.25
SCARB1-211ENST00000546215 LUMP51884 338 aaPredicted RBP16.64■□□□□ 0.25
SCARB1-211ENST00000546215 ACTBP60709 375 aa16.64■□□□□ 0.25
SCARB1-211ENST00000546215 ACTG1P63261 375 aa16.64■□□□□ 0.25
SCARB1-211ENST00000546215 LSAMPQ13449 338 aa16.64■□□□□ 0.25
SCARB1-211ENST00000546215 ZNF660Q6AZW8 331 aaPredicted RBP16.64■□□□□ 0.25
SCARB1-211ENST00000546215 DHRS11Q6UWP2 260 aa16.64■□□□□ 0.25
SCARB1-211ENST00000546215 C5orf30Q96GV9 206 aa16.64■□□□□ 0.25
SCARB1-211ENST00000546215 C19orf24Q9BVV8 132 aa16.64■□□□□ 0.25
SCARB1-211ENST00000546215 RAB18Q9NP72 206 aa16.64■□□□□ 0.25
SCARB1-211ENST00000546215 SDHAF2Q9NX18 166 aa16.64■□□□□ 0.25
SCARB1-211ENST00000546215 RNF212BA8MTL3 300 aa16.63■□□□□ 0.25
SCARB1-211ENST00000546215 IGKV1D-33P01593 117 aa16.63■□□□□ 0.25
SCARB1-211ENST00000546215 IGKV1-33P01594 117 aa16.63■□□□□ 0.25
SCARB1-211ENST00000546215 AADACP22760 399 aa16.63■□□□□ 0.25
SCARB1-211ENST00000546215 ETV6P41212 452 aa16.63■□□□□ 0.25
SCARB1-211ENST00000546215 RELBQ01201 579 aa16.63■□□□□ 0.25
SCARB1-211ENST00000546215 SSBP1Q04837 148 aaKnown RBP16.63■□□□□ 0.25
SCARB1-211ENST00000546215 CNPY1Q3B7I2 92 aa16.63■□□□□ 0.25
SCARB1-211ENST00000546215 RBMXL1Q96E39 390 aaKnown RBP16.63■□□□□ 0.25
SCARB1-211ENST00000546215 MDFIQ99750 246 aa16.63■□□□□ 0.25
SCARB1-211ENST00000546215 C1RLQ9NZP8 487 aa16.63■□□□□ 0.25
SCARB1-211ENST00000546215 RBMX2Q9Y388 322 aaKnown RBP16.63■□□□□ 0.25
SCARB1-211ENST00000546215 GSTZ1O43708 216 aaPredicted RBP16.62■□□□□ 0.25
SCARB1-211ENST00000546215 PPYP01298 95 aa16.62■□□□□ 0.25
SCARB1-211ENST00000546215 CRYBA1P05813 215 aa16.62■□□□□ 0.25
SCARB1-211ENST00000546215 HKR1P10072 659 aa16.62■□□□□ 0.25
SCARB1-211ENST00000546215 HES1Q14469 280 aa16.62■□□□□ 0.25
SCARB1-211ENST00000546215 DHRS7BQ6IAN0 325 aaPredicted RBP16.62■□□□□ 0.25
SCARB1-211ENST00000546215 RBM14Q96PK6 669 aaKnown RBP16.62■□□□□ 0.25
SCARB1-211ENST00000546215 IGLV2-14P01704 120 aa16.61■□□□□ 0.25
SCARB1-211ENST00000546215 LINC00205P59089 165 aa16.61■□□□□ 0.25
SCARB1-211ENST00000546215 ZNF79Q15937 498 aa16.61■□□□□ 0.25
SCARB1-211ENST00000546215 ZNF645Q8N7E2 425 aa16.61■□□□□ 0.25
SCARB1-211ENST00000546215 DRAXINQ8NBI3 349 aaPredicted RBP16.61■□□□□ 0.25
SCARB1-211ENST00000546215 EAF1Q96JC9 268 aaPredicted RBP16.61■□□□□ 0.25
SCARB1-211ENST00000546215 M0R1X1 148 aa16.6■□□□□ 0.25
SCARB1-211ENST00000546215 OR2F2O95006 317 aa16.6■□□□□ 0.25
SCARB1-211ENST00000546215 CD3DP04234 171 aa16.6■□□□□ 0.25
SCARB1-211ENST00000546215 PTBP1P26599 531 aaKnown RBP eCLIP16.6■□□□□ 0.255e-7■■■■■ 52.1
SCARB1-211ENST00000546215 HNF4GQ14541 408 aa16.6■□□□□ 0.25
SCARB1-211ENST00000546215 SPANXN2Q5MJ10 180 aa16.6■□□□□ 0.25
SCARB1-211ENST00000546215 VAX1Q5SQQ9 334 aa16.6■□□□□ 0.25
SCARB1-211ENST00000546215 GLDNQ6ZMI3 551 aaPredicted RBP16.6■□□□□ 0.25
SCARB1-211ENST00000546215 C16orf82Q7Z2V1 217 aa16.6■□□□□ 0.25
SCARB1-211ENST00000546215 Q8N6K4 173 aa16.6■□□□□ 0.25
SCARB1-211ENST00000546215 TMEM229BQ8NBD8 167 aa16.6■□□□□ 0.25
SCARB1-211ENST00000546215 OR5AN1Q8NGI8 311 aa16.6■□□□□ 0.25
SCARB1-211ENST00000546215 OR2T10Q8NGZ9 312 aa16.6■□□□□ 0.25
SCARB1-211ENST00000546215 SLC25A33Q9BSK2 321 aa16.6■□□□□ 0.25
SCARB1-211ENST00000546215 ZNF107Q9UII5 783 aaPredicted RBP16.6■□□□□ 0.25
SCARB1-211ENST00000546215 TMEM89A2RUT3 159 aa16.6■□□□□ 0.25
SCARB1-211ENST00000546215 SLC22A5O76082 557 aa16.6■□□□□ 0.25
SCARB1-211ENST00000546215 MOSP00540 346 aa16.6■□□□□ 0.25
SCARB1-211ENST00000546215 TMEM11P17152 192 aa16.6■□□□□ 0.25
SCARB1-211ENST00000546215 ACTBL2Q562R1 376 aa16.6■□□□□ 0.25
SCARB1-211ENST00000546215 ZNF383Q8NA42 475 aa16.6■□□□□ 0.25
SCARB1-211ENST00000546215 ZNF2Q9BSG1 426 aaPredicted RBP16.6■□□□□ 0.25
SCARB1-211ENST00000546215 OR5H14A6NHG9 310 aa16.59■□□□□ 0.25
SCARB1-211ENST00000546215 H0YJW9 148 aa16.59■□□□□ 0.25
SCARB1-211ENST00000546215 M0QYG6 137 aa16.59■□□□□ 0.25
SCARB1-211ENST00000546215 NDUFA7O95182 113 aa16.59■□□□□ 0.25
SCARB1-211ENST00000546215 CD74P04233 296 aa16.59■□□□□ 0.25
SCARB1-211ENST00000546215 TBPP20226 339 aa16.59■□□□□ 0.25
SCARB1-211ENST00000546215 TAS2R19P59542 299 aa16.59■□□□□ 0.25
SCARB1-211ENST00000546215 PYDC2Q56P42 97 aa16.59■□□□□ 0.25
SCARB1-211ENST00000546215 Q6ZSV7 163 aa16.59■□□□□ 0.25
SCARB1-211ENST00000546215 OR6F1Q8NGZ6 308 aa16.59■□□□□ 0.25
SCARB1-211ENST00000546215 SECTM1Q8WVN6 248 aa16.59■□□□□ 0.25
SCARB1-211ENST00000546215 TINAGL1Q9GZM7 467 aaPredicted RBP16.59■□□□□ 0.25
SCARB1-211ENST00000546215 TSPAN9O75954 239 aa16.58■□□□□ 0.24
SCARB1-211ENST00000546215 FXYD4P59646 89 aa16.58■□□□□ 0.24
SCARB1-211ENST00000546215 MOB3AQ96BX8 217 aa16.58■□□□□ 0.24
SCARB1-211ENST00000546215 AKR1E2Q96JD6 320 aa16.58■□□□□ 0.24
SCARB1-211ENST00000546215 AMY1AP04745 511 aa16.57■□□□□ 0.24
SCARB1-211ENST00000546215 AMY2AP04746 511 aa16.57■□□□□ 0.24
SCARB1-211ENST00000546215 MC5RP33032 325 aa16.57■□□□□ 0.24
SCARB1-211ENST00000546215 DUTP33316 252 aaKnown RBP16.57■□□□□ 0.24
SCARB1-211ENST00000546215 RAG2P55895 527 aa16.57■□□□□ 0.24
SCARB1-211ENST00000546215 HERV-K104P61576 105 aa16.57■□□□□ 0.24
SCARB1-211ENST00000546215 TSPAN5P62079 268 aa16.57■□□□□ 0.24
SCARB1-211ENST00000546215 RNASE10Q5GAN6 216 aaKnown RBP16.57■□□□□ 0.24
SCARB1-211ENST00000546215 Q8N402 240 aa16.57■□□□□ 0.24
SCARB1-211ENST00000546215 OR4D10Q8NGI6 311 aa16.57■□□□□ 0.24
SCARB1-211ENST00000546215 RITA1Q96K30 269 aa16.57■□□□□ 0.24
SCARB1-211ENST00000546215 THAP7Q9BT49 309 aaPredicted RBP16.57■□□□□ 0.24
SCARB1-211ENST00000546215 NPFFR1Q9GZQ6 430 aa16.57■□□□□ 0.24
SCARB1-211ENST00000546215 SLC5A7Q9GZV3 580 aa16.57■□□□□ 0.24
SCARB1-211ENST00000546215 CCL28Q9NRJ3 127 aa16.57■□□□□ 0.24
SCARB1-211ENST00000546215 PLSCR3Q9NRY6 295 aa16.57■□□□□ 0.24
SCARB1-211ENST00000546215 CSF1P09603 554 aa16.56■□□□□ 0.24
SCARB1-211ENST00000546215 BLCAPP62952 87 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms